Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0183 ATGGGGCTCTCCTCCCTCGGCAAATCACTTCACCTCCCTCTCCTCACCTTCCTCTGTCTCCTCCTTCTCATCAATGCCAGATCAACTCTCCACTCTTCAGATCACAAAGCCTTATCTACCATCACGAGAGATTTGGGAATCAACGGTCAACGCCCCACTTTCAGCTCACAATGTCCATGTATGGCAACCGGTGTTTTCTGTGAGAGGAGGCTGCTTTTCAGCAACAACAATACCTATGTGCTAAGGATCACTAGGCTCGTGTTTAAATCACAGAACCTTACCGGATTTCTTTCCGCGGAAATCGGACGGCTCTCTGAGCTCAAGGAGCTCTCTGTTTCCAACAATTTTCTCGTTGACCAAATACCACCCAAAATCGTTGACTGCAGAAAACTTGAAATCCTTGACCTCAAAAGCAACAGATTTTTTGGTCAAATTCCATCTGAATTGTCCTCACTCAGACTCCTGAAAGCGCTTGATATTTCCTCAAATCAGTTTTCTGGAGATTTGAGTTTCTTGAAGTATTTTCCCAACCTGGAAAATCTTTCAATCTCAGACAATCAATTTTCTGGGAAAATCCCGGCTTCGATCCGATCGTTTCGGAATCTCAGAGTGTTCGACTTTTCTGGGAATCCTTTTCTAGAAAGTTCATTTCCCATGATGAAAGGGGTAGAGTACTCAGCACGTAATAATCTTCCTAAGCGTTATATATTAGCTGAGACAAATTCAACTACTACGAAGAACAAGAATAGTTCTTCTAATTCAGTTATGGCACCAAGTGTCCAAGCTCCATCTCCAACGCCAGAACCAAAAAAGCACAAGAGCAGCAAAAGAAAGTTTTTTGCTTGGCTGCTTGGGTTTCTAGCTGGAGCAATAGGCGGAATAGTATCCGGGTTTATCTTTTCTTTCCTGCTCAAGCTTGTTATAGCCGCCATAAAAGGAGGAGGAAGAGATAAAGGTCCATCTATCTTCAGTCCTCTGATTAAAAAAGCAGAGGACTTATCTTTCCTAGAGAAAGATGATGGACTTGCAACATTAGAGCTAATCGGAAAAGGCGGCTGTGGAGAAGTTTACAAAGCCGAATTACCTGGAAGCAACGGAAAGATGATTGCTATAAAGAAAATAATCCAACCTCCAAAAGATGCATCAGAATTAGCAGAAGAAGAGACCAAAGATATGCATAAAAAAATGCGTCAGATCAAGTCGGAAATCAACACAGTGGGACAAATCCGTCACCGGAATCTCCTCCCTCTCCTGGCTCACGTTCCTCGGCCTGATTGCCATTATCTGGTCTATGAATTCATGAAAAACGGTAGTTTACACGATAGGTTATTCAAGGATTCGGAAGGGAATGCAGAACTAGACTGGTTTACCAGGCATAGAATTGCACATGGAGTAGCATCTGGGCTTGAGTATCTTCACATGAATCATAGCCCAAGAATAATCCATAGAGATCTTAAGCCAGCTAATATTCTACTGGATGATGACATGGAGGCCAGGATTGCAGATTTTGGTTTAGCTAAAGCAATGCCAGATGCACATACTCATATCACGAGTTCCAATGTTGCGGGAACTGTTGGGTTTATTGCTCCAGAGTATTACCAGACATTGAAATTCACTGACAAGTGCGATATCTTCAGTTTTGGTGTTCTGCTTGCTGTGCTTGTAATGGGGAAACTTCCTTCTGACGGGTTTTTCCAGCATACAGAGGAGATGAGCTTGGTGAAGTGGTTGAGGAATGTGATGAGTTCGGAGGATCCTCAAATAGCAGTCGACCCAAAACTGATGGGGAACGGGTGGGAAGAGCAGATGCTATTGGTGTTGAAGATTGCTTGTTTCTGTACTTTGGATAACCCAAAAGAAAGACCTAATAGTAAGGATGTTAGGTGTATGTTGTCTCAGATTAAGCACTAA 1911 42.96 MGLSSLGKSLHLPLLTFLCLLLLINARSTLHSSDHKALSTITRDLGINGQRPTFSSQCPCMATGVFCERRLLFSNNNTYVLRITRLVFKSQNLTGFLSAEIGRLSELKELSVSNNFLVDQIPPKIVDCRKLEILDLKSNRFFGQIPSELSSLRLLKALDISSNQFSGDLSFLKYFPNLENLSISDNQFSGKIPASIRSFRNLRVFDFSGNPFLESSFPMMKGVEYSARNNLPKRYILAETNSTTTKNKNSSSNSVMAPSVQAPSPTPEPKKHKSSKRKFFAWLLGFLAGAIGGIVSGFIFSFLLKLVIAAIKGGGRDKGPSIFSPLIKKAEDLSFLEKDDGLATLELIGKGGCGEVYKAELPGSNGKMIAIKKIIQPPKDASELAEEETKDMHKKMRQIKSEINTVGQIRHRNLLPLLAHVPRPDCHYLVYEFMKNGSLHDRLFKDSEGNAELDWFTRHRIAHGVASGLEYLHMNHSPRIIHRDLKPANILLDDDMEARIADFGLAKAMPDAHTHITSSNVAGTVGFIAPEYYQTLKFTDKCDIFSFGVLLAVLVMGKLPSDGFFQHTEEMSLVKWLRNVMSSEDPQIAVDPKLMGNGWEEQMLLVLKIACFCTLDNPKERPNSKDVRCMLSQIKH 636
