Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0199 ATGGAGGGTAAGAATCAGACAGACTGCTGGTCAACAGAGAAACGTCGGACGATCAAAAGTCCCAAAGCATTCAATCTTTTCATATTGAAAAGAACGCCCAAGTGCTCTAGAGAGAGAAAGGGAGACGGCAATGGCGGCGAGCACTTCTTCTGCTGCAGCGAACTTGGAAGATGTGCCCTCCGTCGATCTCATGTCCGCTCTTCCAAATCAGACAAACGCCTAATTCTCATTGGCCCGCCTGGGTCAGGAAAGGGTACACAATCTCCCGTGATCAAGGATGAATACTGCTTATGCCACTTGGCAACTGGTGATATGTTAAGAGCTGCCGTTGCTGCCAAAACTCCTCTTGGCATTAAGGCTAAAGAGGCTATGGACAAGGGTGATCTTGTGTCTGATGACTTGGTTGTTGGCATCATAGATGAAGCAATTAAGAAGCCCTCATACCAGAAAGGCTTCATTCTCGATGGGTTTCCGAGGACTGAGGTTCAAGCTCAGAAGTTATATGCAGCTAGATGA 516 47.67 MEGKNQTDCWSTEKRRTIKSPKAFNLFILKRTPKCSRERKGDGNGGEHFFCCSELGRCALRRSHVRSSKSDKRLILIGPPGSGKGTQSPVIKDEYCLCHLATGDMLRAAVAAKTPLGIKAKEAMDKGDLVSDDLVVGIIDEAIKKPSYQKGFILDGFPRTEVQAQKLYAAR 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1247532 1250001 - Conep19aG0020500.1 Cone19ag0199 458636

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0199 171 Hamap Adenylate kinase [adk]. 72 171 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone19ag0199 171 CDD ADK 73 167 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone19ag0199 171 ProSitePatterns Adenylate kinase signature. 152 163 IPR033690 -
Cone19ag0199 171 Gene3D - 58 170 IPR027417 -
Cone19ag0199 171 PANTHER NUCLEOTIDE KINASE 69 167 IPR000850 GO:0004017(PANTHER)|GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0005739(PANTHER)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone19ag0199 171 Pfam Adenylate kinase 76 167 - -
Cone19ag0199 171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 167 IPR027417 -
Cone19ag0199 171 PRINTS Adenylate kinase signature 152 168 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone19ag0199 171 PRINTS Adenylate kinase signature 75 88 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
Cone19ag0199 171 PRINTS Adenylate kinase signature 103 117 IPR000850 GO:0005524(InterPro)|GO:0006139(InterPro)|GO:0019205(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0199 K00939 - - vvi:100245612 192.2
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0060 Cone-Chr11:263011 Cone19ag0199 Cone-Chr19:1247532 1.26E-07 wgd
Cone16ag0028 Cone-Chr16:180341 Cone19ag0199 Cone-Chr19:1247532 8.12E-62 wgd
Cone18ag1420 Cone-Chr18:9621519 Cone19ag0199 Cone-Chr19:1247532 9.00E-08 wgd
Cone19ag0199 Cone-Chr19:1247532 Cone2ag0964 Cone-Chr2:35200753 1.43E-62 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g143 . . Bda06g00737 . . . . Bma12g01075 . Cmo18g00202 . . Car10g00061 . . . . Bhi02g00537 . . . Hepe09g0061 . . . . . . . . . Cone2ag0964 Cone16ag0028 . Cone19ag0199 Lsi02g00488 Csa01g00950 Chy12g01181 Cme12g01602 . Blo15g00217 Bda11g01817 . Bpe07g00882 . . . . . . . . . Car18g00219 Cpe09g00971 . Bhi08g01461 . . . . . . Cla03g00344 Cam03g0360 . Cco03g0365 Clacu03g0361 Cmu03g0966 Cre03g0659 . Csa01g00069 Chy02g02651 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0054812 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 1