Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0295 ATGCACTGTTCACTCCCCGTTTTGATCTTTCTTTGTCTAATTACCCACTCAAACTCGATTAAATTCAACTTCCCAGATTTCAAATCAAACAAGGAGGTCTTAACCTTGCAAAACGATACCTTCTTCTCATCAGATGGAATCATCCAACTCACAAAAAATCAAGCCGATCGCTCCTTGGATCATAGTGTTGGCCGTGCTTCCTTTTCTCGACCAGTACACCTTTGGAATAGGGATACAGGCAGAATGACAGGCTTCACTACTCATTTCTCATTCTCAATTAGAGCAATTGATGAAGTTTTTGGTGATGGTCTGTCCTTCTTTATTGCCCCATTCAACTCGAGCATTCCGAACAATTCAAGCGGAGGATTCCTTGGCCTTTTCAGTTCTGAATCTGCTAGGAACTCCTCGAAGAATCAAATTGTTGCCGTTGAGTTTGACACCTTTCTGAACGATTGGGATCCGGGTCCCGATCACATCGGAATCAATATCAATTCTATTGAATCCGTGAAGAGTCTTGTGTGGAATAGTACCATGAAAAATGGCACTATAGGGAATGCATGGATAAGCTATAACTCCACCACCCAAAACTTGACTGTGTTTCTTACTTATGCTCAAAATCCAGTGTTTATTAATGGAGATTGCAGTCTTTACTATATCATTGATTTAAGAAAGGTATTACCGGAATGGGTTGAAGTTGGTTTCTCAGCGGCAACAGGCGACTGGGTTGAAATCCACAACATCCTTTCTTGGTCGTTTAATTCAAGCCTTGAGGATGATGTCGGGAAAAGAAAGAAAGACCATGTAGGGTTAACTATTGGCTTAACTACCTGTTTCGGTGTTTTGGGTTGTGGAATAGGTGTGTTCTGGATTATTGTTTGGAAAAGAAAGGCTGGCAGAAAGAAATCAGAGGGAGGAATTGACGTCTCAATGGATCATGAATTTGAGCAAGGAACTGGACCAAAAAGATTCATCTACCGGGAATTAAATCGAGCAACCAACTATTTTGATGAGGCGGGAAAGCTTGGTGAAGGAGGCTTTGGTGGTGTTTACAAGGGATTGTTAAATGAATCCAATACAGAAGTAGCAGTAAAAAGAGTTTCAAGAGGATCAAAGCAGGGTAAAAAGGAGTATATATCTGAAGTGAAAACTATTAGCCGTTTGCGACACAGAAATTTGGTGCAACTCATCGGGTGGTGTCATGAACAAGGTGAGCTCCTTTTGGTGTACGAGTTTATGCCCAATGGTAGCCTTGATTACCATCTCTTCAAAGCAAAAGTAGTTGTTCTAACATGGACAATCAGGTACAAAATAGTTCTTGGGTTGGCTTCTGCCTTATTGTATCTCCATGAAGAATGGGAACAATGTGTTGTTCACAGAGATATTAAATCTAGCAATATAATGTTGGACTCAAATTTCAACGCAAAGCTTGGCGACTTTGGTCTGGCAAGGCTTGTAGATCATGATCTTGGTTCACAAACAACGGTTTTGGCTGGAACAATGGGCTACTTAGCACCAGAATGTGTTACATTGGGCAAGGCAAGCAAAGAGTCAGATGTGTATAGTTTTGGAGTTGTGGCATTAGAGATAGCTGCTGGAAGACGACCAGTCGACACGAGGGCAGAAGCCGAAAAGATAAGGCTTGTAGAATGGGTATGGGGGCTGTATGGACAAGGCCAAGTGCTTGAAGCTGCAGATAAGGCATTAAATACAGAATTCGACGAGAAACAAATGAAGTGCTTAATGGTGGTTGGATTGTGGTGTTGCCATCCCGACTTCACAGTTAGACCCTCTATACGACAAGTCATTAATGTCCTAAATTTTGAAGCCCCATTGCCAATCCTACCATCAAAGTTGCCTGTGCCAATGTATTTTGCACCTCCTTTGCCCTTGTGTAGGTTTTCTTATACATCATCTGGACCCACTGGGTCAATGAAATATCACAGTCAATGTACATGTAGTAGTTGCTCAACGAACTCGTCTCTGTATGCAGGGTCTGGAAAGTCTCTTTTGGGTCCTATGAGAACTTATGTTGCTCAGTAG 2040 41.96 