Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0420 ATGGGAGGCTCCGGAGAGATCATTCTCAAAAACTCTGCCCTTCTTAATTACATTTTAGAAACAAGCGCGTATCCTCAAGAACACGAACAACTGAAGGAACTTAGGGCAGCAACCGTCCAGAAATACAAGTATTGGAGTTTGATGAATGTACCTGTTGATGAAACACAGCTTCTCTCGATGCTTCTCAAGCTCATGAATGCCAAGAACACTATTGAAATCGGCGTCTTTACCGGTTATTCTCTTCTTACCACTGCACTTGCTCTACCATCTGATGGCAAGATCATGGCGATAGATCCCGACGAGGAAGCCTTCAAAACCGGGTTACCATTTTTCAAGAAGGCTGGAGTTGATCATAAGATCAATTTCATTGCATCTGATGCCTTCCTAGTCCTGAAAGACCTAATAGAAGATGGATCAAAAGAGGAAGAAGATTTAGGAAGGTTTGATTTTGCATTCATGGATGCTAATAAAGATGAGTACATGAAATATCACGAGCTGCTCGTAAAATTGGTTAAAGTAGGAGGAATTATTGCATATGATAATACCTTATGGTTTGGATCTGTGTCACTTTCGGACGGAGATGAAATGGAAGAATTTTTGAAGAAAGATAGAAAAGCTCTGAGGAATTTCAACTCATTCTTAGCAAATGATTCCCGGATTGAGTCTGCTCTCATTTCCATAGGTGATGGTCTCACCCTTTGTAGGCGTCTCAAATAG 717 40.73 MGGSGEIILKNSALLNYILETSAYPQEHEQLKELRAATVQKYKYWSLMNVPVDETQLLSMLLKLMNAKNTIEIGVFTGYSLLTTALALPSDGKIMAIDPDEEAFKTGLPFFKKAGVDHKINFIASDAFLVLKDLIEDGSKEEEDLGRFDFAFMDANKDEYMKYHELLVKLVKVGGIIAYDNTLWFGSVSLSDGDEMEEFLKKDRKALRNFNSFLANDSRIESALISIGDGLTLCRRLK 238
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3480860 3482233 - Conep19aG0043400.1 Cone19ag0420 458857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0420 238 PANTHER O-METHYLTRANSFERASE-RELATED 8 237 IPR050362 GO:0008757(PANTHER)
Cone19ag0420 238 Pfam O-methyltransferase 20 237 IPR002935 GO:0008171(InterPro)
Cone19ag0420 238 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 7 237 IPR002935 GO:0008171(InterPro)
Cone19ag0420 238 Gene3D Vaccinia Virus protein VP39 4 238 IPR029063 -
Cone19ag0420 238 CDD AdoMet_MTases 71 179 - -
Cone19ag0420 238 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 236 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0996 Cone-Chr14:8251496 Cone19ag0420 Cone-Chr19:3480860 1.61E-44 transposed
Cone3ag1185 Cone-Chr3:30530874 Cone19ag0420 Cone-Chr19:3480860 7.14E-77 transposed
Cone7ag1143 Cone-Chr7:8595412 Cone19ag0420 Cone-Chr19:3480860 7.06E-73 transposed
Cone8ag1124 Cone-Chr8:9929186 Cone19ag0420 Cone-Chr19:3480860 4.39E-76 transposed
Cone13ag0462 Cone-Chr13:5048778 Cone19ag0420 Cone-Chr19:3480860 2.09E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0420 K00588 - vvi:100250567 319.316