Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0097 ATGGGGCATAAGAAGAAAAACGTTGCTCCGCGCTCAAAACAATCTCCGGTGGCGGCTGAAGCGACCGCACGGGGTGTTGCTGGCGATGGTTCAGGTGTGGCGCAATCTGACTGCTCCCCGAAACCTAGTGATGGTAACAGTAATCATCATCCCGTTCAGAACCAAGCCAATAATATGATCGAGCCGTTGATTAGAAATGAATCTGACGGCGGTTCGTCTTACTCCGCAATCAAGCTCGAATGTGAACGGGCTCTCACAGCGCTTCGACGGGGGAACCACACTAAGGCACTGAGGCTTATGAAGGAATTATGCTCTAAGAATGAGAACTCAGCTCACTGGGCATTGATTCATCGTGTTCAAGGTACTGTATGTGTTAAAGTGGCGTCGATTATTGACGATCCCAACGCAAAGCAGAGGTATTTGAGAAACGCTATCGAGTCTGCTCGTAAAGCCGTTGAGCTTTCTCCAAACTCGATTGAATTTGCTCATTTCTATGCCAATTTGCTCTACGAGGCTGCTAATGATGGGAGGGAGTATGAAGAGGTGCTGCAAGAGTGTGAACGGGCTCTAGCGATTGAAAACCCGATCGATCCTGCGAAGGAGAGTTTGCAGGATGAAAAGCAGCAGAAGATACCTACTGCTGAAGCAAGAATAGCTCATGTGAAGAATGAATTGCAGCAGCTGGTTCAGAAGTCTAACATTTCTTCACTATCATCTTGGATGAAGAATTTGGGATCTGGGGAGGAGAAGTTTAGGTTGATTCCGATAAGAAGGGTGACAGAGGACCCGATGGAGATGCGGACAGTTCAGACTAGGAGGCCGAATGAGATTAAGAAGGCCACCAAGACGCCTGAGGAGCGGAGGAAGGAGGTTGAAGTCCGTGTTGCTGCTGCGAGGCTTTTGCAGCAAAAGTCAGAGACTCCACAATTACAGAATGATGGGAATAAGAAGGAGAGGGGGTTGGATTCTTCATCTTCAGGTTCTGGCTTAAGGGGAAGTGAGAGGCGGAGAAATGGAACCAAACACGGGTCTTCAGCAGAGAGGAGGGATTGTGTTCGGCCGTATTGGAATTCGATGAGTATTGATTCGAAGAAAGAGTTGCTTAGGATTAAGATAAGTGGTCTGAAGGCTCATTTTAATGCATCTAAAGATGGTTTGGCAAATGGAGTTTTATCGGAAGCATTGTCGTTTTGTGAGGCGAATAAAACATGGAAGTTCTGGGTATGCTGCAGATGTAATAAGAAATTTGCAGATTCAGAATCTCATATGCACCATGTAGTGCAGGAGCATATGGGGAACCTTTTGCCAAAAATGCAGTCAATTTTGCCACAGAATGTGGATAATGAATGGATTGAGATGCTTCTCAACTGCTCTTGGAAACCAGTAGATGTCTCCGCTGCTATTAAAATGCTCACCAATCGATCAAATTGTAGAGATTCGAAGTTTTCTGAGCATATCTATTCTGCCAATCATAATGAGAGGTTTGATGACTGCCTCAAAGATGCATGGGATTCTTCACCCAACAGGGGAGATTTGGAAAATAGTTGCAATAGTTTTACTGTTGAAAGTAATAGCCACAAAGAAAGTACTGACATTGAGTGTAGAAGTTGTCATGAAGAGCAGGGTTCAACATCTTATTCACTACTTGATAACTGGCCAATATCTGATGACTCTGAGCGGGAGAAGCTTCTTGAAAGAATTCACACAGTATTTGAGTTGCTTATTAGGCATAAATATCTTGCTGCAAGCCATCTGAACAAGGTGATACAATTTACAATGGATGAGTTACAGGGTGTTTTATCTGGTTCTCGGCTTCTAAACAATGGTGTGGACCAAACACCAATCTGTATCTGCTTTCTGGGAGCTTCCCAGCTCAGGAAAATCCTCAAATTCTTGCAAGAATTATCTCATTCTTGTGGTTTGGGTAGATATTCTGATAAAAATAGCAGTCCCATGGATGATGCAAATAGCAGCACTCAAGTTTTGGAGATGAAAGAAAAGATTGTTCTTAATGGGGATGCCTCGTTTCTTCTTCTGGATGAAAGTTTTTTGTCAGCCGAATGTACTTTTGCAGATGTTTTTGCTGCAGCTTCTTCTGCCAAAGTTGTTCAGGCAAATGGGATTCCACCTGAAGGTGATGTTTCATTATCATGGATATTTGCAGGTCCGTCAAGTGGGGAACAATTGGCATCATGGATGCGAACTAACGAAGAAAAAACACAAGAAGGAATAGAAACTCTCCAAATGCTAGAGAAGGAGTTTTACCACCTACAGAGTCTATGTGAGCGAAAATGTGAGCATTTAAGCTACGAGGAAGCATTGGAGGCTGTGGAGGATCTTTGTCTTGAAGAGGGTAAGAAAAGGGAAAATGGGACAGAATTTGTCAATCAAAGCTACGAGTCTATCCTAAGGAAGCGAAGGGATGAACTTATTGAAGCGGAAAATGATGCCATGTTTCTCAGCAGCAGGTTTGAGTTAGATGCTATAACCAATGTTTTGAAAGAAGCAGAAGCCCTGAACATTAACCAAATTGGATACGAGGACAATTATAATGGAGTGACTTCACAATTATGTGACTTGGAATCTGGTTTAGATGAAGATTGGAGAGCCAAGGATTATTTGCATCAAGTTGATACATGTATAGAAGTTGCAATTCAGAGGCAGAAAGAACAGTTATCTGTTGAGATTAGCAAAATTGATGCACGCATGATGCGTAATGTTACTGGAATGCAACAGTTGGAACTTAAGCTTGAGCCTGTGTCTGCCCATGACTATCAGTCAATATTGTTGCCTCTTCTGAAGTCATACTTGAGGGCACATTTGGAGGATTTGGCTGAGAAAGATGCCAAGGAGAGGTCCGATGCCGCAAGAGAGGCGTTTTTAGCAGAACTTGCTCTGGATTCAAAGAAGTCCATCAAAGGAGGAAGTGGTAATTCAAAACATTCTCAGCAAAAGACAAAGGACAAGAAAAAGAACAAGGAGTTTAGGAAAGCCAAAGATTTAAAGGCTAATGGCGGTGTTGAGCGGGATATGCTTCAACATGCGACTCTTGAGGAAGATTTGTCCCCAGTTACACCTGATGGTGACCATCATGGTTCAGATATTACTGCTTCTGAGAATGGGGATGACTTAAAACTACTGGAAGAAGAATTTAGACGCAAAATTGAGCTTGAAGATGAGGAGAGAAAGCTTGAAGAGACTTTGGAATATCAGAGAAGAATAGAGAATGAGGCTAAAGAAAAGCACCTTGCTGAGCAACAAAAGAAATCTGCTCTGATACATACAGAGAAGGTAGCGGTGGGACAGCATGATATTTGCTTAGGGCCTGTTGCTGATAATGAAAATGTGGTCGAGCAGTTTAAACCTTCTGTGTTGGAAGAAAAAGATGCATCTCCAAACAATTTGGAAGGCTTAACTCTAAATGGTTATGCTGTGCATGCTGTTCCTGATATGCAAAATTTTGGTAATACACTCCAGGAAAACATTAAACAAGGTATGCCCAATGGAGATATTCCAGAGAATACTCTGCCATCTTCTGAACGACGAACAGGAAGGAGAGGTAGGCGGCATAAAGGTTCTACTAAATTGCTTGGTGGAAAGCATCAGGTCGTGTCATCTGATATGCAGAATACAGAAGTTGGGAATTCACAGTTTGATAGCCATTCAAAAGAGAAAGGCTTTAGCAGTGACATCATTTTATATAATGGCAGTGCTGTTGTGGGAGACAATAGTACGAAGAATCAGAAACAATCAGAAACAGTGGAGGATGATGAGGAAAGGTTCCAAGCTGATCTTAAGAGAGCTGTGCGCCAAAGCCTTGACACATTCGAAGCACAAAAGAAGTTTCCCTCGCTTTCAAGTTCGAGGGTGCCACGGACAAGCTCAGCTGAAGTGGAGCATTACAATGGTAATTTATCGGATGAAGTTGGTGTAGAAAGTATTCAGGGAGCAGAAGTATTTGGCTCTGGGCTGAAGAATGAAGTTGGTGAATACAATTGCTTTCTTAATGTCATTATTCAGTCGTTATGGAATTTAAAACTGTTTCAAGATGAGTTCCTGAAAAGATCTACATCTGAGCATGTTCACATTGGTGACCCATGTGTTGTCTGTGCACTGTATGAAGTCTTCGCTGCTCTGACCATTGCATCTACAGATACACGAAAAGAAGCAGTTGCCCCATCTTCTCTGAGAATAGCCTTAAGCAACCTTTATCCTTTTAGTAATTTCTTCCAGGAGGGTCAGATGAATGATGCATCCGAAGTTCTGGCAGTGATATTTGACTGCCTTCACCAGTCGTTTGCTTCTAGTTCAAGTGTTTCTGATGCTGATTCTGTTGAAAGCAACTGTATAGGGTCTTCTGATTGTGCAAATGATGCTTGTATAGTTCATTCCATTTTCGGAATGGACATCTTTGAACGAATGAGCTGCTACAGCTGTGGACTAGAGTCCAGGCATCTGAAGTACACTTCCTTTTTCCACAATATAAATGCTAGTGCACTCCGAGCAACAAAGGTTATGTGTGCAGAGAGCTCATTTGACGAGCTTTTGAATATTGTGGAAATGAATCATCAGTTGGCTTGTGATCCAGAAGCTGGTGGGTGCGGAAAGCCCAACTACATCCATCACTTTCTTTCAGCTCCACCACATGTCTTCACAACAGTTGTGGGGTGGCAGAACACATGTGAGAGTGCTGATGATATAGCAGCAACATTGGCTGCTCTAACTACTGAGATAGATATTGGTGTTCTTTATCGTGGTCTGGATCCGAAGAGTATGTACACTTTGGTATCAGTGGTTTGCTACTATGGACAACATTATCATTGTTTTGCCTACACCCATGAGCATGAATGTTGGGTTATGTATGATGATAAAACCGTGAAGGTAATTGGAGGATGGAGCGATGTTCTTTCTATGTGCGAAAGAGGCCATTTGCAACCACAGGTTCTGTTCTATGAAGCTATAAACTAG 4968 42.71 MGHKKKNVAPRSKQSPVAAEATARGVAGDGSGVAQSDCSPKPSDGNSNHHPVQNQANNMIEPLIRNESDGGSSYSAIKLECERALTALRRGNHTKALRLMKELCSKNENSAHWALIHRVQGTVCVKVASIIDDPNAKQRYLRNAIESARKAVELSPNSIEFAHFYANLLYEAANDGREYEEVLQECERALAIENPIDPAKESLQDEKQQKIPTAEARIAHVKNELQQLVQKSNISSLSSWMKNLGSGEEKFRLIPIRRVTEDPMEMRTVQTRRPNEIKKATKTPEERRKEVEVRVAAARLLQQKSETPQLQNDGNKKERGLDSSSSGSGLRGSERRRNGTKHGSSAERRDCVRPYWNSMSIDSKKELLRIKISGLKAHFNASKDGLANGVLSEALSFCEANKTWKFWVCCRCNKKFADSESHMHHVVQEHMGNLLPKMQSILPQNVDNEWIEMLLNCSWKPVDVSAAIKMLTNRSNCRDSKFSEHIYSANHNERFDDCLKDAWDSSPNRGDLENSCNSFTVESNSHKESTDIECRSCHEEQGSTSYSLLDNWPISDDSEREKLLERIHTVFELLIRHKYLAASHLNKVIQFTMDELQGVLSGSRLLNNGVDQTPICICFLGASQLRKILKFLQELSHSCGLGRYSDKNSSPMDDANSSTQVLEMKEKIVLNGDASFLLLDESFLSAECTFADVFAAASSAKVVQANGIPPEGDVSLSWIFAGPSSGEQLASWMRTNEEKTQEGIETLQMLEKEFYHLQSLCERKCEHLSYEEALEAVEDLCLEEGKKRENGTEFVNQSYESILRKRRDELIEAENDAMFLSSRFELDAITNVLKEAEALNINQIGYEDNYNGVTSQLCDLESGLDEDWRAKDYLHQVDTCIEVAIQRQKEQLSVEISKIDARMMRNVTGMQQLELKLEPVSAHDYQSILLPLLKSYLRAHLEDLAEKDAKERSDAAREAFLAELALDSKKSIKGGSGNSKHSQQKTKDKKKNKEFRKAKDLKANGGVERDMLQHATLEEDLSPVTPDGDHHGSDITASENGDDLKLLEEEFRRKIELEDEERKLEETLEYQRRIENEAKEKHLAEQQKKSALIHTEKVAVGQHDICLGPVADNENVVEQFKPSVLEEKDASPNNLEGLTLNGYAVHAVPDMQNFGNTLQENIKQGMPNGDIPENTLPSSERRTGRRGRRHKGSTKLLGGKHQVVSSDMQNTEVGNSQFDSHSKEKGFSSDIILYNGSAVVGDNSTKNQKQSETVEDDEERFQADLKRAVRQSLDTFEAQKKFPSLSSSRVPRTSSAEVEHYNGNLSDEVGVESIQGAEVFGSGLKNEVGEYNCFLNVIIQSLWNLKLFQDEFLKRSTSEHVHIGDPCVVCALYEVFAALTIASTDTRKEAVAPSSLRIALSNLYPFSNFFQEGQMNDASEVLAVIFDCLHQSFASSSSVSDADSVESNCIGSSDCANDACIVHSIFGMDIFERMSCYSCGLESRHLKYTSFFHNINASALRATKVMCAESSFDELLNIVEMNHQLACDPEAGGCGKPNYIHHFLSAPPHVFTTVVGWQNTCESADDIAATLAALTTEIDIGVLYRGLDPKSMYTLVSVVCYYGQHYHCFAYTHEHECWVMYDDKTVKVIGGWSDVLSMCERGHLQPQVLFYEAIN 1655
