Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag0138 | ATGAAGAAATTGAAGTGGTTTAAGCCAATCTCAATCTTCATTAATGGGAGCAGTAGTAGGCTTGAAAGAAGGCTCTCTTTAGGAGAGTACAAAAGAGCAGAGTCATGGTCAAAGTACTTGGTATCATCTGGTGCAGAGATAAAGGGTGAAGGAGAAGAGGATTGGAGTGCTGACATGTCTCAATTGTTCATTGGCTCCAAATTTGCTTCAGGTAGGCATAGTAGGATCTATAGAGGGATTTATAAACAAAGAGATGTGGCAATTAAGCTTGTAAGCCAGCCTGAAGAAGATGAATGCTTGGCTACTATGCTTGAGAATCAATTCATCTCGGAAGTCGCATTGTTGTTCCGTTTATGCCATCCGAATATCATCACCTTTATTGCAGCTTGTAAGAAACCCCCCGTATTTTGTATCATCACGGAGTTTATGCCTGGGGGCTCATTGAGAAAATTCCTCCATCAACAGGAACCGCATTCTGTCCCACTCAACTTGGTTCTAAAACTAGCACTTGATATCTCACATGGGATGCAATACCTTCATTCTCAAGGAATACTCCATAGGGATCTCAAATCCGAGAATCTATTGCTCGGGGAAGATATGTGTGTGAAGGTTGCGGATTTCGGAATCTCGTGCCTAGAATCTCAATGCGGATTAAAAAATGCAAAGGGATTTACAGGAACTTACCGATGGATGGCACCCGAAATGATCAAAGAGAAAGTCCACACAAAAAAAGTCGATGTTTATAGTTTCGGGATCGTTTTGTGGGAGCTTTTAACAGCATTGACACCGTTTGATAACTTGACTCCTGAACAGGCTGCTTTTGCCGTTTGCCAGAAGAATGCGAGACCGCCGTTGCCACCTAGCTGCCCAAGAGCACTAAGTTGGCTAATCAACAGATGCTGGTCAAGCAATCCGGATAAGAGGCCACATTTTGACAAGATCACATCATTATTGGAGAGCTATGCAGAGTCTCTTGATCAAGACCCGGAATTTTTCACATCCTACAAACCTTCTATATGTCGTAAGATTCTACAACGCATACCGAAATGTATAGCTGGTTAA | 1062 | 42.56 | MKKLKWFKPISIFINGSSSRLERRLSLGEYKRAESWSKYLVSSGAEIKGEGEEDWSADMSQLFIGSKFASGRHSRIYRGIYKQRDVAIKLVSQPEEDECLATMLENQFISEVALLFRLCHPNIITFIAACKKPPVFCIITEFMPGGSLRKFLHQQEPHSVPLNLVLKLALDISHGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGLKNAKGFTGTYRWMAPEMIKEKVHTKKVDVYSFGIVLWELLTALTPFDNLTPEQAAFAVCQKNARPPLPPSCPRALSWLINRCWSSNPDKRPHFDKITSLLESYAESLDQDPEFFTSYKPSICRKILQRIPKCIAG | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 746743 | 749070 | + | Conep19aG0014400.1 | Cone19ag0138 | 458575 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag0138 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 140 | 153 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag0138 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 245 | 267 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag0138 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 226 | 236 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag0138 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 289 | 311 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag0138 | 353 | PRINTS | Tyrosine kinase catalytic domain signature | 178 | 196 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag0138 | 353 | Gene3D | Phosphorylase Kinase; domain 1 | 52 | 143 | - | - | |
Cone19ag0138 | 353 | SMART | serkin_6 | 62 | 322 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag0138 | 353 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 60 | 319 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cone19ag0138 | 353 | ProSiteProfiles | Protein kinase domain profile. | 62 | 322 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone19ag0138 | 353 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 184 | 196 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag0138 | 353 | SUPERFAMILY | Protein kinase-like (PK-like) | 52 | 318 | IPR011009 | - | |
Cone19ag0138 | 353 | CDD | STKc_MAP3K-like | 69 | 318 | - | - | |
Cone19ag0138 | 353 | Pfam | Protein tyrosine and serine/threonine kinase | 65 | 317 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone19ag0138 | 353 | FunFam | Serine/threonine-protein kinase isoform 1 | 52 | 144 | - | - | |
Cone19ag0138 | 353 | Gene3D | Transferase(Phosphotransferase) domain 1 | 145 | 342 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone19ag0138 | Cone-Chr19:746743 | Cone2ag0904 | Cone-Chr2:34854307 | 2.36E-178 | dispersed | |
Cone11ag0120 | Cone-Chr11:540829 | Cone19ag0138 | Cone-Chr19:746743 | 1.76E-64 | wgd | |
Cone13ag0137 | Cone-Chr13:792263 | Cone19ag0138 | Cone-Chr19:746743 | 1.74E-247 | wgd | |
Cone16ag0108 | Cone-Chr16:632936 | Cone19ag0138 | Cone-Chr19:746743 | 3.34E-203 | wgd | |
Cone18ag1359 | Cone-Chr18:9340188 | Cone19ag0138 | Cone-Chr19:746743 | 4.24E-64 | wgd | |
Cone19ag0138 | Cone-Chr19:746743 | Cone2ag0900 | Cone-Chr2:34824127 | 1.85E-65 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82366 | PF04084 | ORC2 | 3.80E-97 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag0138 | - | - | - | 0.0 |