Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0309 ATGGCTTTCCAAGCCAAAAAGCTCATCAACAATCCCGATGATGTGGTGACTGAGTTCATTGAGGGTCTGGTGGAAACATATTCGGGGTTGCAGTACTTAGATGGCTTTCCTGAGGTAAAGGTAGTTGTACGTGCTGCTGTTTCAGGTGCAACATATGATAAGGTGGCAATTATATCAGGGGGTGGAAGCGGACATGAGCCTTCACATGCTGGATTTGTTGGGGAAGGAATGCTGACAGCAGCTATTTGTGGGGATATCTTTACCTCTCCACCGGTCGATTCAATTCTAGCTGGCATTCGAGCAGTAACTGGTCATATGGGGTGCCTTTTGATCGTCAAGAACTACACCGGTGATCGGTTAAATTTCGGTTTGGCTGCTGAGCAAGCAAAATCCGAAGGTTACAAAGTAGAAAGCGTAATTGTTGGGGATGATTGTGCTTTACCCTCACCTCGAGGCATAGCTGGCCGTAGAGGTTTAGCTGGGACTATCCTTGTTCATAAGGTGGCTGGAGCTGCTGCTGCTGCAGGGCTTTCTCTTGCTGATGTTGCTGCAGAGGCAAAACATGCCACTGAAATTATTGGGACAATGGGAGTAGCATTGTCTGTTTGCACACTGCCTGGCCAGGGTACATCAGATCGATTAGGTCCTGGAAAGATGGAACTTGGTCTTGGTATTCATGGTGAACCTGGTTCATCTGCGGTCAATATTCAGCCTGTTGATGCCATAATATCTCATGTTCTTAAGCAGATTTTATCACCGGAAAGTAACTACCTTCCAATCACGCGTGGGGATAGAGTGGTGCTCATGGTTAATGGGTTAGGTTCTACGCCAGGAATTGAATTAATGATTGCATCAGGGAGAGCAGTTCCTATGTTGAAGCTGGAACATGGACTGGTTGTTGATAGAGTGTATACAGGGTCATTTATGACTTCTCTTGATATGGCAGGATTTTCAATTACAATCATGAAAGTAGATGAAGCAATTTTGACACGCTTGGATGCCCCCACAAAAGCTCCATCCTGGCCTGTTGGTGTTGATGGTAGTCGCCCACCTCCGAAGGTACCTCTTCCAGTGTCACCATCTCACTTGACAAAGAGTGTTGAGAAATTAGGTAGGCCCCCTCAACTAAGCCAGCAAGGGAAAATACTTGAAACTGCTATTGAGGCAGCTGCAAATGCCATTATCAATATGAAGGACAGTCTGAACGAATGGGATGGAAAAGTTGGTGATGGTGATTGTGGGTCCACGATGAGTAAAGGTGCAACTGCAATCCTTGATGACTTGAAAAACTATCCCCTGAACGACGCTGCTGAGACAGTGAATGAGATTGGAGGATCCATTAGAAGAGTTATGGGAGGAACGAGCGGGATCATATATACCATATTTTCCAAGGCAGCATATGCCATATTGAAAACAAGCAATGAGTCATATGTGAAACCTGAATTATGGGCTAAAGCTCTGGAAGCTTCCATAGCTGCAATTAGTAAATATGGTGGGGCTCGTGCTGGTTACCGTACATTGTTAGATGCCCTAATTCCAGCATCAGAAGTTCTTTCTCAGAGGTTAACAGCCGGTGATGATGGTATTACTGCTCTTGTTCTCTCGTCGGAAGCAGCATTAGCTGGAGCTGAGGCAACAAAAAACATGGAAGCCCTGGCTGGTAGGTCATCCTATGTGGTTGGAGAAAATCTTGCATCAACCCCGGACCCAGGGGCAATGGCTGTAGGATCATGGTACCGAGCAGCGGCCTTAGTGGTAAAGGATAAATGCCAAAGCTCCATGATCTGA 1788 46.2 MAFQAKKLINNPDDVVTEFIEGLVETYSGLQYLDGFPEVKVVVRAAVSGATYDKVAIISGGGSGHEPSHAGFVGEGMLTAAICGDIFTSPPVDSILAGIRAVTGHMGCLLIVKNYTGDRLNFGLAAEQAKSEGYKVESVIVGDDCALPSPRGIAGRRGLAGTILVHKVAGAAAAAGLSLADVAAEAKHATEIIGTMGVALSVCTLPGQGTSDRLGPGKMELGLGIHGEPGSSAVNIQPVDAIISHVLKQILSPESNYLPITRGDRVVLMVNGLGSTPGIELMIASGRAVPMLKLEHGLVVDRVYTGSFMTSLDMAGFSITIMKVDEAILTRLDAPTKAPSWPVGVDGSRPPPKVPLPVSPSHLTKSVEKLGRPPQLSQQGKILETAIEAAANAIINMKDSLNEWDGKVGDGDCGSTMSKGATAILDDLKNYPLNDAAETVNEIGGSIRRVMGGTSGIIYTIFSKAAYAILKTSNESYVKPELWAKALEASIAAISKYGGARAGYRTLLDALIPASEVLSQRLTAGDDGITALVLSSEAALAGAEATKNMEALAGRSSYVVGENLASTPDPGAMAVGSWYRAAALVVKDKCQSSMI 