Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag0280 | ATGCGGATGAGTTGTAATGGATGCAGAGTACTTCGCAAAGGCTGCAGTGAAAATTGCTCTATTAGACCCTGCCTTCAGTGGATTAAAGTCCCTCAATCCCAAGCAAACGCCACCGTTTTCCTCGCCAAGTTTTACGGTCGAGCCGGCCTCGTTAACCTCATCAATGCCGGTCCAGAACCTCACCGACCCGCGATATTTAAATCGTTGCTATACGAAGCATGTGGCCGGATAGTGAACCCGATTTACGGTTCAGCTGGATTGTTATGGACCGGAAGCTGGCAGCTCTGCCAAGCGGCCGTAGAAGCCGTTCTAAAAGGTGCGCCAATAATGCCTATTTCGTCTGAATCGGCTGGGAGCCACATGAGCCCACCTCTGAAAGCATGTGATATTCGCCACGTGTCGAAGGATGATACCTTTGGACCGTCTGATAAGATTCATAAGGTGAACAAGTCTCGCAACCGGTTCAAGCGATCGGCTGTGAAAAAGCCGAAGCCGCGGAAAGCTGAGCTGGAGATGGCTACCGAGTTGAGATTTGACGAGCCATGCCAGATTGAATTGCCAAAGTGTTGTAAGATCGAGTCAGATGGATCGGTGAGTCATGATGAGTCGGAGAAGAGACGTCCTTGTCTCAGTCCAGGTGGTGAAAGCGGCGGCGAGGCTGATTGCGTGTCTGTTGAGACAGTAGAAGCTTCGGCTGTTAAGCCGGCTGATGAGCTAGCTGATTGCAGTGACGTGGAGTTGGAGCTAACGTTGGGCCGACACTGGAGTAACCCATATCCAAAAGAGAATGAAACCATGGACCGTGGGGATGATGACACGTGTCAGCATCAAACAGGGATTGATCTTCCTCCTGTTCGAAGTTTGCAACTCTAG | 873 | 50.97 | MRMSCNGCRVLRKGCSENCSIRPCLQWIKVPQSQANATVFLAKFYGRAGLVNLINAGPEPHRPAIFKSLLYEACGRIVNPIYGSAGLLWTGSWQLCQAAVEAVLKGAPIMPISSESAGSHMSPPLKACDIRHVSKDDTFGPSDKIHKVNKSRNRFKRSAVKKPKPRKAELEMATELRFDEPCQIELPKCCKIESDGSVSHDESEKRRPCLSPGGESGGEADCVSVETVEASAVKPADELADCSDVELELTLGRHWSNPYPKENETMDRGDDDTCQHQTGIDLPPVRSLQL | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 2004222 | 2005429 | - | Conep19aG0029000.1 | Cone19ag0280 | 458717 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag0280 | 290 | MobiDBLite | consensus disorder prediction | 260 | 275 | - | - | |
Cone19ag0280 | 290 | ProSiteProfiles | LOB domain profile. | 3 | 109 | IPR004883 | - | |
Cone19ag0280 | 290 | Pfam | Lateral organ boundaries (LOB) domain | 4 | 102 | IPR004883 | - | |
Cone19ag0280 | 290 | MobiDBLite | consensus disorder prediction | 253 | 290 | - | - | |
Cone19ag0280 | 290 | MobiDBLite | consensus disorder prediction | 195 | 221 | - | - | |
Cone19ag0280 | 290 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 252 | - | GO:0010468(PANTHER) | |
Cone19ag0280 | 290 | MobiDBLite | consensus disorder prediction | 195 | 209 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0317 | Cone-Chr11:1550023 | Cone19ag0280 | Cone-Chr19:2004222 | 1.01E-72 | dispersed | |
Cone13ag0829 | Cone-Chr13:7525201 | Cone19ag0280 | Cone-Chr19:2004222 | 1.20E-52 | dispersed | |
Cone19ag0280 | Cone-Chr19:2004222 | Cone19ag0834 | Cone-Chr19:6592100 | 4.33E-52 | dispersed | |
Cone13ag0286 | Cone-Chr13:2136062 | Cone19ag0280 | Cone-Chr19:2004222 | 7.03E-174 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45287 | None | None | None | None | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag0280 | - | - | - | 0.0 |