Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0124 ATGGGCGAGTTTTCAGTGCCAAGAAGTATCCTGGAAACAGCCAACTACCCTCCATCCCAAAATACAACATTTCCCATAATGTCGCAGAAGAAGAGAGATCCAGATCATGACGATGAGAATAATGGTGATCATCCAATATTAGAGAACACTAATAATAGTCCTCTTCATGAAGATAAACGTAGAAGATCAGTCCCTCCTCTCAAGAATAAGGTGCTGGAATTCGGGCCTTTGCATATCGTTCAACACTTGGTCGAGCCGATGATTCGGAAAGTCGTGCGAGAGGAAGTTGAATTGGCACTAACAAAACATGTAACAAGCATCAAACGGAATCATGGAAAAGAAGCGAAAAAACTAACCTCTCGTTCGGAGCAGATAATTATCAGAAGCTTGCATCTCAAGTTCGTAAACAATCTTTCTCTCCCTGTGTTTACCGGATCTCGGATCGAAGCAATAGAAAGCTCCGTCTTCAAAGTGGCATTGCTCGATACTCTAACCGGAAGATTTGTCGACCAAGGCCCTGAATCCACAGCCATGGTAGAAATTGTGGTTCTTGAGGGTGATTTTGAGGAAGACAACTGGACAATGGAAGAGTTTAAGAACAACATTGTAAGAGAAAGAGAGGGCAAGAAACCCCTTCTTACAGGAGATTCTGTCTTTTTGAATCTTAAAGATGGGATTGGTTTGATAAATGAGATTTCTTTCACTGATAATTCAAGTTGGACAAGAAGTAGGAAGTTCAAGCTAGGAGCTATGGTTGTTGAGGAAATTAATGGAGTTAGAATTAGAGAAGCAAAGAGTGAAGCTTTTATCGTTAGAGATCACCGTGGAGAACTGTACAAGAAGCATCATCCTCCATCTCTATATGATGAGGTATGGAGACTAGAGAAAATTGGGAAAGATGGAGCTTTTCACAAACGTTTGAGCCAACAAAACGTCAATACAGTCAAGGATTTTCTTACCCTTCTTTTCATAGATCCTCCGAGGCTTAGAAACATTCTGGGAACCGGGATGTCGGCGAAAATGTGGGAAGTAACCGAGGAGCACGCAAGAACATGTGTAATGGATAAGAGAAGGTTCTTGTACAACTCAATATCGTCTTCTTCTTCTCAAGAGACGAAGGGTGTAGTTTTTAATGCTGTTGGGGAAGTTCTGGGACTACTTTCAGATTGCAGCTATGCTCTCATAGATAAGTTGTCTGAACTTGAGAAGTTTGATGCTTGGAACTTAGTTATCTCTGCATTTCAAAACTGGGACAAAGTCCTCTGTTTTGAAGATGAATCCTCTCTACTCAACTACTCTCTTTGCTCTACAAGCTCATCACCCATGGCAGAGCAGGGTTCTACTGTTCACACACGACCCGATGCCTTATCTCCAGATATCATCTCAATCCTTTATTCCATTCCGGGCCCGCAAACCGCAGACAGCACAGGTCTTACTTTCGGGCAGTTTTTGGGTTTCGAAAATCAGCCTGAACATTTGCTCTGTGATATCAACCCTTTCAATCAAGCCTTTTTTGAGCAAGACCATCTGAATTACTTTGACATTGACCTTCACTGCAACTTCAGTTTCGAAACTCAAACTGAAGTTACCGAAGCTCAAAGTAGTGGATGTGCTTACTATTATCTGTGGCAACGAGCTCGGACTAGATGGGCAAAGCTGTTTAGTATAATGAAATGGTTTTCAATAAGGAGGATTGTAGCTGATAGAAGAAGAAGGGCTAACCCAATAATGCAAATATTTAGTTGTGAAAAACTGTAA 1758 41.52 MGEFSVPRSILETANYPPSQNTTFPIMSQKKRDPDHDDENNGDHPILENTNNSPLHEDKRRRSVPPLKNKVLEFGPLHIVQHLVEPMIRKVVREEVELALTKHVTSIKRNHGKEAKKLTSRSEQIIIRSLHLKFVNNLSLPVFTGSRIEAIESSVFKVALLDTLTGRFVDQGPESTAMVEIVVLEGDFEEDNWTMEEFKNNIVREREGKKPLLTGDSVFLNLKDGIGLINEISFTDNSSWTRSRKFKLGAMVVEEINGVRIREAKSEAFIVRDHRGELYKKHHPPSLYDEVWRLEKIGKDGAFHKRLSQQNVNTVKDFLTLLFIDPPRLRNILGTGMSAKMWEVTEEHARTCVMDKRRFLYNSISSSSSQETKGVVFNAVGEVLGLLSDCSYALIDKLSELEKFDAWNLVISAFQNWDKVLCFEDESSLLNYSLCSTSSSPMAEQGSTVHTRPDALSPDIISILYSIPGPQTADSTGLTFGQFLGFENQPEHLLCDINPFNQAFFEQDHLNYFDIDLHCNFSFETQTEVTEAQSSGCAYYYLWQRARTRWAKLFSIMKWFSIRRIVADRRRRANPIMQIFSCEKL 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 690718 693651 + Conep19aG0013000.1 Cone19ag0124 458561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0124 585 MobiDBLite consensus disorder prediction 29 44 - -
Cone19ag0124 585 Pfam Calmodulin binding protein central domain 287 352 IPR046830 -
Cone19ag0124 585 Pfam Calmodulin binding protein-like N-terminal domain 130 274 IPR046831 -
Cone19ag0124 585 PANTHER OS02G0177800 PROTEIN 81 567 IPR012416 GO:0003700(PANTHER)|GO:0005516(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:0080142(PANTHER)
Cone19ag0124 585 Pfam Calmodulin binding protein C-terminal domain 369 420 IPR046829 -
Cone19ag0124 585 MobiDBLite consensus disorder prediction 12 28 - -
Cone19ag0124 585 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0124 Cone-Chr19:690718 Cone6ag1054 Cone-Chr6:6149450 1.15E-101 dispersed
Cone13ag0122 Cone-Chr13:717559 Cone19ag0124 Cone-Chr19:690718 1.45E-283 wgd
Cone16ag0125 Cone-Chr16:706271 Cone19ag0124 Cone-Chr19:690718 5.33E-159 wgd
Cone19ag0124 Cone-Chr19:690718 Cone2ag0885 Cone-Chr2:34752469 8.77E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0124 - - - 0.0