Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0174 ATGGCTTTCAAGGTCATGAAATCTCAATTGCATGAAACACTCGATCAGTTCAATCCCCTCCACCTTTCCCTCCTTCTCCTTTCCTTCTTTGCTTTATACATTAGGCTGATAAGAGGCAAAAACAAACTTAAGCTACCTCCCTCACCACCACAATTACCATTTATTGGAAATCTTCACCAATTAGGCAAACCCCCTCACCACTCTCTAAGAGCTCTTGCCAAAAAGCATGGGCCTGTCATGCTCATGAAATTGGGCCACATCCCAACTGTTGTCATTTCCTCAGCAGATATAGCTAGAGAAGTGATGAAGACACATGATACTGCTTTCTCAGACAGACCCCAACTTACTGCTCCAAAAGTCTTTTTCTATGGCTGCAAAGATGTGGCTTTCTGTTCATATGGAGAGTACTGGAGGCAGGCCAAGAAGATTAGTGCACTTGAACTTCTTAGTGCTAAAAGAGTACAATCATTTCATTATGTGAGGGAAGAAGAATGTCAAATTCTCTTAAAAAGGCTTAAATCTGCTTGTCTTAATGGATCTTCAGTTAATCTTACCGATTTGTTGCTTTTAGCGACGAACAACGTAGCCTTGAGATGTATGTTTGGGACCAAGTTTGACGACGGGAATGGAAAGAGCAAGTATGGAGAGCTAGCAAGACGGATTCAAGAGCTACTCTTGACGTTTTGCTTTACGGATTACTATCCTTCCTTGAGCTGGATTGATAATTTGAGGGGATTCAAAAGGCAATTGAAGGAAACTCATGATGAATTCGACGTGTTCCTCGGTCAGTTGATTAAAGAGCATAAGGCGAAACTTGGTTCTGATCAGTATGATAAGCAATCCAAGGTGAAGGACTTCATTGATATTCTTTTGGAAGTTCAAAGGGATGGCGAGTTTGAGATCACTGACAGCAACATCAAAGCAATCTTACTGGACATGCTTGTTGGAGGGAGTGACAGTTCTTCAACCTTAGTAGAATGGGCAATGGCAGAATTGATCAAAAACCCGAAAATAATGAAGAAGGCACAAGAAGAGATAAGAGGATTATTAGGAAAGAAAACAAAGATAAGTCTAGATGATGTACATAACATGCCTTATGTAGAAGGCATTATAAAAGAGTCTCTAAGGTTACACCCACCAGGTCCTCTTCTATCACCTAGACTGACAGTCACAGATGTAAGGATGGGAGGTTATGACATCCCTGCCAATACAAGAGTGATTGTAAATGCCTACGCAATCCACAGAGATCCGAAGTCGTGGGAAAATCCGGAGGAGTTCATCCCGGAGAGATTCTTGGAAACCCAGTTGGATTACAAAGGTCAAGACCATTACAAGTTGGTACCATTTGGCGGTGGAAGGAGAATGTGTCCTGGAATGTCATTTGCAACTACTGCTTCTAAGTATTTTGTGGTTAACTTCTTGCACTGGTTTGATTGGAAGCTTCCTGATGAAAGTGCAAGGTTCGAAGACTTTGACATAACTGAGTCTCCTGGACTCTCTGTCGCTAGGAAAATGCCTCTCATTCTCAAGCCAGTGCCATACTATCCTTGA 1551 41.97 MAFKVMKSQLHETLDQFNPLHLSLLLLSFFALYIRLIRGKNKLKLPPSPPQLPFIGNLHQLGKPPHHSLRALAKKHGPVMLMKLGHIPTVVISSADIAREVMKTHDTAFSDRPQLTAPKVFFYGCKDVAFCSYGEYWRQAKKISALELLSAKRVQSFHYVREEECQILLKRLKSACLNGSSVNLTDLLLLATNNVALRCMFGTKFDDGNGKSKYGELARRIQELLLTFCFTDYYPSLSWIDNLRGFKRQLKETHDEFDVFLGQLIKEHKAKLGSDQYDKQSKVKDFIDILLEVQRDGEFEITDSNIKAILLDMLVGGSDSSSTLVEWAMAELIKNPKIMKKAQEEIRGLLGKKTKISLDDVHNMPYVEGIIKESLRLHPPGPLLSPRLTVTDVRMGGYDIPANTRVIVNAYAIHRDPKSWENPEEFIPERFLETQLDYKGQDHYKLVPFGGGRRMCPGMSFATTASKYFVVNFLHWFDWKLPDESARFEDFDITESPGLSVARKMPLILKPVPYYP 516
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1011523 1048475 - Conep19aG0018000.1 Cone19ag0174 458611

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0174 516 FunFam Cytochrome P450 83B1 33 510 - -
Cone19ag0174 516 CDD CYP71-like 75 507 - -
Cone19ag0174 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone19ag0174 516 PRINTS E-class P450 group I signature 368 386 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS E-class P450 group I signature 305 322 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS E-class P450 group I signature 191 209 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS E-class P450 group I signature 325 351 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS E-class P450 group I signature 409 433 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS P450 superfamily signature 369 380 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 Gene3D Cytochrome P450 37 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 PANTHER CYTOCHROME P450 71B11-RELATED 29 511 IPR050193 -
Cone19ag0174 516 SUPERFAMILY Cytochrome P450 46 513 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0174 516 Pfam Cytochrome P450 46 485 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0174 K20617 - - csv:101206414 515.768
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0179 Cone-Chr13:1107086 Cone19ag0174 Cone-Chr19:1011523 2.11E-253 dispersed
Cone13ag0180 Cone-Chr13:1119411 Cone19ag0174 Cone-Chr19:1011523 8.15E-303 dispersed
Cone19ag0174 Cone-Chr19:1011523 Cone2ag0556 Cone-Chr2:3146952 2.55E-212 dispersed
Cone19ag0174 Cone-Chr19:1011523 Cone19ag0181 Cone-Chr19:1147937 4.63E-54 proximal
Cone19ag0173 Cone-Chr19:1004275 Cone19ag0174 Cone-Chr19:1011523 6.75E-207 tandem
Cone19ag0174 Cone-Chr19:1011523 Cone19ag0175 Cone-Chr19:1056775 1.76E-220 tandem
Cone16ag0957 Cone-Chr16:9623590 Cone19ag0174 Cone-Chr19:1011523 2.53E-18 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g856 . . . . . . . . . Cmo18g00169 . Cma11g00063 . . . . . Bhi02g00595 . . . . . . . . . . . . . . . . Cone19ag0174 Lsi02g00430 Csa01g00908 Chy12g01221 Cme12g01644 Blo13g00162 . . . . . . . . . Cmo11g00066 . . . . . . Bhi08g01677 . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000106 14 8 5 4 4 8 0 8 5 13 4 7 6 8 6 16 5 16 1 6 10 8 6 12 5 13 10 7 10 3 228