Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0058 ATGGGGGGAGAGCACTCGCTTATAGTTCTCTTCATTTTCATTATTAACCTCTCAAGCTTTGCTTTTACACAAGATGGTGGTAATGAGTTTACTCATCCCAGTTTTCCTCCTTTCTCTCCTCCTGATAACTATCTCATTGATTGCGGGTCCCCTCAACAAACCCATCTCGATGATGGAAGAACTTTCAAGTCTGACCATGATGCTTCATCTCTTCTTTCCACTGATGAAGATGTCATAGCTTCTTCCATTGATTCTATTTCAATAAACACTTCTTCTTTTTCTTCTTTGCCTCTGTTCCAAACCGCGAGAATATTCCCTGAGGAATCCACCTACAGCTTCTACATTTCTCAGCCCGGGCGGCACTGGGTCCGGCTTTACTTTTACCCTCTTCCACACGAAAAGTATAATCTTTTGGGTTCGATTTTCACCGTCACGGCAGAATCTTTTGCTCTTCTGCACGACTTTTCAGTGAATGACAACACTAATTTGGTGTTCAAGGAGTACTTGATCAATGTTACTCGTGATAGATTCTCCATCCAATTCAAACCGAAGAAGAATTCATACGCTTTCATCAATGCCATTGAAGTTGTTTCAACCCCAGAATCTCTCATCTCTGATTCCGCATCTTCAATCTCACCATTCGGAACTTTTAATGGGTTATCAAATTATGCTCTAGAAGTTTCCTATCGTGTGAATGTAGGCGGGCCTGGTTTAACCTCGAAAAATGATACATTGTCAAGAACATGGGAATCGGATTACTTGTACAACAAGTTTCCTCAAGGGTCTAAGAATGTGTCAATTTCTCCGAAAAGTGTGAAATATCCCAGGAATTCGGTTACTCCGTTGATCGCTCCGAATTGGGTTTATGCCACGGCACAAGATATGCAAGATCCTGTTACGATGCAAGTCAACTTCAATCTCACTTGGAAATTTACCGTGGAGCCGAGTTATTCTTATTGGATAAGGCTTCATTTTTGTGATATTGTAAGCAGGGCCTTAAACGATTTATACTTTAATGTCTATATCAATGGCATGATTGGTGCAGCCGCTCTTGATCTTTCTACACTCACCGGAGCTCTTTCCACCCCTTACTACAAAGATTTTGTTGTAAATGCCTCGAATATCGTAAACTCTACTATAGAGATTCAAGTGGGTCCGTCAAATCTCCAGTCTGGGGCTCAAGATGCAATTCTTAACGGTTTGGAGATCATGAAAATGAGCAATGGAGCCAAGAGCTTGGATGGTTTATTCATGGTCGAAGGGACCTACATGGGAGGTCCAGGAATGAATCGAATGAAAGTTATAGCTGCAATTGGCCTTGGAATGGGGATCATGGCATTGGCGATGCTCGGGCTAGTTTGTTGCCAATGGAGAAAAAGACCTCAAGGTTGGGAGAAAAGGAAAAGCTTTTCTTCATGGCTTCTTCCATTACATGATAGTTGTAACTCTACCTTCATGTCAAGAAAATCGACCGTTTTTGGATCCCGTAGAAGCAAGAGCGGTTACTCGGGCATATACACCAACGCTAGTATGGGCCGGTTCTTCCCATTTTACGAGCTGCAAAACGCAACGCAAAATTTCAATGAGAAGGCTGTGATTGGTGTTGGTGGGTTTGGAAAAGTGTATCTTGGAGCGCTTGAAGATGGAACCAAGCTTGCGATAAAACGCGGAAACCCGAGTTCTGAACAAGGCATAAACGAATTCCGAACGGAAATAGAAATGCTCTCCAAGCTCCGTCATCGCCACCTCGTCTCTCTCATCGGTTTTTGCGACGAACAATCCGAAATGATCCTTGTCTACGAATACATGTCTAACGGACCGCTTCGTGATCATTTATATGGTTCAAGCCTTCCTCCATTATCATGGCAACAAAGGCTCGAGATATGCATTGGAGCGGCTCGAGGACTACACTATCTTCATACAGGTGCGGCCCAAGGAATAATCCACCGTGATGTGAAAACAACAAACATACTCTTAGATGAGAATTTCGTGGCCAAAGTTTCCGATTTCGGTCTTTCAAAAACTGGACCATCTTTAGAGCAAACTCATGTAAGTACAGCGGTTAAAGGTAGTTTTGGTTATCTTGATCCCGAGTACTTCAGAAGGCAACAGTTAACCGAAAAATCAGATGTGTACTCATTTGGGGTTGTGCTTTTCGAAGTTTTGTGTGCAAGGCAAGCTATAAACCCCGCATTGCATAGAGAGCAAGTGAACTTGGCTGAATATGCTATGAGTTGTCATAAAAAGGGGGTGCTCGAGAAGCTTATTGACCCGAAAATCATGGGGTTGCTGAGTAAAGAGTCTTTGAGGAAGTATGTGGAAGCGGCAGAGAAATGTTTGGCTGAGCATGGGGTTGATAGGCCCGGGATGGGAGACGTGCTATGGAACTTGGAGTATGCTTTACAGCTTCAAGAATCTGAGGTAGGGAATGGTGATACTGGGTTGGAAGAGAAGAGTGGTGATAAGGTTAAGTTGAAGACAGAGAATGAAGAAGAAGATGAAACAGTAAGTATTATAGGTTGTGGTGGTGGTGGTAGGTTGGATTCTGGTGCTGGTGTGAGTGATGGTTCTGCAATTGGTTCTCCTTTGTTTTCTAAGCTTGAAAATTTTCAAGGAAGGTAA 2622 43.06 