Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0236 ATGTCTAGTCTCTCTGAAAATGTTGGTGAATCGCTCATCCCAAGCTGTCTATATTCGGTTACGACGTTGTCGTCTAAGAGATCATTACATGGATTGCCACCTTCTTGCTCTCCGTCTCCATCATCTTCATCGCTGATTGGAATCGGCGCTGGGACATCGAGGAGCTTTGTGATTCCGGCTCCGAAGGAGAAGATCGAGATGTACTCACCCAGCTTTTATGCAGCGAGCACGGTTGGGGGCATGTTAAGTACTGGACCCACACACATGGCTGTTACTCCTATCGACCTTGTCAAGTGTAATATGCAGATTGACCCCACCAAGTACAAGAACGTATCATCCGGATTTGGAGTATTGTTGAAGGAGCAGGGGATTAGAGGGTTCTTCAGGGGTTGGGCACCAACTTTGCTTGGTTACAGCGTTCAAGGTGCAGGCAAGTATGGATTCTATGAGTTCTTTAAGAAGTATTATTCAGATATTGCTGGGCCTGAGTATGCAACCAAGTATAAGACCTTGATCTATCTGGCTGGTTCTGCTTCTGCTGAAGTCATTGCCGCTGTTGGTCTTTGCCCCATGGAAGCCGTCAAGGTCCGTGTCCAGACCCAACCCGGGTTCGCTCGTGGTCTGTCTGATGGTCTTCCTAAGTTTGTCAAGTCCGAAGGTGTTCTCGGGCTGTACAAAGGACTTGTTCCTCTTTGGGGACGTCAGGTTCCTTACACGATGATGAAGTTTACATCATTTGAGACAATAGTGGAGCTGATATACAAGCATGGGATTCCAAAACCTAAAGAAGAATGCAGCAAGCCACTGCAGCTAGGAGTGAGCTTTGCTGGCGGGTATGTGGCCGGTATCTTCTGTGCTATCATCTCACACCCGGCTGATAACCTTGTCTCTTTCCTCAACAATGCCAAGGGAGCTACCGCTGGTTATGCCGTTAAGCAATTAGGGTTGTGGGGGCTATTCACACGTGGTCTACCTCTTCGTATCATCATGATCGGAACCCTAAGTGGGGCTCAATGGGTTAGCTACGATGGCTTCAAGGTCTTCGTTGGCCTGCCAACTACAGGAGGTGCCAGTCATGCTCCTGCCGCTAAAGAGCTTGCAGAAGCATAA 1110 49.01 MSSLSENVGESLIPSCLYSVTTLSSKRSLHGLPPSCSPSPSSSSLIGIGAGTSRSFVIPAPKEKIEMYSPSFYAASTVGGMLSTGPTHMAVTPIDLVKCNMQIDPTKYKNVSSGFGVLLKEQGIRGFFRGWAPTLLGYSVQGAGKYGFYEFFKKYYSDIAGPEYATKYKTLIYLAGSASAEVIAAVGLCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGVLGLYKGLVPLWGRQVPYTMMKFTSFETIVELIYKHGIPKPKEECSKPLQLGVSFAGGYVAGIFCAIISHPADNLVSFLNNAKGATAGYAVKQLGLWGLFTRGLPLRIIMIGTLSGAQWVSYDGFKVFVGLPTTGGASHAPAAKELAEA 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1548657 1550672 - Conep19aG0024300.1 Cone19ag0236 458673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0236 369 FunFam Phosphate carrier protein, mitochondrial 71 349 - -
Cone19ag0236 369 Pfam Mitochondrial carrier protein 72 158 IPR018108 -
Cone19ag0236 369 Pfam Mitochondrial carrier protein 169 256 IPR018108 -
Cone19ag0236 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 71 155 IPR018108 -
Cone19ag0236 369 ProSiteProfiles Solute carrier (Solcar) repeat profile. 168 252 IPR018108 -
Cone19ag0236 369 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 60 357 IPR044677 GO:0005315(PANTHER)|GO:0005315(InterPro)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Cone19ag0236 369 SUPERFAMILY Mitochondrial carrier 74 343 IPR023395 -
Cone19ag0236 369 Gene3D Mitochondrial carrier domain 72 349 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0021 Cone-Chr11:128661 Cone19ag0236 Cone-Chr19:1548657 9.07E-193 dispersed
Cone19ag0236 Cone-Chr19:1548657 Cone19ag1356 Cone-Chr19:9005778 2.83E-10 dispersed
Cone18ag1459 Cone-Chr18:9772843 Cone19ag0236 Cone-Chr19:1548657 8.72E-193 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0236 K15102 - zma:103627788 548.895