Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0371 ATGGCAAGGAAGAAGAGAACTGAAATTCCTGCTGGTGGTGAGAGCTCCGATTCTCGAGAAGCCATTGGGGGTGGTGGTCAAGGTGGTTTGCAAACCCCTGATGGCGGTGCACCTCCACAGCAACAGGGAGGGAGAGGATACCAAGGTGGAAGAGGTTGGGGTCCCCAAGGGGGTCGTGGAGGTAATGGAGGTGGCCGTAGTTATGGAACTCAACAACAGCAGTATGGAGGGAACCCTGAATATCAGGGAAGGGGAAGGGGAGGGCCACCTCAACAAGGTGACCGTGGCGGCTACGAAGGAGGCCATAGCGGCCATGAAGGAGGCAGTGGCGGCGGTGGTTATGGAGGCAATGGCGGTGGTCGTGGCCGAGGACCTCCTGGTGGCCAACCTAGACCACAAGTACCCGAGCTGCACCAAGCAACCCCGGTTCCATGCCAAGGTGGGGTGAATCATCCTATCTCATCCGAGGCAAGTTCCTCCCGGCAACCTGAACTTGTACAGGTGGAGCAACAGCTTGAACAGCTAGATGTTCAGGAAACTTCTCCTAGCTTGTCAATTCAACCTGTTCCACAATCAAGTAAATCAATGAGATTTCCCCTCCGTCCAGGAAAGGGTAGCTATGGAACAAGATGTCTAGTAAAAGCTAACCACTTCTTTGCTGAATTACCAGACAAAGATCTTCACCAGTATGATGTAACTATCACTCCGGAGGTCACCACCAGAGGTCTGAACCGTGCTGTAATGAAAGAGTTGGTGAAACTCTACAGGGTGTCTCATCTTGGAGGCAGGCTTCCAGTCTATGATGGACGAAAGAGTCTGTATACTGCCGGTCCTCTTCCTTTCCCTTCTAAGGAGTTCAGAATCACTCTCACTGATGAAGATGATGGAACAGGAGGGCATAGGAGGGAACGAGAATTCAAAGTTGTGATCAAATTTGCTGCACGAGCAGATCTCCACCACTTGGGACTCTTTTTACAGGGGAGAGAGGCTGATGCACCTCAAGAAGCTCTTCAGGTTCTCGACATTGTTTTACGCGAGCTGCCAACATCTAAATTAGTTCCAGTGGGCCGATCATTCTACTCCAAGGATCTTGGAAAACGTCAATCACTCGGTGAGGGGTTGGAAAGCTGGCGTGGATTTTACCAGAGCATTCGCCCAACTCAAATGGGGCTGTCACTGAACATTGATATGTCATCCACAGCCTTCATTGAGGCGTTGCCAGTCATAGAATTTGTAACCCAGCTTCTCAATCGTGATGTTTCAAACAGACCATTGTCTGATTCTGATCGTGTAAAGATAAAGAAAGCGCTGCGAGGAGTCAAGGTTGAAGTTACTCACCGTGGGCACATGCGTAGAAAGTATAGGATATCTGGTTTAACATCACAGGCTACGCGTGAGCTTACTTTCCCAGTTGACGAGAGTGGTACAATGAAATCTGTGGTTGAATACTTTTACGAAACATATGGGTATGTGATTCAACATTCCCAATGGCCTTGTCTACAAGTGGGAAATCAGCAGAGACCAAATTACTTACCTATGGAGGTTTGCAAAATTGTTGAGGGTCAAAGGTACTCGAAGCGGCTGAATGAAAGGCAGATAACTGCTTTGTTGAAGGTCACATGCCAGCGTCCTAAAGATAGGGAGAATGACATTGTGCAGACAGTTAAACATAATGATTATGGAAAGGATGAATATGCAAAGGAATTTGGAATCAAAATTAGTGACAGGCTTGCTTCTGTTGAGGCTCGCATTCTTCCTCCACCATGGTTGAAATATCATGACGCGGGTAGGGAAAGAGATTGCTTGCCGCAAGTTGGACAATGGAATATGATGAACAAGAAAATGGTTAATGGAGGTACAGTTAACAGTTGGATTTGTATCAACTTCTCGCGAATTGTGCAAGACAGTGTTGCGCGTGGTTTTTGTAAAGAGCTTGCTCAAATGTGTTTTGTATCTGGAATGGCATTTAATCCGGAACCAGTACTGCCCCCTCATAGTAGTCATCCCGATCATGTGGAGAAGGCTCTCAAAACTCAGTACCATGATGCAACAGCCAGACTCAAGGGGAAGGAACTCGACTTGCTAATTGTTATTTTGCCAGATAATAATGGCTCTCTTTATGGTGATTTAAAACGCATATGTGAGACAGACTTGGGACTTGTTTCTCAGTGCTGTTTGACAAAACATGTGTTCAAAATGAGCAAACAGTATTTGGCTAACGTGGCGTTAAAGATTAATGTGAAAGTTGGTGGAAGGAACACAGTTCTTGTTGATGCAATATCAAGACGTATACCATTAGTTAGTGACAGACCTACCATTATATTTGGTGCTGATGTGACCCATCCTCACCCAGGCGAGGATTCAAGTCCTTCAATTGCAGCTGTTGTGGCCTCACAAGATTGGCCAGAAGTCACTAAGTATGCAGGTTTGGTTTGCGCCCAAGCCCACAGACAAGAACTTATCCAGGACCTGTTCAAAACATGGCAAGATCCTGTAAGAGGGACTGTTTCTGGTGGAATGATCAAGGAATTACTCATATCATTTCGTAGAGCAACTGGGCAGAAACCAGAACGAATCATCTTTTACAGGGATGGTGTGAGTGAGGGACAATTCTATCAAGTTTTGTTGTATGAGCTTGATGCCATTCGCAGGGCATGTGCCTCTTTGGAGCCAAACTATCAGCCTCCAGTCACTTTTGTTGTGGTACAAAAGCGTCATCACACAAGACTGTTTGCTAACAACCATAATGATCGCAATGCAACTGACAGGAGTGGGAATATATTACCAGGTACAGTTGTAGACTCCAAGATCTGTCATCCGACAGAATTTGATTTCTATCTTTGCAGCCATGCTGGAATTCAGGGCACAAGCCGTCCTGCTCATTACCATGTTTTGTGGGATGAGAACAAGTTCACAGCAGACGGTCTTCAGACCCTTACAAACAACCTTTGCTATACATATGCTCGATGTACACGATCTGTTTCTATAGTGCCCCCTGCCTATTATGCACATCTTGCTGCATTCCGGGCTCGTTTTTATATGGAACCTGAGACCTCTGACAGTGGGTCCATGGCTAGTGGTTTTGCGGCAGGACGTGGAGGCATGGGTGGAGCTGGTGTTCAACGTGGTGGCACACGACCAGCAGGTGGAAATGCTGCTGTTAGACCCTTGCCTGCTCTGAAAGAGAACGTGAAGAAAGTTATGTTCTACTGTTAG 3216 46.77 MARKKRTEIPAGGESSDSREAIGGGGQGGLQTPDGGAPPQQQGGRGYQGGRGWGPQGGRGGNGGGRSYGTQQQQYGGNPEYQGRGRGGPPQQGDRGGYEGGHSGHEGGSGGGGYGGNGGGRGRGPPGGQPRPQVPELHQATPVPCQGGVNHPISSEASSSRQPELVQVEQQLEQLDVQETSPSLSIQPVPQSSKSMRFPLRPGKGSYGTRCLVKANHFFAELPDKDLHQYDVTITPEVTTRGLNRAVMKELVKLYRVSHLGGRLPVYDGRKSLYTAGPLPFPSKEFRITLTDEDDGTGGHRREREFKVVIKFAARADLHHLGLFLQGREADAPQEALQVLDIVLRELPTSKLVPVGRSFYSKDLGKRQSLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEALPVIEFVTQLLNRDVSNRPLSDSDRVKIKKALRGVKVEVTHRGHMRRKYRISGLTSQATRELTFPVDESGTMKSVVEYFYETYGYVIQHSQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPKDRENDIVQTVKHNDYGKDEYAKEFGIKISDRLASVEARILPPPWLKYHDAGRERDCLPQVGQWNMMNKKMVNGGTVNSWICINFSRIVQDSVARGFCKELAQMCFVSGMAFNPEPVLPPHSSHPDHVEKALKTQYHDATARLKGKELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDAISRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLFKTWQDPVRGTVSGGMIKELLISFRRATGQKPERIIFYRDGVSEGQFYQVLLYELDAIRRACASLEPNYQPPVTFVVVQKRHHTRLFANNHNDRNATDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMASGFAAGRGGMGGAGVQRGGTRPAGGNAAVRPLPALKENVKKVMFYC 1071
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3158324 3167167 + Conep19aG0038400.1 Cone19ag0371 458808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0371 1071 Gene3D - 763 1071 IPR036397 GO:0003676(InterPro)
