Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0303 ATGAAGAACTCGTTTGGTGTAATAGTGTTTCTCTTTGCGCTTCCACTGGTCTTTGCTGACTTACAAGTAGGTTTCTATAGTTCTTCTTGCCCAAGAGCAGAAACAATTGTGCAACAAGTAGTTCAACGAAATTTCAAGAAGGATCGAACCATAACAGCGGCGTTGCTCCGCATGCATTTTCATGACTGCTTTGTTAGGGGTTGCGATGCATCTATACTCATAGATTCGACTAAGAAGAAAAAATCAGAAAAATCTGCAGGATCAAACCGCACCGTGAGAGGCTATGAGCTAATTGATGAGGTAAAGAAGACCTTGGAGGCTCAGTGTCCTTCAACAGTTTCTTGTGCAGATATCATAACACTTGCAACCCGTGATGCTGTAGCCATGGCAGGAGGCCCTAAATATACAGTTCCAACCGGCAGGCGCGATGGGTTAGTTTCCAATCCTTCAGAAGTGAACTTGCCTGGTCCATCGTCTTCTGTTTCCGGTGCATTACAAACTTTTACAGAAAAAGGGTTGGACCTAAATGATATGGTAACCCTTTTGGGGGCACACAGTGTTGGTGTGGCACATTGTAGTTTTTTCCAAGATAGACTTACGCCTCCCGATCCTTCAATGGAAACTACTTTAGCGGCTAAGCTTAAAAGTGATTGTGCATCAACATCTAACAATGACCCTGCAATATTTTTGGACCAAAACACGTCTTTTGTTATGGATAATCAATTCTACAATCAAATTCAGTCGAAGAAAGGCATATTGCAAATAGACCAGGAACTCACTTCCGACAGCTCGTCATCTATTGTTGTTTCGGGTTTTGCTTCTGACGATGTTCGATTTAGTCGCAGTTTTGCGGATGCTATGGTAAAGATGGGAAACATCAAAGTTTTGGAGGGCAATGCTGGAGAGATTAGAAAAAAATGTAGTGTCTTTAATTCCCATATATCACCCAGACCTTAA 957 42.11 MKNSFGVIVFLFALPLVFADLQVGFYSSSCPRAETIVQQVVQRNFKKDRTITAALLRMHFHDCFVRGCDASILIDSTKKKKSEKSAGSNRTVRGYELIDEVKKTLEAQCPSTVSCADIITLATRDAVAMAGGPKYTVPTGRRDGLVSNPSEVNLPGPSSSVSGALQTFTEKGLDLNDMVTLLGAHSVGVAHCSFFQDRLTPPDPSMETTLAAKLKSDCASTSNNDPAIFLDQNTSFVMDNQFYNQIQSKKGILQIDQELTSDSSSSIVVSGFASDDVRFSRSFADAMVKMGNIKVLEGNAGEIRKKCSVFNSHISPRP 318
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2271999 2273229 + Conep19aG0031400.1 Cone19ag0303 458740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0303 318 ProSiteProfiles Plant heme peroxidase family profile. 20 311 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 Gene3D - 24 311 - -
Cone19ag0303 318 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Plant peroxidase signature 131 146 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Plant peroxidase signature 30 49 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Plant peroxidase signature 245 262 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Plant peroxidase signature 112 122 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Plant peroxidase signature 54 74 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Plant peroxidase signature 93 106 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Plant peroxidase signature 285 298 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Plant peroxidase signature 229 244 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 ProSitePatterns Peroxidases active site signature. 52 63 IPR019794 GO:0004601(InterPro)
Cone19ag0303 318 PRINTS Haem peroxidase superfamily signature 52 66 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Haem peroxidase superfamily signature 113 130 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 PRINTS Haem peroxidase superfamily signature 131 143 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Cone19ag0303 318 FunFam Peroxidase 24 164 - -
Cone19ag0303 318 PANTHER PEROXIDASE 25-RELATED 16 307 IPR000823 GO:0004601(PANTHER)|GO:0004601(InterPro)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cone19ag0303 318 CDD secretory_peroxidase 21 310 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone19ag0303 318 Pfam Peroxidase 37 275 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0303 318 Gene3D Peroxidase, domain 2 155 290 - -
Cone19ag0303 318 FunFam Peroxidase 155 290 - -
Cone19ag0303 318 SUPERFAMILY Heme-dependent peroxidases 20 311 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1398 Cone-Chr11:10091311 Cone19ag0303 Cone-Chr19:2271999 1.37E-90 dispersed
Cone16ag0371 Cone-Chr16:6098852 Cone19ag0303 Cone-Chr19:2271999 2.74E-73 dispersed
Cone19ag0303 Cone-Chr19:2271999 Cone8ag1449 Cone-Chr8:11205720 1.61E-83 dispersed
Cone19ag0303 Cone-Chr19:2271999 Cone1ag1577 Cone-Chr1:57476686 1.60E-86 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0303 K00430 - mdm:103453913 425.631