Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0280 ATGCGGATGAGTTGTAATGGATGCAGAGTACTTCGCAAAGGCTGCAGTGAAAATTGCTCTATTAGACCCTGCCTTCAGTGGATTAAAGTCCCTCAATCCCAAGCAAACGCCACCGTTTTCCTCGCCAAGTTTTACGGTCGAGCCGGCCTCGTTAACCTCATCAATGCCGGTCCAGAACCTCACCGACCCGCGATATTTAAATCGTTGCTATACGAAGCATGTGGCCGGATAGTGAACCCGATTTACGGTTCAGCTGGATTGTTATGGACCGGAAGCTGGCAGCTCTGCCAAGCGGCCGTAGAAGCCGTTCTAAAAGGTGCGCCAATAATGCCTATTTCGTCTGAATCGGCTGGGAGCCACATGAGCCCACCTCTGAAAGCATGTGATATTCGCCACGTGTCGAAGGATGATACCTTTGGACCGTCTGATAAGATTCATAAGGTGAACAAGTCTCGCAACCGGTTCAAGCGATCGGCTGTGAAAAAGCCGAAGCCGCGGAAAGCTGAGCTGGAGATGGCTACCGAGTTGAGATTTGACGAGCCATGCCAGATTGAATTGCCAAAGTGTTGTAAGATCGAGTCAGATGGATCGGTGAGTCATGATGAGTCGGAGAAGAGACGTCCTTGTCTCAGTCCAGGTGGTGAAAGCGGCGGCGAGGCTGATTGCGTGTCTGTTGAGACAGTAGAAGCTTCGGCTGTTAAGCCGGCTGATGAGCTAGCTGATTGCAGTGACGTGGAGTTGGAGCTAACGTTGGGCCGACACTGGAGTAACCCATATCCAAAAGAGAATGAAACCATGGACCGTGGGGATGATGACACGTGTCAGCATCAAACAGGGATTGATCTTCCTCCTGTTCGAAGTTTGCAACTCTAG 873 50.97 MRMSCNGCRVLRKGCSENCSIRPCLQWIKVPQSQANATVFLAKFYGRAGLVNLINAGPEPHRPAIFKSLLYEACGRIVNPIYGSAGLLWTGSWQLCQAAVEAVLKGAPIMPISSESAGSHMSPPLKACDIRHVSKDDTFGPSDKIHKVNKSRNRFKRSAVKKPKPRKAELEMATELRFDEPCQIELPKCCKIESDGSVSHDESEKRRPCLSPGGESGGEADCVSVETVEASAVKPADELADCSDVELELTLGRHWSNPYPKENETMDRGDDDTCQHQTGIDLPPVRSLQL 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2004222 2005429 - Conep19aG0029000.1 Cone19ag0280 458717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0280 290 MobiDBLite consensus disorder prediction 260 275 - -
Cone19ag0280 290 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Cone19ag0280 290 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Cone19ag0280 290 MobiDBLite consensus disorder prediction 253 290 - -
Cone19ag0280 290 MobiDBLite consensus disorder prediction 195 221 - -
Cone19ag0280 290 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 252 - GO:0010468(PANTHER)
Cone19ag0280 290 MobiDBLite consensus disorder prediction 195 209 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0317 Cone-Chr11:1550023 Cone19ag0280 Cone-Chr19:2004222 1.01E-72 dispersed
Cone13ag0829 Cone-Chr13:7525201 Cone19ag0280 Cone-Chr19:2004222 1.20E-52 dispersed
Cone19ag0280 Cone-Chr19:2004222 Cone19ag0834 Cone-Chr19:6592100 4.33E-52 dispersed
Cone13ag0286 Cone-Chr13:2136062 Cone19ag0280 Cone-Chr19:2004222 7.03E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45287 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0280 - - - 0.0