Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0415 ATGGAAGCTTCTACATTGAGGAAGAAGATTCAGAAGAAGTCAAAGATCAGAGGATACAGCCTCAAAATCGATGCTCTCAGTGACATCGTTTCCTTCGCTCGCCGCTTCCCTGGCAATGAAGAAGACGCCATAGATCTCCTTCTCGACAAGCTCGACGACCAGGAGTCTCTGAAATCCTTGATTTTAGACAAAGAAGCGGTGCAGCGAATTGTCAGCCTTCTGCTCAGAGCCGAAGCAGCTGTTGAAGTAAGCTGTGAGACCATTGATAGTGCATCCGCACTTCGTGTCATCGATGCCTTCTTAGTTCCAAAATTGCGCTACGATCCTATTAAGAAGCTTTGTAAACAGCATACAGGAAACCTCCCAATTCACGGTGATGCTTCTGCTAAAGCCGATTTGTACAGAGATAGGCTTCTCTTGCTGACCCACAGGCTCTCTCGTGATCAGAATTTCTCCAGACCTGCATTTAGCAGCCGACTGTCGCAATTCGGAAGCTGTGAGATTTCACCTATTCAGTCTCTGGTTGGGAAAGTAGGGAGAAAATGGGTCATGGGCGTGATATCCCAGTTGGAGGATGGCCACTTTTACTTGGAAGACCTTACTGCTTCAGTGGAAATCAATTTATCTAATGCTAAGATAACTACAGGTTTTTTCACGGAGAACACCATAGTAGTAGCAGAAGGAGAAATGCTTCTAGAAGGCATTTTTCAGGTTTTTACTTGTGGATTTCCTCCACTAGAAGACAGAGAAAAGTCGCTCAAATTCCTTGCTGGACTTGACTATTTTGGAGACATTTGGCTAGACAATGAGGAGGTCATGGGAAAGCTGGAGACCATTCTCAATGGTTTTGAGAATGTTGAAGTGGTTCCTTCCTTGTTTGTTTTCATGGGAAATTTTTCTTCTCAACCATGTAATCTTTCCTTCAATTCTTATGCAAATCTCAGGCATCAATTTGGGAAACTAGGTAAAATGATAGCTGACCATCCTCGACTAAAAGAGCATAGTTGGTTTCTATTTATACCAGGTCCAGATGATGCAGGTCCATCAACTGCTCTACCATACTGTGCTTTCCGAAAGTATTTAATTGAGGAACTTCAGGTTTATGTCCCGAATGCCATCTTTTCAAGTAACCCTTGTAGGATCAAATTTTATACTCAAGAAATTGTATTTTTTCGCCAGGATCTGCTTTATAGGATGAATCGTTCGTGTCTCATTCGCCCATCCACAGAAGAAACTACTGATCCTTTTGAGCATCTTGTTGCCACCATAACCCATGAAAGTCATCTCTGCCCCCTCCCTCTTGATGTACAACCGATTATCTGGAATTATGATCACTCTCTCCATCTTTATCCAACTCCTCATGCGATAGTTTTAGCGGATAGAAGTAGCCAGCAAGCATTCAAATACACAGGAATCACTTGCTTTAATCCCGGTTCATTCTCAAACGACAGTACTTTTGTGGCATATCGTCCTTGTACTCAAGAAGTTGAACTATCAGCCTTGTAA 1506 42.83 MEASTLRKKIQKKSKIRGYSLKIDALSDIVSFARRFPGNEEDAIDLLLDKLDDQESLKSLILDKEAVQRIVSLLLRAEAAVEVSCETIDSASALRVIDAFLVPKLRYDPIKKLCKQHTGNLPIHGDASAKADLYRDRLLLLTHRLSRDQNFSRPAFSSRLSQFGSCEISPIQSLVGKVGRKWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFTENTIVVAEGEMLLEGIFQVFTCGFPPLEDREKSLKFLAGLDYFGDIWLDNEEVMGKLETILNGFENVEVVPSLFVFMGNFSSQPCNLSFNSYANLRHQFGKLGKMIADHPRLKEHSWFLFIPGPDDAGPSTALPYCAFRKYLIEELQVYVPNAIFSSNPCRIKFYTQEIVFFRQDLLYRMNRSCLIRPSTEETTDPFEHLVATITHESHLCPLPLDVQPIIWNYDHSLHLYPTPHAIVLADRSSQQAFKYTGITCFNPGSFSNDSTFVAYRPCTQEVELSAL 501
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3447681 3452193 + Conep19aG0042800.1 Cone19ag0415 458852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0415 501 Gene3D - 1 73 - -
Cone19ag0415 501 PIRSF DNA_pol_epsilon_2 1 264 IPR016266 GO:0003677(InterPro)|GO:0006261(InterPro)|GO:0008622(InterPro)
Cone19ag0415 501 PIRSF DNA_pol_epsilon_2 261 501 IPR016266 GO:0003677(InterPro)|GO:0006261(InterPro)|GO:0008622(InterPro)
Cone19ag0415 501 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 262 501 IPR016266 GO:0003677(InterPro)|GO:0006261(PANTHER)|GO:0006261(InterPro)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0042276(PANTHER)
Cone19ag0415 501 Pfam DNA polymerase alpha/epsilon subunit B 264 464 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0415 K02325 - cit:102610782 766.148