Cone19ag0371 1071 Pfam N-terminal domain of argonaute 210 344 IPR032474 -
Cone19ag0371 1071 FunFam Argonaute 10 584 757 - -
Cone19ag0371 1071 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 202 1021 - GO:0003723(PANTHER)|GO:0004521(PANTHER)|GO:0005737(PANTHER)|GO:0035194(PANTHER)
Cone19ag0371 1071 Pfam Glycine-rich region of argonaut 76 190 IPR024357 -
Cone19ag0371 1071 CDD PAZ_argonaute_like 405 519 - -
Cone19ag0371 1071 Gene3D paz domain 399 524 - -
Cone19ag0371 1071 Pfam Mid domain of argonaute 603 678 IPR032473 -
Cone19ag0371 1071 SMART Piwi_a_2 694 1015 IPR003165 GO:0003676(InterPro)
Cone19ag0371 1071 MobiDBLite consensus disorder prediction 65 79 - -
Cone19ag0371 1071 SUPERFAMILY Ribonuclease H-like 680 1015 IPR012337 -
Cone19ag0371 1071 ProSiteProfiles Piwi domain profile. 694 1015 IPR003165 GO:0003676(InterPro)
Cone19ag0371 1071 SMART PAZ_2_a_3 410 542 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone19ag0371 1071 MobiDBLite consensus disorder prediction 151 194 - -
Cone19ag0371 1071 FunFam protein argonaute 10-like 763 1071 - -
Cone19ag0371 1071 Pfam Argonaute linker 2 domain 546 592 IPR032472 -
Cone19ag0371 1071 FunFam Protein argonaute-2 399 525 - -
Cone19ag0371 1071 Pfam Argonaute linker 1 domain 354 404 IPR014811 -
Cone19ag0371 1071 SMART DUF1785_2 353 405 IPR014811 -
Cone19ag0371 1071 SUPERFAMILY PAZ domain 212 551 IPR036085 GO:0005515(InterPro)
Cone19ag0371 1071 ProSiteProfiles PAZ domain profile. 407 520 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone19ag0371 1071 CDD Piwi_ago-like 564 1014 IPR045246 -
Cone19ag0371 1071 Pfam PAZ domain 410 536 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cone19ag0371 1071 Pfam Piwi domain 695 1014 IPR003165 GO:0003676(InterPro)
Cone19ag0371 1071 Gene3D - 584 757 - -
Cone19ag0371 1071 MobiDBLite consensus disorder prediction 1 200 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0931 Cone-Chr13:8080186 Cone19ag0371 Cone-Chr19:3158324 1.61E-193 dispersed
Cone18ag0900 Cone-Chr18:6382469 Cone19ag0371 Cone-Chr19:3158324 2.72E-231 dispersed
Cone19ag0371 Cone-Chr19:3158324 Cone2ag0674 Cone-Chr2:32001583 0 dispersed
Cone13ag0363 Cone-Chr13:3287540 Cone19ag0371 Cone-Chr19:3158324 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0371 K11593 - cit:102616587 1657.5