Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0175 ATGGAATTGCAAAGAGTAGTTTTCCAACAAGTAGCCTTTTTGTTTGAAACTATTCGTAACTTCAATCCCCTCTATTTTTTCATACTTGTCCTGTCCATCTTTGCTTTGTACGTTAAGCTGATTAGACGCAAAAACAAGACCAAGCTAAACTTACCTCCCTCACCACCTAAGTTACCTATAATTGGAAACCTTCACCAAATAAGTGCACTCCTCCATCACCCTCTTGCAGCTCTTGCCAAAAAGTATGGGCCCGATCTAATGCTCATGCAATTGGGTCAAACCCCATTTCTTATCGTCTCCTCTGCAGAGATGGCTAGGGAAATGATGAAGACTCATGATGCCGCTTTCTCGGACCGACCCCAAGTCACTGCGCCAAGAATCCATTTCTATGGTTGCAATGATGTAGCTTTTGCACCATATGGAGAGTATTGGAGGCAGACTAGGAAGGTTAGTGTTCTTGAACTTCTCAGTGTCAAAAGAGTGCAATCTTTTCAATTTGTGCGGGAAGAAGAGGTTCAAGTTCTTGTGCAAAGGCTTCACAAAGCAGCTCTTGATGGATTAACTGTAAATCTTACAGATTTGCTGCTTTTAACGTCGAATAATGTGGTCTCTAGATGTATTGTTGGAAAGAAATTCGACGAGGGAATTGGAAGAAGCAAGTATGCAGAGCTGTCGAGAGACATGTTAGAACAATTCTCAACTTTTTGCATCGGAGATTTCTTCCCTTCACTGAGCTGGATTGATGAATTGAGGGGAGTAGTAAGGCAGATTAAGAAAACGCATAAGGAATTCGACGAGTTCTTACGTCAAGTGATTATTGAACATAAGGTCAAACATGCTTCTCCTGAATATGATCCTAATTCTGACAAGGTAGACTTTGTGGATATTCTTCTCAAAGTTCAAAGGGACGGCACAACCGATTTCAAGCTCACCGATGACAACATCAAGGCAATCATAGTGGACATGCTTGTTGGAGGAAGTGATACTTCTTCGACCACGATTGAATGGACAATGGCAGAACTGATAAGAAATCCCAATGTAATGAAAAAGGCACAAGAAGAGGTAAGAAGAGTTTTGGGGATCAAGAAGACAAAGATAGAGCAAAGTGATTTAAGTGAAATGCGTTACTTAGATTGTGCGATAAAAGAAGCTTTAAGGCTACATCCGCCAGGTCCTCTTTTGGCACCGAGACAAACATCTGCAGCTATAAAAGATATGGGAGGTTATGATATCCCTGTCAAAACAAGAGTGCTTGTTAATGTCTATTCGATCCAAAGGGATCCAAAGTTATGGAAAAACCCGACCGAATTTATCCCGGAAAGGTTTATGGAAGGCAAAATCGAAATCAAAGGTGATCAAGAAAATTTTAGGTTTTTGCCATTTGGTGGTGGAAGACGAGGCTGTCCTGGATCAACATTTGCAGTTGCTTCAGCTAAGTATTTTTTGGCAAACTTTTTATATAGGTTTGATTGGATTCTTCCTGAGGATATTTCAAAGCCCGAAGATATGGATATGGGTGAATCTCCAGGAATTTCTGTCAATGATATAGCAGATGTCGACCAGTCGACTCATAGACCTGTCGACCCTATCAACCTTGTCGACCCATTAAGTACGTCAAGCCATCGAGTACTTTACATATTGGAGGCGTCGAGTACATCGATCTGTCGACTCGTCAAGTAG 1680 41.37 MELQRVVFQQVAFLFETIRNFNPLYFFILVLSIFALYVKLIRRKNKTKLNLPPSPPKLPIIGNLHQISALLHHPLAALAKKYGPDLMLMQLGQTPFLIVSSAEMAREMMKTHDAAFSDRPQVTAPRIHFYGCNDVAFAPYGEYWRQTRKVSVLELLSVKRVQSFQFVREEEVQVLVQRLHKAALDGLTVNLTDLLLLTSNNVVSRCIVGKKFDEGIGRSKYAELSRDMLEQFSTFCIGDFFPSLSWIDELRGVVRQIKKTHKEFDEFLRQVIIEHKVKHASPEYDPNSDKVDFVDILLKVQRDGTTDFKLTDDNIKAIIVDMLVGGSDTSSTTIEWTMAELIRNPNVMKKAQEEVRRVLGIKKTKIEQSDLSEMRYLDCAIKEALRLHPPGPLLAPRQTSAAIKDMGGYDIPVKTRVLVNVYSIQRDPKLWKNPTEFIPERFMEGKIEIKGDQENFRFLPFGGGRRGCPGSTFAVASAKYFLANFLYRFDWILPEDISKPEDMDMGESPGISVNDIADVDQSTHRPVDPINLVDPLSTSSHRVLYILEASSTSICRLVK 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1056775 1062262 - Conep19aG0018100.1 Cone19ag0175 458612

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0175 559 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone19ag0175 559 FunFam Cytochrome P450 83B1 39 519 - -
Cone19ag0175 559 SUPERFAMILY Cytochrome P450 52 504 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 Gene3D Cytochrome P450 36 523 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS E-class P450 group I signature 378 396 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS E-class P450 group I signature 334 360 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS E-class P450 group I signature 104 125 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS E-class P450 group I signature 80 99 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS E-class P450 group I signature 314 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS E-class P450 group I signature 198 216 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 Pfam Cytochrome P450 52 501 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 CDD CYP71-like 81 513 - -
Cone19ag0175 559 PANTHER CYTOCHROME P450 71B11-RELATED 29 514 IPR050193 -
Cone19ag0175 559 PRINTS P450 superfamily signature 325 342 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0175 559 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0175 K20617 - - mdm:103455066 479.944
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0175 Cone-Chr19:1056775 Cone2ag0556 Cone-Chr2:3146952 4.72E-209 dispersed
Cone19ag0174 Cone-Chr19:1011523 Cone19ag0175 Cone-Chr19:1056775 1.76E-220 tandem
Cone19ag0175 Cone-Chr19:1056775 Cone19ag0176 Cone-Chr19:1083492 8.93E-197 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1071 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone19ag0175 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000106 14 8 5 4 4 8 0 8 5 13 4 7 6 8 6 16 5 16 1 6 10 8 6 12 5 13 10 7 10 3 228