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 545745 554026 + Conep19aG0010300.1 Cone19ag0097 458534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0097 1655 MobiDBLite consensus disorder prediction 1 53 - -
Cone19ag0097 1655 Coils Coil 211 231 - -
Cone19ag0097 1655 MobiDBLite consensus disorder prediction 267 295 - -
Cone19ag0097 1655 CDD Peptidase_C19 1414 1652 - -
Cone19ag0097 1655 MobiDBLite consensus disorder prediction 36 53 - -
Cone19ag0097 1655 Gene3D Tetratricopeptide repeat domain 73 228 IPR011990 GO:0005515(InterPro)
Cone19ag0097 1655 Pfam Protein of unknown function (DUF627) 84 194 IPR006866 -
Cone19ag0097 1655 MobiDBLite consensus disorder prediction 1023 1042 - -
Cone19ag0097 1655 MobiDBLite consensus disorder prediction 971 1042 - -
Cone19ag0097 1655 MobiDBLite consensus disorder prediction 993 1016 - -
Cone19ag0097 1655 Coils Coil 796 816 - -
Cone19ag0097 1655 SUPERFAMILY TPR-like 83 194 IPR011990 GO:0005515(InterPro)
Cone19ag0097 1655 ProSitePatterns Zinc finger C2H2 type domain signature. 409 430 IPR013087 -
Cone19ag0097 1655 MobiDBLite consensus disorder prediction 1165 1195 - -
Cone19ag0097 1655 MobiDBLite consensus disorder prediction 267 347 - -
Cone19ag0097 1655 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1322 1654 IPR028889 -
Cone19ag0097 1655 PANTHER UBIQUITIN SPECIFIC PROTEINASE 1 1653 IPR052398 -
Cone19ag0097 1655 SUPERFAMILY Cysteine proteinases 1323 1652 IPR038765 -
Cone19ag0097 1655 Coils Coil 1047 1077 - -
Cone19ag0097 1655 Gene3D Cysteine proteinases 1316 1653 - -
Cone19ag0097 1655 Pfam Ubiquitin carboxyl-terminal hydrolase 1323 1651 IPR001394 GO:0004843(InterPro)|GO:0016579(InterPro)
Cone19ag0097 1655 Pfam Protein of unknown function (DUF629) 352 883 IPR006865 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0094 Cone-Chr13:574824 Cone19ag0097 Cone-Chr19:545745 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0097 - - - 0.0