Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0138 ATGAAGAAATTGAAGTGGTTTAAGCCAATCTCAATCTTCATTAATGGGAGCAGTAGTAGGCTTGAAAGAAGGCTCTCTTTAGGAGAGTACAAAAGAGCAGAGTCATGGTCAAAGTACTTGGTATCATCTGGTGCAGAGATAAAGGGTGAAGGAGAAGAGGATTGGAGTGCTGACATGTCTCAATTGTTCATTGGCTCCAAATTTGCTTCAGGTAGGCATAGTAGGATCTATAGAGGGATTTATAAACAAAGAGATGTGGCAATTAAGCTTGTAAGCCAGCCTGAAGAAGATGAATGCTTGGCTACTATGCTTGAGAATCAATTCATCTCGGAAGTCGCATTGTTGTTCCGTTTATGCCATCCGAATATCATCACCTTTATTGCAGCTTGTAAGAAACCCCCCGTATTTTGTATCATCACGGAGTTTATGCCTGGGGGCTCATTGAGAAAATTCCTCCATCAACAGGAACCGCATTCTGTCCCACTCAACTTGGTTCTAAAACTAGCACTTGATATCTCACATGGGATGCAATACCTTCATTCTCAAGGAATACTCCATAGGGATCTCAAATCCGAGAATCTATTGCTCGGGGAAGATATGTGTGTGAAGGTTGCGGATTTCGGAATCTCGTGCCTAGAATCTCAATGCGGATTAAAAAATGCAAAGGGATTTACAGGAACTTACCGATGGATGGCACCCGAAATGATCAAAGAGAAAGTCCACACAAAAAAAGTCGATGTTTATAGTTTCGGGATCGTTTTGTGGGAGCTTTTAACAGCATTGACACCGTTTGATAACTTGACTCCTGAACAGGCTGCTTTTGCCGTTTGCCAGAAGAATGCGAGACCGCCGTTGCCACCTAGCTGCCCAAGAGCACTAAGTTGGCTAATCAACAGATGCTGGTCAAGCAATCCGGATAAGAGGCCACATTTTGACAAGATCACATCATTATTGGAGAGCTATGCAGAGTCTCTTGATCAAGACCCGGAATTTTTCACATCCTACAAACCTTCTATATGTCGTAAGATTCTACAACGCATACCGAAATGTATAGCTGGTTAA 1062 42.56 MKKLKWFKPISIFINGSSSRLERRLSLGEYKRAESWSKYLVSSGAEIKGEGEEDWSADMSQLFIGSKFASGRHSRIYRGIYKQRDVAIKLVSQPEEDECLATMLENQFISEVALLFRLCHPNIITFIAACKKPPVFCIITEFMPGGSLRKFLHQQEPHSVPLNLVLKLALDISHGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGLKNAKGFTGTYRWMAPEMIKEKVHTKKVDVYSFGIVLWELLTALTPFDNLTPEQAAFAVCQKNARPPLPPSCPRALSWLINRCWSSNPDKRPHFDKITSLLESYAESLDQDPEFFTSYKPSICRKILQRIPKCIAG 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 746743 749070 + Conep19aG0014400.1 Cone19ag0138 458575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0138 353 PRINTS Tyrosine kinase catalytic domain signature 140 153 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0138 353 PRINTS Tyrosine kinase catalytic domain signature 245 267 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0138 353 PRINTS Tyrosine kinase catalytic domain signature 226 236 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0138 353 PRINTS Tyrosine kinase catalytic domain signature 289 311 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0138 353 PRINTS Tyrosine kinase catalytic domain signature 178 196 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0138 353 Gene3D Phosphorylase Kinase; domain 1 52 143 - -
Cone19ag0138 353 SMART serkin_6 62 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0138 353 PANTHER SERINE-THREONINE PROTEIN KINASE 60 319 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cone19ag0138 353 ProSiteProfiles Protein kinase domain profile. 62 322 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0138 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0138 353 SUPERFAMILY Protein kinase-like (PK-like) 52 318 IPR011009 -
Cone19ag0138 353 CDD STKc_MAP3K-like 69 318 - -
Cone19ag0138 353 Pfam Protein tyrosine and serine/threonine kinase 65 317 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0138 353 FunFam Serine/threonine-protein kinase isoform 1 52 144 - -
Cone19ag0138 353 Gene3D Transferase(Phosphotransferase) domain 1 145 342 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0138 Cone-Chr19:746743 Cone2ag0904 Cone-Chr2:34854307 2.36E-178 dispersed
Cone11ag0120 Cone-Chr11:540829 Cone19ag0138 Cone-Chr19:746743 1.76E-64 wgd
Cone13ag0137 Cone-Chr13:792263 Cone19ag0138 Cone-Chr19:746743 1.74E-247 wgd
Cone16ag0108 Cone-Chr16:632936 Cone19ag0138 Cone-Chr19:746743 3.34E-203 wgd
Cone18ag1359 Cone-Chr18:9340188 Cone19ag0138 Cone-Chr19:746743 4.24E-64 wgd
Cone19ag0138 Cone-Chr19:746743 Cone2ag0900 Cone-Chr2:34824127 1.85E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82366 PF04084 ORC2 3.80E-97 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0138 - - - 0.0