Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0037 ATGGAGTCTCGCTGCTTTGCTGCTACTACTGGATCTATTGCCGCCAAGCTTAGCAGTTTCACCATCTTACTTCTTTTTCTACTATCTTTCTTCACTTTTACTCCGACCGAAGCATATGATGCGCTTGATCCGACCGGTAATATCACAATCAAATGGGATGTCATGAGCTGGACTCCAGATGGTTATGTTGCTGTTGTCACAATGTACAACTTCCAGCAATATCGTCACATTCAAGCTCCAGGGTGGACATTGGGCTGGACATGGGCTAAGAAGGAAGTAATCTGGAGCATGGTAGGTAGCCAAACAACAGAGCAAGGAGATTGTTCCAGATTCAAAGGAAACATCCCTCATTGCTGTAAGAAAGATCCAACGGTCGTAGATTTACTGCCTGGAACGCCTTACAACCAGCAGATTGCCAATTGCTGCAAAGGTGGGGTCATTAACTCGTGGGCCCAAGATCCATCCAATGCCGTTAGTTCCTTTCAGGTCAGTGTTGGTGCGGCGGGAACAACTAACAAAACTGTCAGACTGCCTAAAAACTTCACTCTTAAAGCTCCTGGTCCTGGATATACTTGTGGGCCCGCAAAGATTGTGAAACCAACTAGATTTATAACTGCCGATAACAGGAGAGCCACTCAAGCTCTGATGACATGGAATGTTACTTGCACTTATTCACAATTTCTTGCCCAAAAGACACCCACCTGTTGTGTATCGCTTTCTTCCTTCTATAACGATACCGTTGTGAACTGCCCAACCTGTAGCTGTGGCTGTCAGAACAACATTACAGAACCCGGAAGTTGTGTAGACCCAGATTCTCCTTATTTAAGGTCGGTTGTATCTGGTTCGGGAAAATCAAGTAATACACCTTTAGTTCAGTGTACTAGCCATATGTGCCCCATCCGAATTCATTGGCACGTTAAGATCAATTACAAGGAGTACTGGAGGGTGAAGATCACTATCACTAATTTCAATTACAGAATGAACTATACACAGTGGAATCTTGTCGTGCAACACCCCAATTTTGATAACTTGACCCAGTTATTCAGCTTTAATTACAAGTCATTAACTCCATATGTCGGCTTAAATGATACTGCAATGTTATGGGGAGTCAAGTTCTACAACGACTTCCTTTCACAGGCAGGCCCTCTGGGCAACGTGCAATCAGAGCTCCTTTTCCGAAAGGACAAGAATACTTTTACTTTTGACAAGGGTTGGGCTTTTCCAAGAAGAATTTATTTCAACGGTGATAACTGTGTGATGCCACCACCCGATGCATATCCGTGGTTACCGAATTCCGGGCCCCGGCATATCATTTCTCTTTTTAGTTCCACCATAACCGTCTTGGCATCTTTGATATTCCTATTGGCTTTTGCATAA 1377 44.01 MESRCFAATTGSIAAKLSSFTILLLFLLSFFTFTPTEAYDALDPTGNITIKWDVMSWTPDGYVAVVTMYNFQQYRHIQAPGWTLGWTWAKKEVIWSMVGSQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCKGGVINSWAQDPSNAVSSFQVSVGAAGTTNKTVRLPKNFTLKAPGPGYTCGPAKIVKPTRFITADNRRATQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTVVNCPTCSCGCQNNITEPGSCVDPDSPYLRSVVSGSGKSSNTPLVQCTSHMCPIRIHWHVKINYKEYWRVKITITNFNYRMNYTQWNLVVQHPNFDNLTQLFSFNYKSLTPYVGLNDTAMLWGVKFYNDFLSQAGPLGNVQSELLFRKDKNTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNSGPRHIISLFSSTITVLASLIFLLAFA 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 253809 256639 - Conep19aG0004000.1 Cone19ag0037 458474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0037 458 PIRSF COBRA 11 458 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cone19ag0037 458 Pfam COBRA-like protein 62 225 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Cone19ag0037 458 PANTHER PROTEIN COBRA 26 448 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0029 Cone-Chr13:179997 Cone19ag0037 Cone-Chr19:253809 0 dispersed
Cone16ag0514 Cone-Chr16:7173152 Cone19ag0037 Cone-Chr19:253809 2.58E-52 dispersed
Cone18ag1145 Cone-Chr18:8250218 Cone19ag0037 Cone-Chr19:253809 5.36E-141 dispersed
Cone19ag0037 Cone-Chr19:253809 Cone3ag0918 Cone-Chr3:4716767 3.90E-161 dispersed
Cone3ag1493 Cone-Chr3:33556323 Cone19ag0037 Cone-Chr19:253809 4.71E-137 transposed
Cone13ag0028 Cone-Chr13:177797 Cone19ag0037 Cone-Chr19:253809 9.96E-228 wgd
Cone19ag0037 Cone-Chr19:253809 Cone2ag0494 Cone-Chr2:2677819 5.48E-243 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0037 - - - 0.0