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1158498 1160604 + Conep19aG0018900.1 Cone19ag0183 458620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0183 636 SUPERFAMILY L domain-like 54 215 - -
Cone19ag0183 636 MobiDBLite consensus disorder prediction 242 272 - -
Cone19ag0183 636 FunFam Leucine-rich repeat receptor-like protein kinase 434 636 - -
Cone19ag0183 636 Gene3D Ribonuclease Inhibitor 171 242 IPR032675 -
Cone19ag0183 636 SUPERFAMILY Protein kinase-like (PK-like) 337 631 IPR011009 -
Cone19ag0183 636 Gene3D Ribonuclease Inhibitor 22 170 IPR032675 -
Cone19ag0183 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 230 635 IPR051564 GO:0016020(PANTHER)
Cone19ag0183 636 Gene3D Phosphorylase Kinase; domain 1 333 433 - -
Cone19ag0183 636 Pfam Protein kinase domain 344 625 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0183 636 Pfam Leucine Rich Repeat 130 152 IPR001611 GO:0005515(InterPro)
Cone19ag0183 636 Pfam Leucine Rich Repeat 177 198 IPR001611 GO:0005515(InterPro)
Cone19ag0183 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0183 636 FunFam leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 329 433 - -
Cone19ag0183 636 MobiDBLite consensus disorder prediction 242 261 - -
Cone19ag0183 636 FunFam Leucine-rich repeat receptor protein kinase EMS1 75 172 - -
Cone19ag0183 636 SMART serkin_6 342 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0183 636 ProSiteProfiles Protein kinase domain profile. 342 636 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0183 636 Gene3D Transferase(Phosphotransferase) domain 1 434 636 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0652 Cone-Chr14:3277702 Cone19ag0183 Cone-Chr19:1158498 9.06E-51 dispersed
Cone15ag0664 Cone-Chr15:3482693 Cone19ag0183 Cone-Chr19:1158498 5.70E-50 dispersed
Cone19ag0183 Cone-Chr19:1158498 Cone15ag1304 Cone-Chr15:10182636 1.52E-56 dispersed
Cone13ag0190 Cone-Chr13:1182897 Cone19ag0183 Cone-Chr19:1158498 6.09e-319 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82368 PF07714 PK_Tyr_Ser-Thr 1.50E-63 CL0016 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0183 - - - 0.0