Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0206 ATGACGACTGCGACCACCAATATAGGCGGACGTGGCGAGGATCGAGTTCTGGCGACAGCTCAGCAGATCGTCAAGAGCCTCAATACTCCCAAAGAGGTCCGCGAGGATATGCTCTTGATCTTCTCCAGCTTCGACAATCGTCTATCCAACATATCTAATTTGATTAACGGCGAGGATTCGAAGACAAGAGGGGAGGGGATAGAGGAGGGGGAGGAGGAGGAGGATTGCCGGTTTGATGCAGCTGAGAAGGTGATTCTTCGTCGGGGATCCGACAATGTTTCTAGAGCTTCTCTTCCTTGGGAAGACTCGTTGGACGAGTTGGCTGAGTACTTGTCATCTGTCGATGAGATCATCAATTCGATGCAGGATCTTTCTGTTCGTGCGGATTCCGCTGATCTCATGGATAGGGCGGAGAACGTGATCCAGGTCGCCATGTCCAGGCTAGAGGAAGAATTCCGCCATATACTGATCCGAAGCACAGTTCCTCTTGACGCTGACCGCTTATACGGTTCGATCCGTAGAGTTTCTCTCTCCTTCGCTTGCAACGATGGTGAAATTGACGATGAATTCGAGAGCTTTGGAGAGATGGATCGTGGCTCCGAGCGATTCCATGAGCGAGGGGGTAGTCTGGGAGATGACGTGTTCGTCGATTTGATTCATCCTGAAGCGGTGGTTGAGCTGAAGGAGATAGCGGATCGTATGATTCGATCTGGATATGAAAAGGAGGGTGTTCAGGTTTATAGTGGTGTTCGTCGTGATGCATTGGATGAGTGTTTGGCGATTCTTGGAGTTGAGAGGCTTAGCATTGAAGAGGTTCAGAAAATTGACTGGAAGATTCTAGACGAGAAGATGAAGAAATGGGTTCAAGCTGTTAAAATTTCTGTTCGAGTGCTTTTGACTGGAGAGAAGAGACTATGTGATCAAATCTTTAATGGATCTGAGGATTGTAAGGAGGTTTGTTTCAATGAGACTGCAAAAGGATGTTTGATGCAGCTGCTGAATTTTGGTGAGGCAGTGGCTATTGGAAAAAGGTCACCTGAGAAATTATTCAGGATTTTGGACATGTATGATGCTTTAGCTGATGCTTTTCCGGACTTGGAAGCCATGGTTACGGATGAGCTTGTGGTTGGAGAGGCACAAGGAGTGCTGTCTGGACTGAGAGAAGCTGCTAGAGGGACATTTGCAGAGTTTGAGAATGCTGTTAAGAGTGAGACTTCTCGGAAAGCTTTGCTAAACGCCGAGATTCACCCGCTTACAAGGTACGTGATGAACTATGTGAAGTTGCTTGTGGAGTATAAAAACACGCTGAACTCTCTTTTAGAAGATGGGAAAGAGGAACTGGGTGCTTTGCAGAATGATAAAGGCGATAATTTGCAGTTAGAAAACATGTCTCCTATAGCTTGTAGACTTTTTTTGCTGCTATCATGTTTGGAGTCGAACCTTGAGGCAAAATCAAGGCTCTATGATGATGGGGCAATGAAATATATCTTTCTTATGAACAATATACTTTACATAGTGCAAAAAGTGAAAGATTCTGAGCTTGGAAAGCTTTTGGGCGATAATTGGGTACGTAAGCGCCGCGGCCAAATTCGCCAATATGCAACAAGCTATCTTAGAGCTTCGTGGATAAAGGTGTTGTCTTACTTAAAGGATGAGGGGATTGGTGGGAGCACTGGTAATGCCTCTAAGGTTGTTTTAAAAGAAAAGTTTAAGAATTTCAATGCCGGGTTTGAGGAAATATATAGGGTTCAAACAGCTTGGAAAGTGCCTGACAATCAACTGAGGGAAGAGCTTAGGATATCTATATCGGAAAAGGTGATTCCTGCTTATCGTGCTTTCATGGGAAGATTTGGAAGTCAGCTAGAGGGTGGAAGAAATTCTGGGAAATACATAAAATACTCAGCTGATGATTTAGAACACTATTTATTGGATTTGTTTGAAGGATCACCTGGCATTCTGCACCACCTTCGACGAAAAAGTACATAG 1986 44.86 MTTATTNIGGRGEDRVLATAQQIVKSLNTPKEVREDMLLIFSSFDNRLSNISNLINGEDSKTRGEGIEEGEEEEDCRFDAAEKVILRRGSDNVSRASLPWEDSLDELAEYLSSVDEIINSMQDLSVRADSADLMDRAENVIQVAMSRLEEEFRHILIRSTVPLDADRLYGSIRRVSLSFACNDGEIDDEFESFGEMDRGSERFHERGGSLGDDVFVDLIHPEAVVELKEIADRMIRSGYEKEGVQVYSGVRRDALDECLAILGVERLSIEEVQKIDWKILDEKMKKWVQAVKISVRVLLTGEKRLCDQIFNGSEDCKEVCFNETAKGCLMQLLNFGEAVAIGKRSPEKLFRILDMYDALADAFPDLEAMVTDELVVGEAQGVLSGLREAARGTFAEFENAVKSETSRKALLNAEIHPLTRYVMNYVKLLVEYKNTLNSLLEDGKEELGALQNDKGDNLQLENMSPIACRLFLLLSCLESNLEAKSRLYDDGAMKYIFLMNNILYIVQKVKDSELGKLLGDNWVRKRRGQIRQYATSYLRASWIKVLSYLKDEGIGGSTGNASKVVLKEKFKNFNAGFEEIYRVQTAWKVPDNQLREELRISISEKVIPAYRAFMGRFGSQLEGGRNSGKYIKYSADDLEHYLLDLFEGSPGILHHLRRKST 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1303296 1305468 - Conep19aG0021200.1 Cone19ag0206 458643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0206 661 FunFam Exocyst subunit Exo70 family protein 93 654 - -
Cone19ag0206 661 Coils Coil 433 453 - -
Cone19ag0206 661 Pfam Exocyst complex component Exo70 N-terminal 94 157 - -
Cone19ag0206 661 SUPERFAMILY Cullin repeat-like 101 647 IPR016159 -
Cone19ag0206 661 PANTHER EXOCYST COMPLEX PROTEIN EXO70 22 649 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone19ag0206 661 Gene3D Exocyst complex component Exo70 97 652 - -
Cone19ag0206 661 Pfam Exo70 exocyst complex subunit C-terminal 285 644 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0057 Cone-Chr17:321235 Cone19ag0206 Cone-Chr19:1303296 2.08E-135 dispersed
Cone18ag1136 Cone-Chr18:8194123 Cone19ag0206 Cone-Chr19:1303296 1.13E-133 dispersed
Cone19ag0206 Cone-Chr19:1303296 Cone20ag1348 Cone-Chr20:8666061 4.68E-141 dispersed
Cone13ag0215 Cone-Chr13:1391865 Cone19ag0206 Cone-Chr19:1303296 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0206 K07195 - mdm:103454965 964.911