Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag0110 | ATGGTTTCTTCAACTTCTCAGAAGAAATCTCTTCACCCTCTCTTAGCCATCAACCTCGCTAAGCTTACCATCCCTTCTTCTTCTTCTTCACCTCCTAACACTCAACACGACTTCGATTTCTCCGACGTCTTTGGCCCCACTGCCAACTCATCTTCATCCCCGTCCACTTCATTCGCAGGGGACCCACAACAACCTCAAGTGATCCACCACCGGTCCCACTCCCTCGTGGGACCCTCCCCTCGCTTCTCCACTCCCTCCTCTTCCCTCCCCTTCCACCAACCCCATAACCACCTCGATTCCCAATCTGAAGACGAAGAAGAAGAAGGCGAGGAAGATGAATCCGAAACCCTAATTCAAGTTCCAGAATCAAATGAGGAGCTGCAAGTGAACGAGAGTGAAATTCGTGAAGGGAAGAGAGAAACGGTGGGCAAGATCGGGCCTGGAGATTTTGAAATTCTTCGAGTTGTGGGGAAGGGCGCGTTTGGGAAGGTCTTTTTGGTGAGGAGGAAAGGAGAGACAAGTAGTAATAATAATGATGGTGATGGGATTTATGCAATGAAGGTGATGAGGAAGGACACTATCATAAAGAAGAATCATGTGGATTATATGAGAGCTGAGAGAGAGATTCTCTCTAAAGTTGTTAATTCCTTTATTGTCCAGCTCCGCTACTCTTTCCAGACAAAAACCAAGCTTTATTTGATTCTTGATTTCATAAATGGAGGACATCTCTTCTTTCATCTCTACCGGCAAGGGATCTTTAGTGAGGATCAAGCAAGGTTCTATACTGCTGAGATTGTGACTGCTGTTTCGCATCTGCATAAGGCCGGGATCGTCCATAGGGATCTCAAGCCAGAGAATATTCTCATGGATTCTGATGGGCATGTTATGCTAACAGATTTCGGGCTGGCTAAGGAAATTGATGAATCGAGCAGGTCGAATTCGATTTGCGGGACAACAGAATACATGGCTCCAGAAATCTTGCAATCAAAAGGTCACAACAAAGATGCTGATTGGTGGAGTGTTGGGGTTCTCCTGTATGAGATGCTAAGTGGTCAGCCTCCATTTACACATGCTAATAGGAAGAAGCTCCAGGAAAGAATCATCAAAGAGAAAGTAAAACTTCCACCATTCCTCAGCACTGAAGCTCACTCTTTACTCAGAGGATTGCTACAAAAAGAACCCTCTAAAAGATTAGGAAGTGGGCCCACCGGAGGGGACGAGTTAAAAAATCACAAATGGTTCCGACCCATAAATTGGAAGAAATTGGAGGCAAGAGAAGTGCTTCCAAAGTTTAAACCGGACGTGTTCGGAAAAGATTGCACGGCCAATTTCGACCGGTGCTGGACCGCAATGCCGGCAGATGATTCTCCGGCTCCAACCCCAACTGATCAAGGTGAACACTTTCACGGCTATACCTACATTGCCCCAAACCCCTGGCTCTCTTCATCATCTGGATGA | 1458 | 46.43 | MVSSTSQKKSLHPLLAINLAKLTIPSSSSSPPNTQHDFDFSDVFGPTANSSSSPSTSFAGDPQQPQVIHHRSHSLVGPSPRFSTPSSSLPFHQPHNHLDSQSEDEEEEGEEDESETLIQVPESNEELQVNESEIREGKRETVGKIGPGDFEILRVVGKGAFGKVFLVRRKGETSSNNNDGDGIYAMKVMRKDTIIKKNHVDYMRAEREILSKVVNSFIVQLRYSFQTKTKLYLILDFINGGHLFFHLYRQGIFSEDQARFYTAEIVTAVSHLHKAGIVHRDLKPENILMDSDGHVMLTDFGLAKEIDESSRSNSICGTTEYMAPEILQSKGHNKDADWWSVGVLLYEMLSGQPPFTHANRKKLQERIIKEKVKLPPFLSTEAHSLLRGLLQKEPSKRLGSGPTGGDELKNHKWFRPINWKKLEAREVLPKFKPDVFGKDCTANFDRCWTAMPADDSPAPTPTDQGEHFHGYTYIAPNPWLSSSSG | 485 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 615318 | 618717 | + | Conep19aG0011600.1 | Cone19ag0110 | 458547 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag0110 | 485 | SMART | serkin_6 | 150 | 414 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag0110 | 485 | ProSiteProfiles | Protein kinase domain profile. | 150 | 414 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag0110 | 485 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 415 | 483 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag0110 | 485 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 277 | 289 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag0110 | 485 | FunFam | Non-specific serine/threonine protein kinase | 238 | 433 | - | - | |
Cone19ag0110 | 485 | SUPERFAMILY | Protein kinase-like (PK-like) | 148 | 477 | IPR011009 | - | |
Cone19ag0110 | 485 | PANTHER | RIBOSOMAL PROTEIN S6 KINASE | 103 | 477 | - | - | |
Cone19ag0110 | 485 | Gene3D | Phosphorylase Kinase; domain 1 | 149 | 457 | - | - | |
Cone19ag0110 | 485 | CDD | STKc_AGC | 156 | 414 | IPR045270 | GO:0004674(InterPro)|GO:0005524(InterPro) | |
Cone19ag0110 | 485 | MobiDBLite | consensus disorder prediction | 44 | 70 | - | - | |
Cone19ag0110 | 485 | Pfam | Protein kinase C terminal domain | 437 | 473 | IPR017892 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag0110 | 485 | SMART | pkinase_C_6 | 415 | 475 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag0110 | 485 | Gene3D | Transferase(Phosphotransferase) domain 1 | 238 | 433 | - | - | |
Cone19ag0110 | 485 | Pfam | Protein kinase domain | 150 | 414 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag0110 | 485 | MobiDBLite | consensus disorder prediction | 24 | 140 | - | - | |
Cone19ag0110 | 485 | MobiDBLite | consensus disorder prediction | 77 | 96 | - | - | |
Cone19ag0110 | 485 | ProSitePatterns | Protein kinases ATP-binding region signature. | 156 | 187 | IPR017441 | GO:0005524(InterPro) | |
Cone19ag0110 | 485 | MobiDBLite | consensus disorder prediction | 103 | 119 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag1456 | Cone-Chr13:10407120 | Cone19ag0110 | Cone-Chr19:615318 | 5.99E-08 | dispersed | |
Cone19ag0110 | Cone-Chr19:615318 | Cone19ag1459 | Cone-Chr19:9471323 | 7.33E-167 | dispersed | |
Cone19ag0110 | Cone-Chr19:615318 | Cone2ag0168 | Cone-Chr2:895285 | 6.85E-21 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82364 | PF00046 | Homeodomain | 3.50E-17 | CL0123 | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag0110 | K04688 | - | csv:101214867 | 683.33 |