MGGEHSLIVLFIFIINLSSFAFTQDGGNEFTHPSFPPFSPPDNYLIDCGSPQQTHLDDGRTFKSDHDASSLLSTDEDVIASSIDSISINTSSFSSLPLFQTARIFPEESTYSFYISQPGRHWVRLYFYPLPHEKYNLLGSIFTVTAESFALLHDFSVNDNTNLVFKEYLINVTRDRFSIQFKPKKNSYAFINAIEVVSTPESLISDSASSISPFGTFNGLSNYALEVSYRVNVGGPGLTSKNDTLSRTWESDYLYNKFPQGSKNVSISPKSVKYPRNSVTPLIAPNWVYATAQDMQDPVTMQVNFNLTWKFTVEPSYSYWIRLHFCDIVSRALNDLYFNVYINGMIGAAALDLSTLTGALSTPYYKDFVVNASNIVNSTIEIQVGPSNLQSGAQDAILNGLEIMKMSNGAKSLDGLFMVEGTYMGGPGMNRMKVIAAIGLGMGIMALAMLGLVCCQWRKRPQGWEKRKSFSSWLLPLHDSCNSTFMSRKSTVFGSRRSKSGYSGIYTNASMGRFFPFYELQNATQNFNEKAVIGVGGFGKVYLGALEDGTKLAIKRGNPSSEQGINEFRTEIEMLSKLRHRHLVSLIGFCDEQSEMILVYEYMSNGPLRDHLYGSSLPPLSWQQRLEICIGAARGLHYLHTGAAQGIIHRDVKTTNILLDENFVAKVSDFGLSKTGPSLEQTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLCARQAINPALHREQVNLAEYAMSCHKKGVLEKLIDPKIMGLLSKESLRKYVEAAEKCLAEHGVDRPGMGDVLWNLEYALQLQESEVGNGDTGLEEKSGDKVKLKTENEEEDETVSIIGCGGGGRLDSGAGVSDGSAIGSPLFSKLENFQGR 873
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 370210 372970 - Conep19aG0006200.1 Cone19ag0058 458495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0058 873 ProSiteProfiles Protein kinase domain profile. 527 800 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0058 873 SMART serkin_6 527 800 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0058 873 Pfam Protein tyrosine and serine/threonine kinase 530 736 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0058 873 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524(InterPro)
Cone19ag0058 873 FunFam Receptor-like protein kinase FERONIA 224 408 - -
Cone19ag0058 873 Gene3D Phosphorylase Kinase; domain 1 490 602 - -
Cone19ag0058 873 Gene3D Transferase(Phosphotransferase) domain 1 603 819 - -
Cone19ag0058 873 CDD STKc_IRAK 533 798 - -
Cone19ag0058 873 PANTHER OS07G0166700 PROTEIN 516 805 IPR045272 GO:0004672(PANTHER)|GO:0004714(InterPro)|GO:0005886(PANTHER)|GO:0006468(InterPro)|GO:0009506(PANTHER)|GO:0046777(PANTHER)
Cone19ag0058 873 SUPERFAMILY Protein kinase-like (PK-like) 500 797 IPR011009 -
Cone19ag0058 873 FunFam Receptor-like protein kinase FERONIA 603 819 - -
Cone19ag0058 873 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0058 873 FunFam receptor-like protein kinase FERONIA 490 602 - -
Cone19ag0058 873 Gene3D - 223 408 - -
Cone19ag0058 873 Gene3D - 43 200 - -
Cone19ag0058 873 Pfam Malectin-like domain 46 405 IPR024788 -
Cone19ag0058 873 FunFam Putative receptor-like protein kinase 43 200 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1113 Cone-Chr10:7929352 Cone19ag0058 Cone-Chr19:370210 7.90E-301 dispersed
Cone12ag1168 Cone-Chr12:9274822 Cone19ag0058 Cone-Chr19:370210 3.43E-307 dispersed
Cone19ag0058 Cone-Chr19:370210 Cone8ag1216 Cone-Chr8:10306930 6.05E-303 dispersed
Cone2ag0492 Cone-Chr2:2674490 Cone19ag0058 Cone-Chr19:370210 8.86E-26 dispersed
Cone13ag0055 Cone-Chr13:346670 Cone19ag0058 Cone-Chr19:370210 3.18E-158 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82361 PF13855 LRR_8 2.60E-08 CL0022 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0058 - - - 0.0