Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0319 ATGGAGACAGACCTTGAAGCTGTCATACGTGATCGAAACATATTTCTCTCACCAGCTGACATAAAATCGTATATACAGATGACACTGAAAGGCCTTGTTATTTGCCACAAGAAATGGGTTTTACATAGGGACATGAAGCCAAACAATTTGTTGATAGGATCTAATGGACAACTTAAAATTGCAGATTTTGGTTTGGCTCGAATATTTGGTAGTCCAGATCGCAGATTTACTCATCAGGTATTTGCTCGATGGTATAGAGCGCCTGAGCTGCTGTTTGGTACCAAGCAGTATGGTTCTGGGGTAGATGTTTGGGCTGCAGCTTGTATATTTGCTGAGCTTCTCCTCCGTCGACCTTTTCTCCAGGGTTCGAGTGACATTGATCAATTAGGAAAGATCTTTGCAGCTTTTGGGACACCTACACCTTCACAGTGGCCTGATATGGCATTCCTGCCTGATTATGTGGAGTACCAATATGTTCCTTCACCTCCTTTACGATCATTATTTCCAATGGCAAGTGATGACACCCTAGATCTCCTAGCAAAGATGTTTACTTATGATCCCAAATCCAGAATTTCAGTTCAGCAGGCATTAGAGCACAGGTACTTTTCCTCAGCTCCTCCACCTACTGATCCTGATAAATTGCCTAGACCTCGTCCGAAGCGCGACTCGGGGGCTCCTGATGTTAACCTGAATGAGGGTCCGACAGTGCTCTCACCTCCAAGAAAATCAAGAAGAGTAATGCCAGAACGTGAAGGATTTGAAGGAAATGCACACCGAGTTGATAAATTGGATGATCATGGTAATGATGTTAGGCAAGCAGGTCCTGAAAATGCAAGCAAGAACGAACCAGTGCCTATGTCAGTTGATTTTTCTATTTTTGGCGCTAAACCTCCAAATAGACCAACAATTAACAGTGCTGACAGATCACATCTGAAAAGGAAATTAGATCTTGAGTTCCAGCAATGA 966 43.17 METDLEAVIRDRNIFLSPADIKSYIQMTLKGLVICHKKWVLHRDMKPNNLLIGSNGQLKIADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGSGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDMAFLPDYVEYQYVPSPPLRSLFPMASDDTLDLLAKMFTYDPKSRISVQQALEHRYFSSAPPPTDPDKLPRPRPKRDSGAPDVNLNEGPTVLSPPRKSRRVMPEREGFEGNAHRVDKLDDHGNDVRQAGPENASKNEPVPMSVDFSIFGAKPPNRPTINSADRSHLKRKLDLEFQQ 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2517131 2526236 - Conep19aG0033000.1 Cone19ag0319 458756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0319 321 MobiDBLite consensus disorder prediction 201 321 - -
Cone19ag0319 321 Pfam Protein kinase domain 3 202 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0319 321 MobiDBLite consensus disorder prediction 306 321 - -
Cone19ag0319 321 FunFam Putative cyclin-dependent kinase 7 3 218 - -
Cone19ag0319 321 PANTHER CELL DIVISION PROTEIN KINASE 1 202 IPR050108 GO:0004674(PANTHER)|GO:0004693(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0045944(PANTHER)|GO:0070985(PANTHER)
Cone19ag0319 321 ProSitePatterns Serine/Threonine protein kinases active-site signature. 40 52 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0319 321 MobiDBLite consensus disorder prediction 243 271 - -
Cone19ag0319 321 ProSiteProfiles Protein kinase domain profile. 1 202 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0319 321 SUPERFAMILY Protein kinase-like (PK-like) 2 209 IPR011009 -
Cone19ag0319 321 Gene3D Transferase(Phosphotransferase) domain 1 3 218 - -
Cone19ag0319 321 SMART serkin_6 1 202 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0331 Cone-Chr13:2766449 Cone19ag0319 Cone-Chr19:2517131 3.14E-228 dispersed
Cone19ag0319 Cone-Chr19:2517131 Cone5ag0397 Cone-Chr5:1698040 4.60E-56 dispersed
Cone19ag0319 Cone-Chr19:2517131 Cone1ag1406 Cone-Chr1:56782156 3.26E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82373 PF07724 AAA_2 2.30E-55 CL0023 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0319 K02202 - mdm:103415531 573.548