Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0262 ATGACTTGGAGAAGAGTATTAAAGGCCGTTCAGACACTCGGGGCCCACACTTCTCTCTTCTGCTTTACCCTCTTGCTCGTTCTCAAGCTCGATCATGTCGTCTCTTCCAGTTGGTGGGTAATATTCTTTCCGTTATGGATATTTCATGCAATTGTTGCTCGAGGAAGATTTTCACTACCCGCCCCATTAGTTCCGCATAATCGTCATTGGGCTCCATGCCATGCTGTTGTTGCGGCACCCTTGCTTATCACATTTGAATTGCTTCTTTGTATATATCTCGAGAGCCGTAATGTCCGTGGTTTCGCAGCTGTGAATTTGAAAACTGTTTTTGTTCCCTTACTGGCATTTGAAGTCATTATTTTAGTTGACAATTTCAGAATGTGTAAGGCGCTAATGCCAGGTGACGATGAAAGCATAAGTGATGAGGCAATATGGGAGACACTTCCTCACTTTTGGGTTGCAGTCTCGATGGCCTTCTTTGTTGCTGCTACGATCTTCACCCTTTTAAAGATATGTGGTGATGTTGGTGGTCTTGGCTGGTGGGACCTATTTATTAATTTTGGAATTGCCGAGTGCTTTGCTTTTCTTGTCTGTACAAAGTGGTCTAATCCTGTGATTCATAGAAGTCCTCACACAAGAGAAGCCGGTTCTTCCTCTAGAGTTGTTAGATATCTTGATTGGAGCAATGGGTTAGTAGTTTCTTCAGAGGAGGAGCAACTACAGAATAGAGTGTGTGGCCTTCAAGACATTGGCGGCCATATTATGAAGATTCCGATAATTGGTTTTCAAGTTCTCCTATGTATGCGCTTAGAGGGAACACCTGCTAGTGCGAAATATATTCCTCTTCCGTCTCTTTTCTTGCCGCTGTTTCTACTTCAAGGAACTGGTGTGCTTTTCTCAGCTTCAAGGTTGGTAGAGAAAGTTGTGCTTTTGTTACGGAGTGGATCTGGCACAGGAATATACTTTAGAATCTCTTCAAGAGCTCAGGATTGCTTTGAGTTCTTGCACCGTGGTTCAAGGCTACTGGGTTGGTGGTCTATTGATGAAGGAAGTAAAGAAGAACAGGCCAAACTTTTTCACGAGGAGGATTCTGGGTACAACACCTTTCGTGGTTTTCCTCCTGAGATGGTGAAGAAAATGCCTAAAAAGGATCTTGCTGAGGAAGTTTGGAGACTTCAAGCTGCTCTTGGTGAGCAGACAGAAATCACCAAATACAGCCAGCAAGAGTATGAGAGACTTCAAAATGAAAAGGTGATGTGTCGGGTTTGCTTCGAGGGAGAAATCAGTGTGGTCTTACTTCCATGTCGCCATAGAGTGCTTTGCAGCACCTGCTCGGAGAAGTGTAAAACATGCCCGATATGCCGTGTACCTATCGAGGAGTGCTTAGTTGTATTTGATGTTTAA 1404 43.95 MTWRRVLKAVQTLGAHTSLFCFTLLLVLKLDHVVSSSWWVIFFPLWIFHAIVARGRFSLPAPLVPHNRHWAPCHAVVAAPLLITFELLLCIYLESRNVRGFAAVNLKTVFVPLLAFEVIILVDNFRMCKALMPGDDESISDEAIWETLPHFWVAVSMAFFVAATIFTLLKICGDVGGLGWWDLFINFGIAECFAFLVCTKWSNPVIHRSPHTREAGSSSRVVRYLDWSNGLVVSSEEEQLQNRVCGLQDIGGHIMKIPIIGFQVLLCMRLEGTPASAKYIPLPSLFLPLFLLQGTGVLFSASRLVEKVVLLLRSGSGTGIYFRISSRAQDCFEFLHRGSRLLGWWSIDEGSKEEQAKLFHEEDSGYNTFRGFPPEMVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQNEKVMCRVCFEGEISVVLLPCRHRVLCSTCSEKCKTCPICRVPIEECLVVFDV 467
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 1760402 1766664 - Conep19aG0027200.1 Cone19ag0262 458699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0262 467 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 467 - -
Cone19ag0262 467 Pfam Transmembrane Fragile-X-F protein 28 292 IPR019396 -
Cone19ag0262 467 SUPERFAMILY RING/U-box 411 460 - -
Cone19ag0262 467 ProSiteProfiles Zinc finger RING-type profile. 420 455 IPR001841 -
Cone19ag0262 467 SMART ring_2 420 454 IPR001841 -
Cone19ag0262 467 Pfam Zinc finger, C3HC4 type (RING finger) 417 460 - -
Cone19ag0262 467 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 465 IPR013083 -
Cone19ag0262 467 FunFam Kinesin-like protein KIN-7D, mitochondrial 397 465 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0262 Cone-Chr19:1760402 Cone6ag0474 Cone-Chr6:2335120 1.24E-198 dispersed
Cone19ag0262 Cone-Chr19:1760402 Cone9ag0487 Cone-Chr9:2322803 6.76E-218 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0262 - - - 0.0