Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0360 ATGGAGTTGGTAGGGGAGAAGAAGGAATCGGAGAGTCCGAACGGTACGAACGGTAAGAACAATGGAAATAGTGCACAAACAGTTGTTGATTCTTCTTCTCAGTCAGGCGTTGCTCATAATAGCAGTAACGATAGCAATACCAACTTTAAAGAAGCTGACGATTTTCGTGAGCGCCTAGGTCACGACATCAAACCTGGACTCCATCCCCTCAAGCAAAAGTTTGTATTTTGGTACACTCGTCGAACTCCTGGCATTCGAACTCAAACGTCATACGAGGACAATATAAAGAAGATTGTAGATTTCAGTACGGTTGAAGGTTTTTGGGTAAGTTATTGCCACCTGGCCCGTCCTTCTTCTTTGCCAAGCCCAACAGATTTGCATCTTTTTAAGGATGGAATCCGCCCATTATGGGAGGACTCAGCTAACTGCAATGGTGGAAAGTGGATAATACGATTCAAAAAGGTTGTCTCAGGTCGCTTCTGGGAGGATCTGGTTCTTGCTTTAGTCGGTGACCAGCTTGATTATGGAGACAACATATGTGGTGCCGTGCTAAGCATCCGTTTCAATGAAGACATTGTGAGTGTGTGGAACCGTAATGCCTCAGACCATCAGGCAGTAATGGCTTTGAGAGATTCAATCAAACGGCACTTAAAGCTTCCACACAGCTATGTGATGGAATACAAGCCCCATGATGCTTCTCTGCGTGACAACTCATCTTACAGGAACACATGGTTACGAGGCTAG 744 45.16 MELVGEKKESESPNGTNGKNNGNSAQTVVDSSSQSGVAHNSSNDSNTNFKEADDFRERLGHDIKPGLHPLKQKFVFWYTRRTPGIRTQTSYEDNIKKIVDFSTVEGFWVSYCHLARPSSLPSPTDLHLFKDGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDIVSVWNRNASDHQAVMALRDSIKRHLKLPHSYVMEYKPHDASLRDNSSYRNTWLRG 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 2988873 2994669 - Conep19aG0037300.1 Cone19ag0360 458797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0360 247 MobiDBLite consensus disorder prediction 14 48 - -
Cone19ag0360 247 MobiDBLite consensus disorder prediction 1 49 - -
Cone19ag0360 247 Pfam Eukaryotic initiation factor 4E 69 227 IPR001040 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0006413(InterPro)
Cone19ag0360 247 Gene3D RNA Cap, Translation Initiation Factor Eif4e 31 241 IPR023398 -
Cone19ag0360 247 FunFam Eukaryotic translation initiation factor NCBP 39 240 - -
Cone19ag0360 247 SUPERFAMILY eIF4e-like 44 243 IPR023398 -
Cone19ag0360 247 ProSitePatterns Eukaryotic initiation factor 4E signature. 125 148 IPR019770 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0006413(InterPro)
Cone19ag0360 247 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 35 235 IPR001040 GO:0000340(PANTHER)|GO:0003723(InterPro)|GO:0003743(PANTHER)|GO:0003743(InterPro)|GO:0006413(InterPro)|GO:0016281(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0453 Cone-Chr13:4772963 Cone19ag0360 Cone-Chr19:2988873 3.27E-173 dispersed
Cone19ag0360 Cone-Chr19:2988873 Cone9ag0931 Cone-Chr9:4570020 2.19E-35 dispersed
Cone19ag0360 Cone-Chr19:2988873 Cone6ag0928 Cone-Chr6:4749111 5.18E-36 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0360 K03259 - csv:101204290 412.535