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2359594 2377431 + Conep19aG0032000.1 Cone19ag0309 458746

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0309 595 FunFam Dihydroxyacetone kinase 1 193 345 - -
Cone19ag0309 595 Gene3D Dihydroxyacetone kinase; domain 1 16 191 - -
Cone19ag0309 595 Pfam Dak1 domain 35 339 IPR004006 GO:0004371(InterPro)|GO:0006071(InterPro)
Cone19ag0309 595 SUPERFAMILY DAK1/DegV-like 6 343 - -
Cone19ag0309 595 Gene3D Dihydroxyacetone kinase; domain 2 193 345 - -
Cone19ag0309 595 ProSiteProfiles DhaL domain profile. 381 584 IPR004007 GO:0004371(InterPro)|GO:0006071(InterPro)
Cone19ag0309 595 SMART Dak2_2 407 584 IPR004007 GO:0004371(InterPro)|GO:0006071(InterPro)
Cone19ag0309 595 NCBIfam glycerone kinase 6 582 IPR012734 GO:0004371(InterPro)|GO:0005524(InterPro)|GO:0006071(InterPro)
Cone19ag0309 595 ProSiteProfiles DhaK domain profile. 11 341 IPR004006 GO:0004371(InterPro)|GO:0006071(InterPro)
Cone19ag0309 595 SUPERFAMILY DhaL-like 371 582 IPR036117 GO:0004371(InterPro)|GO:0006071(InterPro)
Cone19ag0309 595 FunFam Dihydroxyacetone kinase, DhaK subunit 16 191 - -
Cone19ag0309 595 PANTHER TRIOKINASE/FMN CYCLASE 5 583 IPR050861 GO:0004371(PANTHER)|GO:0005829(PANTHER)|GO:0019563(PANTHER)
Cone19ag0309 595 Gene3D - 378 587 IPR036117 GO:0004371(InterPro)|GO:0006071(InterPro)
Cone19ag0309 595 Pfam DAK2 domain 407 582 IPR004007 GO:0004371(InterPro)|GO:0006071(InterPro)
Cone19ag0309 595 FunFam Dihydroxyacetone kinase, L subunit 378 587 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0309 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g944 . . . . . . . Bma12g01273 Cmo13g01209 . . . . . . . . . . . . . . . . . . . . . . . . . Cone19ag0309 Lsi02g00014 Csa01g00489 Chy12g01592 Cme12g02050 . Blo15g00052 . . Bpe07g01078 . . . . . . . . Car13g00981 . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003104 1 8 1 1 2 1 1 3 2 3 1 1 1 1 1 1 2 1 1 3 1 1 1 2 3 1 1 2 3 1 52