Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0181 ATGTTGAGTACGTTATTATCGTTGAGGGATGAACCGTGTGATGAGGGAAGCAAGCTTACTGATGTCGAAATCAAAGCATTGTTACTGAACATGTTCGTCGGCGGCACTGACACGTCTTCAAGCACAACAGAATGGGCCATGGCAGAATTAATCCGACACCCAAAAATCTTGGCCCAAGTCCAAGAGGAGCTGGATATGGTCGTGGGCCGTGATCGTCTCGTAAATGAACTGGACCTACCCCGACTGACCTATCTTCAAGCCGTTGTGAAGGAAACGTTCAGGATTCACCCGGCAGCCCCACTCAACCTCCCTCGAATAGCGGCCGAGAGTTGCCAAGTGGACGGCTATCACATCCCAAAGGGGTCAACTCTTCTTGTCAACACCTGGGCCATTGGACGTGACCCAAATGAATGGGTTAACCCACTTGAGTTCAGGCCAGAAAGATTCTTACCAGGAGGTGAGAAGGCCCATGTTAATGTGTTCGGGAATCATTTTGAGCTCATGCCATTTGGATCAGGGAGTAGGATTTGTGTTGGAATGAATTTGGGCTATCGAATGGTCCAGTTACTAACTGCTACCTTTATGCATGCATTCAACTGGGAGCTACCAAATGGGCTTAGGCACGAGAACCTGAACATGGAGGAGACCTTTGGAATTGCATTGGAACGGGCAGAGGCTTTAACGTTGCACCCACGGCCCAGATTGTCGCCAGATGTTTACTAA 723 49.24 MLSTLLSLRDEPCDEGSKLTDVEIKALLLNMFVGGTDTSSSTTEWAMAELIRHPKILAQVQEELDMVVGRDRLVNELDLPRLTYLQAVVKETFRIHPAAPLNLPRIAAESCQVDGYHIPKGSTLLVNTWAIGRDPNEWVNPLEFRPERFLPGGEKAHVNVFGNHFELMPFGSGSRICVGMNLGYRMVQLLTATFMHAFNWELPNGLRHENLNMEETFGIALERAEALTLHPRPRLSPDVY 240
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1147937 1148918 - Conep19aG0018700.1 Cone19ag0181 458618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0181 240 FunFam Putative cytochrome P450 superfamily protein 25 232 - -
Cone19ag0181 240 PRINTS E-class P450 group I signature 23 40 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 PRINTS E-class P450 group I signature 86 104 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 PRINTS E-class P450 group I signature 167 177 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 PRINTS E-class P450 group I signature 177 200 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 PRINTS E-class P450 group I signature 127 151 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 PRINTS E-class P450 group I signature 43 69 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 170 179 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone19ag0181 240 PRINTS P450 superfamily signature 177 188 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 PRINTS P450 superfamily signature 87 98 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 PRINTS P450 superfamily signature 168 177 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 PRINTS P450 superfamily signature 34 51 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 Gene3D Cytochrome P450 1 228 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 PANTHER CYTOCHROME P450 98A9 3 240 - -
Cone19ag0181 240 SUPERFAMILY Cytochrome P450 2 234 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone19ag0181 240 Pfam Cytochrome P450 5 215 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0040 Cone-Chr13:235810 Cone19ag0181 Cone-Chr19:1147937 5.28E-145 dispersed
Cone19ag0181 Cone-Chr19:1147937 Cone12ag0360 Cone-Chr12:2026261 3.05E-70 dispersed
Cone19ag0174 Cone-Chr19:1011523 Cone19ag0181 Cone-Chr19:1147937 4.63E-54 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0181 K05280 - rcu:8284440 353.984