Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag0085 | ATGGTACAGGTCAACAAGCTTGAATCTGCAAGAGCTGAAATGGGTGAGGTGAGAGAAGAGAATCAAAGGCTTAAGATGTGTTTGGATCGAGTCATGAAGGATTACCAATCTCTTCAAATGCAATTCCGCAATATTGTTGAACAAGATGTAAAGAAGTCTACTAATGATCGTGATCGAGAAGTTTGTCATGAAGAAACCGAGCTCGTTTCCCTTACTCTCGGAAGATTTCCGAGTGATCGGAAAAGGGAAGAAAATGCGCCCAAGATAATATCTAATACGAATAATCAAGCTGGAAAAGATACTAATAATGATCATCAACAAGTACTATCTCCTAAACAAGACTTGGCTCTTGGACTGGATTGTAAAGTATCTCAAGCATCAAAAAGTTCTCCAAATCAAAGCCCAAGTACTAACAATAGCCTTGATTCAGAAGCAAAGGAAGAAGCTGCTGGAGAAACTTGGCCACCAAGTAAAGTCTTGAAGACAATGAGAAGTAGTGGAGAAGATGCTGAAGTTTATCAACAGAGTACACCCAAGAAAGCTAGGGTTTGTGTGAGAGCTCGATGCGATACTCCGACGATGAACGATGGATGCCAATGGAGAAAATACGGGCAAAAGATCGCGAAAGGAAACCCGTGCCCTAGAGCTTACTATCGTTGCACGGGAGCACCGTCATGTCCGGTTAGAAAACAGGTTCAAAGATGCGCGGATGATATGTCCATCTTAATTACGACCTACGAAGGTACTCACAACCATCCGCTACCTGTTTCGGCAACGAGAATGGCATCCACCACTTCCGCCGCCGCATCCATGCTATTATCTGGTTCCTCAACCTCTCGAGCTGATCAGAACACTGCCGTAGCCACCGGTCTCCAAGGATTGAGTTATTACCTTTCCGATAATTCGAATTCAAGACAATTCTACTTGCCTAATTCTTCCATGGTGTCATCTTCCTCTCCCACACACCCAACAATCACATTAGACCTTACTTCAAACCCATCTTCTTCATCATCTTCATTATCATCTTCTACTCATTTTAACAATTTTTCTTCACCTAATTATTATAACTACCCTCCAAGATATCCCTTCACAAACCTCGACTTTGGTTCTAATCCTCAATCAAACAATATGATGTCTTGGAGCAATGGTCTCATGGGTTATAATAATAGAAACCAAATAGGCACTAGTACCCTACAAAACAGCATTTACCAAAGCTACCTACAAAAGAATAGTAACCCCAATTTTCATCCTCCTCGTCCTCAACAACCTCCACTGGATACTATTGCGGCTGCAACTAAGGCAATCACGGCCGACCCTAGTTTCCAATCAGCTTTAGCTGCTGCCCTGACATCCATCATTGGTAACAGTAGTGGCAGCAGTGGTAGTGGCAGTGCGGTAGTTGGAAGTACTCAAGGTGGTGGAGATGGTTTTGGTCAAAAGAATAAGTTGGGAGAGCCATTTTCACTATCACCATCCACGTACACGAATCAGAGTGCAGCTAAAGGGAATGCTTGTGCATCAAGTTTTTTAAGCAAAGCACCATCTTCAGCAGCGAATTCTCAGTCGGGAAACTTGGTATTTCTTGCCCCGAATAATTCGTTGCCGTTCTCCACATCCAAAAGTTCGTCGGAATCTCCTACCGATAATAGAGACCAAACAAGTTAA | 1665 | 43.0 | MVQVNKLESARAEMGEVREENQRLKMCLDRVMKDYQSLQMQFRNIVEQDVKKSTNDRDREVCHEETELVSLTLGRFPSDRKREENAPKIISNTNNQAGKDTNNDHQQVLSPKQDLALGLDCKVSQASKSSPNQSPSTNNSLDSEAKEEAAGETWPPSKVLKTMRSSGEDAEVYQQSTPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPSCPVRKQVQRCADDMSILITTYEGTHNHPLPVSATRMASTTSAAASMLLSGSSTSRADQNTAVATGLQGLSYYLSDNSNSRQFYLPNSSMVSSSSPTHPTITLDLTSNPSSSSSSLSSSTHFNNFSSPNYYNYPPRYPFTNLDFGSNPQSNNMMSWSNGLMGYNNRNQIGTSTLQNSIYQSYLQKNSNPNFHPPRPQQPPLDTIAAATKAITADPSFQSALAAALTSIIGNSSGSSGSGSAVVGSTQGGGDGFGQKNKLGEPFSLSPSTYTNQSAAKGNACASSFLSKAPSSAANSQSGNLVFLAPNNSLPFSTSKSSSESPTDNRDQTS | 554 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 498410 | 500330 | - | Conep19aG0009100.1 | Cone19ag0085 | 458522 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag0085 | 554 | SMART | WRKY_cls | 194 | 254 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone19ag0085 | 554 | MobiDBLite | consensus disorder prediction | 124 | 155 | - | - | |
Cone19ag0085 | 554 | ProSiteProfiles | WRKY domain profile. | 189 | 255 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone19ag0085 | 554 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 6 | 457 | IPR044810 | GO:0003700(InterPro) | |
Cone19ag0085 | 554 | MobiDBLite | consensus disorder prediction | 535 | 554 | - | - | |
Cone19ag0085 | 554 | MobiDBLite | consensus disorder prediction | 457 | 496 | - | - | |
Cone19ag0085 | 554 | Gene3D | WRKY domain | 179 | 256 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone19ag0085 | 554 | MobiDBLite | consensus disorder prediction | 73 | 106 | - | - | |
Cone19ag0085 | 554 | Coils | Coil | 7 | 27 | - | - | |
Cone19ag0085 | 554 | FunFam | probable WRKY transcription factor 31 | 179 | 256 | - | - | |
Cone19ag0085 | 554 | Pfam | WRKY DNA -binding domain | 195 | 253 | IPR003657 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone19ag0085 | 554 | MobiDBLite | consensus disorder prediction | 88 | 106 | - | - | |
Cone19ag0085 | 554 | MobiDBLite | consensus disorder prediction | 124 | 144 | - | - | |
Cone19ag0085 | 554 | SUPERFAMILY | WRKY DNA-binding domain | 187 | 255 | IPR036576 | GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro) | |
Cone19ag0085 | 554 | MobiDBLite | consensus disorder prediction | 319 | 343 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag0085 | Cone-Chr19:498410 | Cone3ag1328 | Cone-Chr3:32232091 | 1.06E-48 | dispersed | |
Cone4ag1749 | Cone-Chr4:12857921 | Cone19ag0085 | Cone-Chr19:498410 | 2.84E-12 | dispersed | |
Cone19ag0085 | Cone-Chr19:498410 | Cone1ag0014 | Cone-Chr1:120101 | 1.31E-55 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45264 | PF00249 | Myb_DNA-binding | 2.50E-14 | CL0123 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag0085 | - | - | - | 0.0 |