Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone19ag0177 | ATGTCAGCTAACTTGCTGCCAATTTCACAGAAAATTCTAACCTCCTTTTTATCATATCCCTATGCCTTCACCATCTCAACCACAATCTTCCTCCTCCTCCTACATCGTGTCCTCCTCCTCAAAAGGCGGCAGCAACCTCCTTCCTCTGGTGCAAAAAACCATCCACCGACTCTCCCAAAACTACCCATCTTCGGAAACCTCTTCGACTTGGGCTCCCACCCACACACAACCCTCAAAAACTTAGCCCAAATCCATGGCCCAATCATGCTCCTACACTTCGGCAATGTACCAGTCCTTGTTGTCTCCTCCCCCGATTCCGCATCCGAAATCATGAAAACCCAGGACATCATATTTGCAAATCGCCCCTGTTTAAACATCTGGAAGAAACTACTCTATGACCACAAAGACATAGCTGGCGCACCTTATGGGGAATATTGGAGACAAATGAAGAGTGTTTGTATTCTTCATCTCCTAAGCAACAAAATGGTTAAGTCGTTTCGGGCGATTAGAGAAGAGGAAACAAACTTAATGGTTCAGAAGATCATTAACAAATCTTCTTCTCCTTCTAAAGAAGAAGTCGTAATCAATTTGAGTGAAGTTTTTGCTAAGTTGACAAATGATGTGATTTGCAGGGTAGCGTTAGGGAAGAAGTATGGAGGTGAAGAAGAAGGGAAGACATTTAAGAGGTTATTATCGGAGTATATGGAATTGCTGGGTATTTTTGATATAGGGGATTATATTCCATGGCTTGGTTGGGTGAATTATGTGAGTGGCTTGAACGCTAGGGCGGACAGGGTTGCTAAAGAGTTTGATGGGTATTTAGATAAAGTTGTGAAAGAACATGCTGATAGGAAAAAGGAAGATCATGATGATGATGGTCATAAGGATTTTGTGGACGTTTTGCTTGAAGTTCAGAAAGAGAGGTCAACTGGGTTTTCTCTTGACAGTGTTAGTATCAAGGCTCAGATTTTTGATATGTTTGCTGCAGGTACTGATACTACATCAACTTTAATTGAATGGGCAATGACAGAACTATTAAGAAACCCCATGGTCATGAAAAAACTACAAAACGAAGTGAAGCAAGTGACTGGCTCCAAAGCAGAAGTCACAGAAGATAAACTAAACCAAATGCCTTACTTAAAAGCTGTAATTAAAGAAACTCTACGCTTACATCCTCCGCTTCCGCTTCTTATCCCTAGAAAATCAACCCGAAACATCACCGTAAAAGGTTATGAAGTTCACGCTGGAACATTGGTGTTCATCAATGCTTCTGCAATTGGAAGAGATTCATCCATATGGGACAAGCCGAATGAGTTTAACCCGGAAAGGTTTCTCAACAGCTCGATAGATTTCAAAGGCCATGATTTTGAATTGATCCCATTTGGAGCTGGGAGGAGAGCTTGCCCTGGAGTTTTATTTGCTAGTCTTATTAACGAGCTTGCTTTGGCTAATCTTGTCAGTCATTTTGATTGGGGTTTGCCTGGTGGAGCAAGGGGTGAAGATATGGACATGAATGAGTCCGTGGGGTTGACTATAAAGAAGAAAGTTCCTCTCCTCGCTGTTGGTACTCCTTGTCCTTCAATGTAG | 1587 | 42.16 | MSANLLPISQKILTSFLSYPYAFTISTTIFLLLLHRVLLLKRRQQPPSSGAKNHPPTLPKLPIFGNLFDLGSHPHTTLKNLAQIHGPIMLLHFGNVPVLVVSSPDSASEIMKTQDIIFANRPCLNIWKKLLYDHKDIAGAPYGEYWRQMKSVCILHLLSNKMVKSFRAIREEETNLMVQKIINKSSSPSKEEVVINLSEVFAKLTNDVICRVALGKKYGGEEEGKTFKRLLSEYMELLGIFDIGDYIPWLGWVNYVSGLNARADRVAKEFDGYLDKVVKEHADRKKEDHDDDGHKDFVDVLLEVQKERSTGFSLDSVSIKAQIFDMFAAGTDTTSTLIEWAMTELLRNPMVMKKLQNEVKQVTGSKAEVTEDKLNQMPYLKAVIKETLRLHPPLPLLIPRKSTRNITVKGYEVHAGTLVFINASAIGRDSSIWDKPNEFNPERFLNSSIDFKGHDFELIPFGAGRRACPGVLFASLINELALANLVSHFDWGLPGGARGEDMDMNESVGLTIKKKVPLLAVGTPCPSM | 528 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 1127062 | 1128800 | + | Conep19aG0018300.1 | Cone19ag0177 | 458614 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone19ag0177 | 528 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 461 | 470 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone19ag0177 | 528 | Pfam | Cytochrome P450 | 55 | 514 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | Coils | Coil | 352 | 372 | - | - | |
| Cone19ag0177 | 528 | CDD | CYP71-like | 85 | 518 | - | - | |
| Cone19ag0177 | 528 | FunFam | Cytochrome P450 83B1 | 41 | 521 | - | - | |
| Cone19ag0177 | 528 | PRINTS | P450 superfamily signature | 459 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | P450 superfamily signature | 329 | 346 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | P450 superfamily signature | 382 | 393 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | SUPERFAMILY | Cytochrome P450 | 55 | 521 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | E-class P450 group I signature | 381 | 399 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | E-class P450 group I signature | 106 | 127 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | E-class P450 group I signature | 204 | 222 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | E-class P450 group I signature | 458 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | E-class P450 group I signature | 318 | 335 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | E-class P450 group I signature | 468 | 491 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | E-class P450 group I signature | 338 | 364 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | E-class P450 group I signature | 82 | 101 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PRINTS | E-class P450 group I signature | 422 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | Gene3D | Cytochrome P450 | 39 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0177 | 528 | PANTHER | CYTOCHROME P450 71B11-RELATED | 37 | 521 | IPR050193 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone13ag0183 | Cone-Chr13:1136459 | Cone19ag0177 | Cone-Chr19:1127062 | 1.17e-316 | dispersed | |
| Cone16ag0062 | Cone-Chr16:324590 | Cone19ag0177 | Cone-Chr19:1127062 | 1.69E-144 | dispersed | |
| Cone19ag0177 | Cone-Chr19:1127062 | Cone2ag0556 | Cone-Chr2:3146952 | 2.60E-132 | dispersed | |
| Cone19ag0176 | Cone-Chr19:1083492 | Cone19ag0177 | Cone-Chr19:1127062 | 7.19E-108 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone19ag0177 | - | - | - | 0.0 |