Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0123 ATGGCTCGCAGGGTTCTTGATCTCGTCTTTCTCATTGCAATCTTCGTCTATGTTCCATTCTCCACGGAATCAAAGCTCACCCTTGATTATTACATCAAATCATGTCCTGATTTCGAAAAGATCATTCGTGATACTGTCACTGGCAAACAACTAACAAGCCCAACAACTGCGGCCGGAACTCTTCGTGTCTTCTTCCATGATTGCATGGTGGACGGTTGCGATGCATCCGTCCTCATCACCAGCAATTCCTTCCATCGGGCAGAACGTGAATCCGATATAAACCACTCACTCCCTGGTGACGCCTTTGACCTTATTGTTCGTGCTAAAACTCAATTAGAACTGGCATGTCCCGGCATCGTCTCGTGCTCGGATATCTTAGCACAAGCTACAAGAGACCTTGTAACAATGGTTGGTGGCCCATTTTTCAATGTCCGGTTAGGTCGTAAAGATAGTTTCGTATCAGAAGTTTCGCATGTTGAAGGAAATGTGCCGAGAGCAAACCATTCTCTGGATACAATGATAAACATGTTTGCTGCAAAAAAATTTACCATTAAAGAATTGGTTGCTTTATCAGGCAGTCATACAATCGGCTTCTCTCACTGCAAAGAGTTTGCAAATCGTTTGTATAAATTCAACGCAACGACGCCTACTGATCCAGAGATCTATCCCAAATTCGCCGATGCGTTGAAAAAGATGTGCGCTAATTATCTTAAAGACACTGCAATGTCGGCTTTTAACGACGTTATGACACCGGGGAAGTTCGATAACATGTACTTTCTAAATCTAAAGAGAGGGTTAGGGCTTTTGCCGTCGGATCATGTGTTGGTGAAGGATCCTAGGACGAAGCCGTTTGTCGATCTGTACGCGAATGATCAGGGGGTGTTGTTTAGGGACTTTGCTCGTGCAATGGAGAAGCTAAGCGTTATTGGTGTGAAAACAGGTAGAAAAGGAGAGGTAAGGAAGAAGTGTGATGTCTTTAATAATATTAAGACAACCCAACCTTAA 1005 43.68 MARRVLDLVFLIAIFVYVPFSTESKLTLDYYIKSCPDFEKIIRDTVTGKQLTSPTTAAGTLRVFFHDCMVDGCDASVLITSNSFHRAERESDINHSLPGDAFDLIVRAKTQLELACPGIVSCSDILAQATRDLVTMVGGPFFNVRLGRKDSFVSEVSHVEGNVPRANHSLDTMINMFAAKKFTIKELVALSGSHTIGFSHCKEFANRLYKFNATTPTDPEIYPKFADALKKMCANYLKDTAMSAFNDVMTPGKFDNMYFLNLKRGLGLLPSDHVLVKDPRTKPFVDLYANDQGVLFRDFARAMEKLSVIGVKTGRKGEVRKKCDVFNNIKTTQP 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 688592 689596 - Conep19aG0012900.1 Cone19ag0123 458560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0123 334 Pfam Peroxidase 43 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 FunFam Peroxidase 164 306 - -
Cone19ag0123 334 Gene3D Peroxidase, domain 2 164 306 - -
Cone19ag0123 334 PRINTS Plant peroxidase signature 185 197 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 SUPERFAMILY Heme-dependent peroxidases 26 327 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Cone19ag0123 334 CDD secretory_peroxidase 25 326 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone19ag0123 334 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 PRINTS Haem peroxidase superfamily signature 186 201 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 FunFam Peroxidase 29 175 - -
Cone19ag0123 334 PANTHER - 12 327 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 Gene3D - 29 327 - -
Cone19ag0123 334 ProSiteProfiles Plant heme peroxidase family profile. 25 327 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0123 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 186 196 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0901 Cone-Chr16:9346509 Cone19ag0123 Cone-Chr19:688592 3.25E-131 dispersed
Cone19ag0123 Cone-Chr19:688592 Cone8ag0155 Cone-Chr8:800105 2.38E-84 dispersed
Cone13ag0121 Cone-Chr13:713201 Cone19ag0123 Cone-Chr19:688592 1.35E-216 wgd
Cone16ag0126 Cone-Chr16:712587 Cone19ag0123 Cone-Chr19:688592 3.19E-164 wgd
Cone18ag1350 Cone-Chr18:9296925 Cone19ag0123 Cone-Chr19:688592 3.78E-54 wgd
Cone19ag0123 Cone-Chr19:688592 Cone2ag0883 Cone-Chr2:34735984 4.44E-89 wgd
Cone19ag0123 Cone-Chr19:688592 Cone2ag0152 Cone-Chr2:793258 9.25E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0123 K00430 - csv:101220163 485.723