Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0357 ATGTTTGGCACCTTTCTGTCACTGCAGATTTATAAATCAACACTAACTCGATTTACAGATGCTGGTGGCTTGGTTGGAAATTCTCCAGCCGAAGTATCTAAAGATGTTGATGTACTTGTAATCATGGTTACAAATGAAGTACAAGCCGAGGGTGTTTTGTATGGAGAATTTGGAGCTGTTTCAGCCCTTCCATCCGGAGCTTCAATTATTTTATCATCTACAGTTTCTCCTGGATTTGTGTACGACTTACAGCATCGCTTGCAAAATGAAGGCAAGCATTTAAAATTGGTTGATGCTCCAGTTTCTGGAGGTGTTCAGAGAGCCTCAAATGGGACTCTTACGATAATGGCTTCTGGCACAGATGAAGCGCTTAAGAGTGCTGGTTCAGTTCTGTCAGCATTAAGCGAGAAGCTATATATTATCAAAGGAGGTTGTGGTGCTGGAAGTGGTGTAAAGATGGTTAATCAATTGCTTGCTGGAGTTCATATAGCATCAGCTGCTGAGGCAATGGCATTTGGAGCTCGGTTGGGTCTTAATTCACGGATTTTGTTTGAAATCATCAGAAATAGTGTTGGAACTTCCTGGATGTTTGAAAACCGTGGTCCGCACATGCTGAATAATGATTATACACCTTACTCTGCACTTGATATCTTTGTGAAGGACCTGGGAATTGTTACTCGTGAAGGCACATCTCATAAAGTTTCCCTTCCTGTTTCAACAGTTGCGCACCAGCTGTTCCTGTCTGGTTCTGCTGCAGGCTGGGGCCGGCAAGATGATGCTGGTGTTGTTAAGTTCTATGAGACACTTACTGGTATCAAGGTTGAAGGAAAACCTCCCATTCCCAAGAAAGAAGCTGTATTAAAGTCCCTTCCATCTGAATGGCCAGTAGATCCTATCGATGACATACAAAGACTAAGCCAGAATAATTCCAACATTTTAATTGTGCTGGATGATGACCCAACTGGAACCCAAACTGTTCATGATATTGATGTATTGACAGAATGGAGTGTTGAGTCTCTTGTTGGAAAGTTCCATAAAGCTCCCAAATGCTTTTTTATTTTGACTAACTCCAGAGCACTGAGTTCGGACAAGGCTACTGCCTTGATAAAAGAAATCTGCAAGAACATATATACTGCATCAGAATCTGTTAAAAACACCAATTATACGGTTGTTTTGAGAGGTGATTCAACCTTAAGAGGTCACTTTCCAGAGGAAGCTGATGCGGCTGTTTCAGTCCTAGGTGAGATGGATGCATGGATCATCTGCCCCTTCTTTCTCCAAGGAGGCCGTTATACTATTGGGGATGTTCACTATGTTGCAGATTCTGAACAGCTTGTACCAGCTGGGGACACAGAGTTTGCAAAGGACGCTTCATTTGGTTATAAATCTTCGAACCTTCGTGAGTGGGTAGATGAAAAAACAGCTGGTCGCATAAAAGCAAACAGTGTCAGCTCTATTTCTATTCAACTTATAAGAAAAGGCGGACCAGATGCTGTTTGTGAGCACTTATGCAGTTTACAAAAGGGCTCCACATGCATAGTAAACGCAGCTAGTGACAGAGACATGGCTGTCTTTGCCGCTGGAATGATCAAGGCAGAGCTAAAGGGTAAGCGTTTCTTGTGCCGTACTGCTGCTAGCTTTGTTTCTGCCAGGATTGGAATTATCCCTATAGCCCCACTTCTGCCTAAGGATCTTGGAATAAACAAAAAAAGGAATGGTGGTCTCATAGTTGTAGGGTCTTATGTTCCCAAAACAACAAAACAGGTTGAAGAACTTAAGTCAAAATGTGGCACCATATTAAGAAACATCGAGGTTTCTGTAGCTAGACTTGCTCTCAGGTCTGCAGAAGAGAGGCAAGAAGAAATTAGGAGAACCTCTGAGTTGGCAAGTATTTTTCTGAAGGCTCGCAAGGACACTCTTATAATGACTAGCCGAGAGCTCATCATTGGAAAGAGCCCTGCTGAGAGCTTGGAGATCAACTCCAAAGTGAGTTCTGCACTAGTGGAAATAGTTAAAGGAATAACTACAAAACCTCGCTACATTCTTGCTAAGGGTGGAATCACCTCATCAGACCTTGCCACAAAAGCTCTTGAAGCAAAAAGTGCGAGAATAGTTGGACAAGCCCTGCCCGGTGTTCCATTATGGCAGCTAGGCCCTGAAAGCAGACTTCCGGGAGTTCCATACATCGTTTTCCCTGGTAATGTTGGTGATAGTAAAGCATTAGCAGAGCTAGTCAATTCTTGGTCTAGTCCAGTTAGAGTTTCATCAACAAAAGAGATTCTTCTTGATGCAGAAAGGGGTGGATATGCTGTTGGGGCATTTAATATCTATAATTTAGAGGGAGCTGAGGCAGTCGTGACTGCGGCAGAGCAGGAAAAAAGTCCTGCAATATTACAGATCCATCCAGCTGCCCTAAAGCAAGGTGGGCTTCCATTGGTTGCGTGTTGTATATCTGCTGCTGAACAAGCCAGTGTTCCCATTACTGTTCACTTTGATCATGGAAATTCAAAGCTAGATCTGTTGGAAGCTCTTGAATCAGGATTTGATTCCGTAATGGTAGACGGCTCACATCTTTCCTTCAAGGAGAATGTTACCTACACAAAGTCTATTTCATCCCTGGCTCACTCAAAAGACATGCTGGTGGAAGCTGAACTTGGGAGGTTGTCAGGGACAGAAGACGACTTAACTGTTGAACATTATGAAGCGAAGCTGACTGATGTTAATCAGGCTGAAGAGTTCATTGATGAGACTGGTGTAGATGCTTTGGCAGTGTGTATTGGTAACGTCCATGGGAAATACCCATCAAGTGGACCAAATCTCAGACTTGATTTACTCAAGGATTTGCATGCTCTGTGTTCGAAGAGAGGAGTGTTTCTAGTGCTTCATGGAGCATCTGGCTTGCCCGAGGATCTTGTCAAGGGATGTATCAAACGGGGTGTGAGGAAGTTCAATGTAAACACTGAGGTGAGAAAGGCTTACATGGATTCCTTGAATAAGCCAAGCAAAGATTTAGTCCATGTCATGGAATCTGCAAAGGCTGCAATGAAGGCTGTGGTCTCAGACAAGATGCATCTGTTTGGCTCTGCAGGGAAAGCATAA 3099 43.4 MFGTFLSLQIYKSTLTRFTDAGGLVGNSPAEVSKDVDVLVIMVTNEVQAEGVLYGEFGAVSALPSGASIILSSTVSPGFVYDLQHRLQNEGKHLKLVDAPVSGGVQRASNGTLTIMASGTDEALKSAGSVLSALSEKLYIIKGGCGAGSGVKMVNQLLAGVHIASAAEAMAFGARLGLNSRILFEIIRNSVGTSWMFENRGPHMLNNDYTPYSALDIFVKDLGIVTREGTSHKVSLPVSTVAHQLFLSGSAAGWGRQDDAGVVKFYETLTGIKVEGKPPIPKKEAVLKSLPSEWPVDPIDDIQRLSQNNSNILIVLDDDPTGTQTVHDIDVLTEWSVESLVGKFHKAPKCFFILTNSRALSSDKATALIKEICKNIYTASESVKNTNYTVVLRGDSTLRGHFPEEADAAVSVLGEMDAWIICPFFLQGGRYTIGDVHYVADSEQLVPAGDTEFAKDASFGYKSSNLREWVDEKTAGRIKANSVSSISIQLIRKGGPDAVCEHLCSLQKGSTCIVNAASDRDMAVFAAGMIKAELKGKRFLCRTAASFVSARIGIIPIAPLLPKDLGINKKRNGGLIVVGSYVPKTTKQVEELKSKCGTILRNIEVSVARLALRSAEERQEEIRRTSELASIFLKARKDTLIMTSRELIIGKSPAESLEINSKVSSALVEIVKGITTKPRYILAKGGITSSDLATKALEAKSARIVGQALPGVPLWQLGPESRLPGVPYIVFPGNVGDSKALAELVNSWSSPVRVSSTKEILLDAERGGYAVGAFNIYNLEGAEAVVTAAEQEKSPAILQIHPAALKQGGLPLVACCISAAEQASVPITVHFDHGNSKLDLLEALESGFDSVMVDGSHLSFKENVTYTKSISSLAHSKDMLVEAELGRLSGTEDDLTVEHYEAKLTDVNQAEEFIDETGVDALAVCIGNVHGKYPSSGPNLRLDLLKDLHALCSKRGVFLVLHGASGLPEDLVKGCIKRGVRKFNVNTEVRKAYMDSLNKPSKDLVHVMESAKAAMKAVVSDKMHLFGSAGKA 1032
