Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0120 ATGGCGATTTCAGTACCGAGCAGGCAGCTATTCATCGATGGCGAATGGAGAGAACCGGTTCTTAAGAAGCGCATCCCTATCATCAGTCCTTCTACTCAGCAAATCATCGGGGATATTCCTGCTGCTACTCCAGAAGATGTGGAGCTAGCAGTTGATGCAGCAAGGAAAGCCCTTACTCGGAATAAGGGGAAAGAGTGGGCCTCTGCTCCTGGATCTGTACGGGCCAAATATTTGCGGGCTATTGCAGCTAAGGTAGCTGAGAGAAAGACCGAGCTAGCAAAACTTGAAGCCATGGATTGTGGAAAACCTCTAGATGAATCTGCATGGGATATAGATGATGTTTCTGGGTGCTTTGAGTACTATGCAGACCTTGCTGAAGGTTTGGATGCAAAGCAAAAGGCTCCTGTTGCCCTCCCTATGGATACATTCACGAGCTATGTTCTTAAGGAACCTATTGGGGTTGTTGGGTTGATTACTCCATGGAACTATCCTCTATTGATGGCTACATGGAAAGTGGCCCCTGCCTTGGCTGCTGGGTGTACGGCAATATTGAAGCCATCTGAATTGGCGTCTATAACCTGTTTGGAGCTGGCTGATATATGTAGAGAAGTGGGTCTTCCCAGAGGCGTGCTCAATATCTTGACTGGATTGGGCCCTGAAGCTGGTGCTCCTTTGGCTTCTCATCCACATGTTGACAAGATTGCATTTACTGGAAGCTCTGCTACTGGGAGCAAGGTCATGCAAGCTGCAGCTCAATTGGTCAAGCCTGTATCAATGGAGCTGGGTGGAAAAAGTCCAATTGTTATTTTTGAGGATGTTGACCTTGACAAGGCTGCTGAATGGACGGCGTTTGGTTGCTTTTGGACAAATGGCCAAATTTGCAGTGCGACTTCCCGTCTCATTGTGCAGGAAAGCATTGCCTCCAAATTTTTGGACAAGCTTGTGAAATTGTGTGAAAACATTAAGATTTCAGATCCTTTGGAAGAAGGTTGTAGGCTTGGTCCTGTGGTTAGTGAAGGACAGTACGAGAAGGTATTGAAGTTTATCGCAATGGCTAAGAGCGAAGGTGCTCATATTTTATCTGGCGGGGCACGTCCAGAGCATCTAAAGAATGGGTTTTTCATTAAACCGACCATCATAACTAATGTTACAAACAGAATGCAAATTTGGAGAGAAGAAGTCTTCGGACCCGTTCTATGTGTTAAAACCTTCGAATCCGAAGAAGAAGCTATTGAATTAGCAAATGACACCCACTATGGGCTAGGCTCTGCTGTGATATCAAATGATCTGGAAAGGTGTGAGCGTGTAGCTAAGGCTTTCCAAGCCGGAATTGTATGGATCAATTGCTCACAGCCGACTTTCTGTCAAGCTCCATGGGGAGGCAAGAAGAGAAGTGGTTTTGGTCGAGAATTAGGAGAATGGGGGCTGGATAATTATCTGAGCGTGAAGCAGGTGACGAGATATACATCGGACGATGCATGGGGTTGGTATCAATCTCCTTCCAAACTCTGA 1512 46.3 MAISVPSRQLFIDGEWREPVLKKRIPIISPSTQQIIGDIPAATPEDVELAVDAARKALTRNKGKEWASAPGSVRAKYLRAIAAKVAERKTELAKLEAMDCGKPLDESAWDIDDVSGCFEYYADLAEGLDAKQKAPVALPMDTFTSYVLKEPIGVVGLITPWNYPLLMATWKVAPALAAGCTAILKPSELASITCLELADICREVGLPRGVLNILTGLGPEAGAPLASHPHVDKIAFTGSSATGSKVMQAAAQLVKPVSMELGGKSPIVIFEDVDLDKAAEWTAFGCFWTNGQICSATSRLIVQESIASKFLDKLVKLCENIKISDPLEEGCRLGPVVSEGQYEKVLKFIAMAKSEGAHILSGGARPEHLKNGFFIKPTIITNVTNRMQIWREEVFGPVLCVKTFESEEEAIELANDTHYGLGSAVISNDLERCERVAKAFQAGIVWINCSQPTFCQAPWGGKKRSGFGRELGEWGLDNYLSVKQVTRYTSDDAWGWYQSPSKL 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 669549 673757 - Conep19aG0012600.1 Cone19ag0120 458557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0120 503 Pfam Aldehyde dehydrogenase family 17 485 IPR015590 GO:0016491(InterPro)
Cone19ag0120 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491(InterPro)
Cone19ag0120 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620(InterPro)
Cone19ag0120 503 SUPERFAMILY ALDH-like 5 488 IPR016161 GO:0016491(InterPro)
Cone19ag0120 503 CDD ALDH_F10_BADH 27 487 - -
Cone19ag0120 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491(InterPro)
Cone19ag0120 503 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 502 - -
Cone19ag0120 503 FunFam Betaine aldehyde dehydrogenase 263 454 - -
Cone19ag0120 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491(InterPro)
Cone19ag0120 503 FunFam NAD/NADP-dependent betaine aldehyde dehydrogenase 12 278 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0064 Cone-Chr17:349486 Cone19ag0120 Cone-Chr19:669549 3.75E-48 dispersed
Cone19ag0120 Cone-Chr19:669549 Cone7ag0693 Cone-Chr7:3928633 2.21E-117 dispersed
Cone12ag0631 Cone-Chr12:5686090 Cone19ag0120 Cone-Chr19:669549 1.06E-116 wgd
Cone13ag0118 Cone-Chr13:701650 Cone19ag0120 Cone-Chr19:669549 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0120 K00130 - mdm:103455259 892.108