MHCSLPVLIFLCLITHSNSIKFNFPDFKSNKEVLTLQNDTFFSSDGIIQLTKNQADRSLDHSVGRASFSRPVHLWNRDTGRMTGFTTHFSFSIRAIDEVFGDGLSFFIAPFNSSIPNNSSGGFLGLFSSESARNSSKNQIVAVEFDTFLNDWDPGPDHIGININSIESVKSLVWNSTMKNGTIGNAWISYNSTTQNLTVFLTYAQNPVFINGDCSLYYIIDLRKVLPEWVEVGFSAATGDWVEIHNILSWSFNSSLEDDVGKRKKDHVGLTIGLTTCFGVLGCGIGVFWIIVWKRKAGRKKSEGGIDVSMDHEFEQGTGPKRFIYRELNRATNYFDEAGKLGEGGFGGVYKGLLNESNTEVAVKRVSRGSKQGKKEYISEVKTISRLRHRNLVQLIGWCHEQGELLLVYEFMPNGSLDYHLFKAKVVVLTWTIRYKIVLGLASALLYLHEEWEQCVVHRDIKSSNIMLDSNFNAKLGDFGLARLVDHDLGSQTTVLAGTMGYLAPECVTLGKASKESDVYSFGVVALEIAAGRRPVDTRAEAEKIRLVEWVWGLYGQGQVLEAADKALNTEFDEKQMKCLMVVGLWCCHPDFTVRPSIRQVINVLNFEAPLPILPSKLPVPMYFAPPLPLCRFSYTSSGPTGSMKYHSQCTCSSCSTNSSLYAGSGKSLLGPMRTYVAQ 679
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2154855 2156894 - Conep19aG0030600.1 Cone19ag0295 458732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0295 679 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 257 IPR013320 -
Cone19ag0295 679 Pfam Protein kinase domain 337 603 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0295 679 Gene3D - 17 270 - -
Cone19ag0295 679 ProSitePatterns Protein kinases ATP-binding region signature. 341 364 IPR017441 GO:0005524(InterPro)
Cone19ag0295 679 CDD lectin_legume_LecRK_Arcelin_ConA 20 256 IPR001220 GO:0030246(InterPro)
Cone19ag0295 679 FunFam Lectin-domain containing receptor kinase A4.3 412 625 - -
Cone19ag0295 679 ProSiteProfiles Protein kinase domain profile. 335 614 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0295 679 Gene3D Transferase(Phosphotransferase) domain 1 412 625 - -
Cone19ag0295 679 Gene3D Phosphorylase Kinase; domain 1 320 411 - -
Cone19ag0295 679 SMART serkin_6 335 605 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0295 679 PANTHER - 34 636 IPR050528 GO:0005886(PANTHER)
Cone19ag0295 679 ProSitePatterns Legume lectins alpha-chain signature. 226 235 IPR000985 -
Cone19ag0295 679 FunFam L-type lectin-domain containing receptor kinase IX.1 18 265 - -
Cone19ag0295 679 CDD STKc_IRAK 349 606 - -
Cone19ag0295 679 SUPERFAMILY Protein kinase-like (PK-like) 318 627 IPR011009 -
Cone19ag0295 679 Pfam Legume lectin domain 20 259 IPR001220 GO:0030246(InterPro)
Cone19ag0295 679 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0295 679 FunFam L-type lectin-domain containing receptor kinase IX.1 320 411 - -
Cone19ag0295 679 ProSitePatterns Legume lectins beta-chain signature. 141 147 IPR019825 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0295 Cone-Chr19:2154855 Cone6ag1512 Cone-Chr6:11949123 1.52E-205 dispersed
Cone19ag0295 Cone-Chr19:2154855 Cone3ag1076 Cone-Chr3:29405308 8.06E-217 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82372 PF04433 SWIRM 4.20E-25 CL0123 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0295 - - - 0.0