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2952084 2968805 + Conep19aG0037000.1 Cone19ag0357 458794

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0357 1032 Gene3D Aldolase class I 748 1032 IPR013785 -
Cone19ag0357 1032 Gene3D - 5 142 - -
Cone19ag0357 1032 CDD TBP_aldolase_IIB 757 1030 IPR000771 GO:0005975(InterPro)|GO:0008270(InterPro)|GO:0016832(InterPro)
Cone19ag0357 1032 Gene3D - 143 275 IPR013328 -
Cone19ag0357 1032 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 12 139 IPR006115 GO:0050661(InterPro)
Cone19ag0357 1032 NCBIfam ketose-bisphosphate aldolase 754 1032 IPR000771 GO:0005975(InterPro)|GO:0008270(InterPro)|GO:0016832(InterPro)
Cone19ag0357 1032 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 138 IPR036291 -
Cone19ag0357 1032 Pfam Sugar-binding N-terminal domain 313 550 IPR010737 -
Cone19ag0357 1032 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 146 266 IPR029154 GO:0051287(InterPro)
Cone19ag0357 1032 PANTHER 3-HYDROXYISOBUTYRATE DEHYDROGENASE-LIKE 1, MITOCHONDRIAL-RELATED 10 1031 - -
Cone19ag0357 1032 Gene3D - 312 551 IPR037051 -
Cone19ag0357 1032 Pfam Nucleotide-binding C-terminal domain 575 741 IPR031475 -
Cone19ag0357 1032 Gene3D - 566 747 IPR042213 -
Cone19ag0357 1032 SUPERFAMILY Aldolase 755 1032 - -
Cone19ag0357 1032 Pfam Fructose-bisphosphate aldolase class-II 756 1031 IPR000771 GO:0005975(InterPro)|GO:0008270(InterPro)|GO:0016832(InterPro)
Cone19ag0357 1032 SUPERFAMILY YgbK-like 313 745 - -
Cone19ag0357 1032 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 145 273 IPR008927 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0357 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g180 . . Bda06g00824 . . . . Bma12g01248 . . . . Car10g00316 . . . . Bhi02g00155 . . . Hepe09g0400 . . Cla06g01412 Cam06g1565 Cec06g1625 Cco06g1617 Clacu06g1527 Cmu06g1481 Cre06g2290 . . . Cone19ag0357 . . . . . Blo15g00055 . . Bpe07g01052 . . . . Cmo10g00361 . . . . . . . . . . . . . . . . . . . . . Lsi06g01272 Csa01g00444 Chy02g02301 Cme02g01672
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009138 1 5 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 34