Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0400 ATGGTCAGTAGGCAGCAACTCTTGCTCACTCTCTTCATCTTGCCACTCACCATCCATGTTTCCTCCACCACCACTCACCAGCACCTCCACCGCCACCGCCGCCGTCTTCTCCACCAACCTTTGTTTCCTTTGGATTCTCCTCCTCCGTCTCATCCTCCGACACTCTCTCCACAAACACAGCCCCAAAAACAACAACCTAAACTCCCATTCTCTTCCGCTTCCTCGTCGTCCACTCCACAGAAACCATTCTTCCCATTTTATCACTCCGCACCTACTCCCCCTGCTCCCACCGCTATCGCCACCTTTCCGGCCAACATTTCTTCCCTTCTTCTCCCGCAAACCACCTCTAAACCTCACCACCACGTCCTCGGCATCTCTCTCGCCGTTTCTTTCCTTTCCGTTGCTCTAATCGCTGGTCTCGTCGGCTTCCTATACTACCGCAAAAACCCTAAATTATCTCCCATCTCTAAACCTACCGGTCCAGACTGTCTCCGCCTCTATCCTCCCAACATCGCAACATCCGACGGCAGCGGAGGTCACAAGCCGCCACCTCACACCACCTCGAACACCAGCGCAGAGTTTCTCTACTTTGGCACGCTAGCAAATTCCAGAGAAATCGGTGAAGAAGAGACAGCAGGGAATTCAAGCAATGCTGCTCTTTCCGCCGAGATATCCACCTCCTCACCTCACCAGAAGATCGGCTCACCGGAGCTCAAACCTCTACCACCTCTTCCTCGCCACAATTTCGTACAAGATTACAGAAACGTCAAACAAGAGGAAGACGATGAAGAAGAAGAAGAAGAATTTTTCTCGCCAAGAGGATCTTCAGGCCGGCAAGAAAACTTGATCCACAACGGATCGAGCTCATGTAGAATGTACCAGAGCGTAGAAGCTGATCATTTTGGAAACCGAAGCTTCAATTCGAGAAGTCCGAGTCCTTCATATCGACTACGCACAAATTCCGTTTCTCCATCGATAACCGTTTCCAACAGTCCATCTCCACCGTCCATTCTAAGTCCGGTCAGCTTGAAATCAAAATCACCAGACTCTCTAATCAGTTTCCCCCTTCCACTACGCCCTCTTCCACCTCGTCCAGTAATACCATCATCTCCACCGTTATCTTCAACCAATCATTCTCCGTCCAGAAACTCTGACGTCTCAGACCTGAAAACAGAATCTCCCACCGTTCCTAATCATTTCGTTCCATTAAGAATACCTCCTCCTCCTCCGCCTCCGCCTCCGCCTCCGCCTCCAGCAGGGTACTGGGAAGTTCCGGCTCAAGTTCCGGCTCATTCCAGTTCTGGGCCACCGGTCTTAACAAGGCCGGTTCTGTTTAAATCGGCCGAGCAATTACCTAGCAATGTAATGATAGAGAAGAATGAGGAAACCCCAAAACCAAAATTGAAGCCGTTGCATTGGGATAAAGTTAGGGCAAGTTCGGACCGGGCTATGGTGTGGGACCAGATCAAATCAAGCTCTTTTCAGTTAGATGAGGAGATGATTGAGTCACTCTTCACGGCGAATAATTGGAATTCGTCGATGAAAGAAAACGGTGGTAGAAGACAGATTCTTCCTTTGCCGATTCAAGAAAACCGTGTTCTTGATCCGAAGAAATCCCAGAACATTGCTATATTGTTAAGAGCGTTGAACGTGACGATTGATGAAGTGTGTGAAGCTCTTCTGGAAGGCAATCCGGATACAATGGGTACCGAACTTCTCGAAAGCTTATTAAAGATGGCACCTACTAAAGAGGAAGAATGGAAACTAAAAGAATTCAAGGACGAATCACCATTCAAGCTTGGCCCAGCTGAGAAATTCCTCAAGGCTGTTCTTGATGTACCTTTTGCATTCAAAAGGATCGATGCTATGCTCTACATTGTCAATTTTGATTCAGAAATTGAGTACCTCAAGAGATCGTTTGAAACTCTACAAATGGCTTGTGATGAACTGAAGAACAGCAGAATGTTCCTGAAACTTCTAGAAGCAGTACTCAAAGCCGGAAACCGCATGAACGTGGGGACCAATCGAGGAGATGCTCATGCCTTTAAGCTTGACACTCTTCTCAAGCTTGTAGACGTAAAGGGCACGGATGGAAAAACTACCCTTCTCCATTTTGTCGTGCAAGAAATCATCCGAGTAGAAGGTTCTAAACTCTCCAACTCCAATAATCAGATCTCAACCGGAGAAACTACTTCTTTAACAGATGATGTCGAGTTTAGAAAGCTTGGCCTCCAAGTCGTCTCAAGTCTAAGTGGAGAGCTATTAAATGTCAAAAAAGCTGCTGCTATGGACTCCGATGTGCTTAGCTCTGAAGCTGGGAAACTTGCTGATGGAATAAAGAAGATCTATGAGGTTGTAAAAATGAATGTAGAGATTGGATCGAAAGAGAGTAAGTTGAAATTCTCGGAGAATATGAATGCGTTTTTGAAGAGGGGGGAGGAAGATATTGTGAGGATACAAGCTCAAGAGAGTGTTGCTCTTTCTATGGTGAAGGAGATAACCGAGTATTTTCACGGAAACTCTGCCAAGGAAGAAGCTCATCCTTTCCGGATTTTCATGGTGGTGAGGGATTTTCTTTCGGTTCTTGATCAGGTGTGTAAGGAAGTTGGGAGGATTAATGAAAGGAGTATGGCTGGTTCGACTAAACAGTTTTCTGTGCTGCCGAGTAGTAACCCAGTTCTTCAACCGGTTTTCCCCGGATTTATGACGGGAAAGCCAAATTATGATTCCTCAGATGATGAAACGTCATCTCTTTCATCTCAGTGA 2766 46.75 MVSRQQLLLTLFILPLTIHVSSTTTHQHLHRHRRRLLHQPLFPLDSPPPSHPPTLSPQTQPQKQQPKLPFSSASSSSTPQKPFFPFYHSAPTPPAPTAIATFPANISSLLLPQTTSKPHHHVLGISLAVSFLSVALIAGLVGFLYYRKNPKLSPISKPTGPDCLRLYPPNIATSDGSGGHKPPPHTTSNTSAEFLYFGTLANSREIGEEETAGNSSNAALSAEISTSSPHQKIGSPELKPLPPLPRHNFVQDYRNVKQEEDDEEEEEEFFSPRGSSGRQENLIHNGSSSCRMYQSVEADHFGNRSFNSRSPSPSYRLRTNSVSPSITVSNSPSPPSILSPVSLKSKSPDSLISFPLPLRPLPPRPVIPSSPPLSSTNHSPSRNSDVSDLKTESPTVPNHFVPLRIPPPPPPPPPPPPPAGYWEVPAQVPAHSSSGPPVLTRPVLFKSAEQLPSNVMIEKNEETPKPKLKPLHWDKVRASSDRAMVWDQIKSSSFQLDEEMIESLFTANNWNSSMKENGGRRQILPLPIQENRVLDPKKSQNIAILLRALNVTIDEVCEALLEGNPDTMGTELLESLLKMAPTKEEEWKLKEFKDESPFKLGPAEKFLKAVLDVPFAFKRIDAMLYIVNFDSEIEYLKRSFETLQMACDELKNSRMFLKLLEAVLKAGNRMNVGTNRGDAHAFKLDTLLKLVDVKGTDGKTTLLHFVVQEIIRVEGSKLSNSNNQISTGETTSLTDDVEFRKLGLQVVSSLSGELLNVKKAAAMDSDVLSSEAGKLADGIKKIYEVVKMNVEIGSKESKLKFSENMNAFLKRGEEDIVRIQAQESVALSMVKEITEYFHGNSAKEEAHPFRIFMVVRDFLSVLDQVCKEVGRINERSMAGSTKQFSVLPSSNPVLQPVFPGFMTGKPNYDSSDDETSSLSSQ 921
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3372812 3376998 - Conep19aG0041300.1 Cone19ag0400 458837
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0400 921 SMART it6_source 458 877 IPR015425 -
Cone19ag0400 921 MobiDBLite consensus disorder prediction 207 284 - -
Cone19ag0400 921 Pfam Formin Homology 2 Domain 459 862 IPR015425 -
Cone19ag0400 921 MobiDBLite consensus disorder prediction 355 370 - -
Cone19ag0400 921 PANTHER FORMIN-RELATED 30 914 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
Cone19ag0400 921 MobiDBLite consensus disorder prediction 40 87 - -
Cone19ag0400 921 MobiDBLite consensus disorder prediction 400 421 - -
Cone19ag0400 921 Gene3D Formin, FH2 domain 452 872 IPR042201 -
Cone19ag0400 921 MobiDBLite consensus disorder prediction 42 56 - -
Cone19ag0400 921 SUPERFAMILY Formin homology 2 domain (FH2 domain) 408 875 - -
Cone19ag0400 921 MobiDBLite consensus disorder prediction 371 394 - -
Cone19ag0400 921 MobiDBLite consensus disorder prediction 303 349 - -
Cone19ag0400 921 MobiDBLite consensus disorder prediction 57 83 - -
Cone19ag0400 921 MobiDBLite consensus disorder prediction 208 233 - -
Cone19ag0400 921 MobiDBLite consensus disorder prediction 303 421 - -
Cone19ag0400 921 ProSiteProfiles Formin homology-2 (FH2) domain profile. 458 888 IPR015425 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1403 Cone-Chr12:10298466 Cone19ag0400 Cone-Chr19:3372812 2.87E-110 dispersed
Cone19ag0400 Cone-Chr19:3372812 Cone7ag0764 Cone-Chr7:4752804 7.19E-193 dispersed
Cone13ag0382 Cone-Chr13:3487304 Cone19ag0400 Cone-Chr19:3372812 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0400 K28090 - mdm:103451653 889.026