Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag0426 | ATGGCTACGTACTTTCATGGCAACACGGAAATCCAAGCACCCGATGGCTTGCAAACCCTCCTGCTCATGAACCCAACAGCCTACGTCCAATACTCCGACACCCCGCCACCCCCTCCGCCGCCGACATCAGCCAACCACTTCGTATTCCTCAACTCCGCCGCCAACTCTCTCTCCACCCACAACCACCTCCCCCATCACCATGCGCCAATTTCATCCCACACACAACAATTCGTTGGCATCCCACTGCCCACAAGCGCTGCTCCAAACCACCATGACTTACCAAACATAACCTCCATGCATGGTTTCATCAATCCAGCTCACCTCCAATACAATCTTTGGAACCCAAACATAAATAATGAACCATCCACGGTGGCGCGTGACTCCCCACGCTCCCAACAAGGTTTATCTCTGAGTCTTTCCTCCTCTCAACACCCTCTTCCTCCTCTGGGTTACGGCTCCATCCGCGACCAACGGAAAGGCTCATTAACACAATCGGCCCAACAAGCGATTTCAAACGATCACGATATGCGGAATATTTCGGGCGGGTCGTCCTCTTCGGCATCAGGTATAACCAACGGTGTTTCGGGTTTACAAGGCGTGCTGTTGAGTACAAAGTACTTGAAAGCGGCTCAAGACCTTCTTGACGAGGTTGTCAATGTTGGAAATGATCACAATGGGATCAAGAAGGGTAGTAATATCGGACAGCAGAGTAAGGAGGTCGGAGAGGGATCTGGCCGGGTGGCTGGAGATGGGTCTGCCGGAATGCTAGCAGACGGTAAGAACAGCTCCGAGCTTTCCACCGCTGAGCGCCAAGAAATTCAAATGAAGAAGGCAAAGCTTATTGGCATGCTTGATGAGGTGGAGCAAAGGTACAGGCAATACCATCACCAAATGCATATCATAATATCATCATTTGAGCAAGCGGCCGGGATCGGTTCGGCGAAAACATACACGGCTCTAGCGCTCGAGACGATCTCAAGGCAATTCAGGTGCTTGAAAGACACTATTACTAGCCAAATCAAAACTGCAAACAAAACCTTAGGAGAAGAAGATAATGGTCTTAGCAATGGAGGAGGAAAGATTGAAGGGTCGAGATTGAAATATGTCGATCATCAGCTTCGTCAGCAGAGAGCTCTTCAGCAGTTGGGAATGATCCAGCATAATGCTTGGAGACCCCAAAGAGGATTACCTGAAAGATCTGTTTCGGTTCTCCGTGCTTGGCTTTTCGAACACTTTCTTCACCCATATCCAAAAGATTCAGACAAGACCATGCTTGCAAAACAAACAGGGCTTACTAGAAGCCAGGTTTCGAATTGGTTTATAAATGCAAGAGTTAGGCTATGGAAACCAATGGTGGAAGAAATGTACTTGGAAGAAATCAAGGAGCAAGAGCAGAGTAATACTAATATTGGTGGAGTAGTGAAGAGCAACAATGAAGGTTCTCCTTCAAAATCCATCACTTCACAAGGCAAAAGTACTTCTACTCCTCCAACTCATGATCATCAAAACCAACTCTCAAGCTTCAACTCCAAGCAAGAGAATCCCCCCGAAATCTTAACTCCACCGAAAAATCTTCAGAACCAATCTGGATTTTCTCTCATTGGGTCTTCGGAACTAGAAGGGATCACTCAATCGAGCCCGAAGAAGCAAAGAAACTCGGATCATGTTGAAGCTACAAATGAGCATAACATGTCAATGAAGTTCAATGAAAATCATAGACAAAGTAGTAGAGATGAGTTTTCCTTTATGGGAGGCCAAACCAACTTTATTGGAGGTTTTGGGCAATACCCAATTGGAGAGATAGACACTAGGTTCAATGGAGATGATCAATTCGCGCCCCGGTTTACGGGCAATAACGGCGTTTCGCTCACTCTTGGACTTCCTCACTGTGAAAACCTGTCATTATCCGAGGCGCACCAGGGCTTTCTCCAGAACCAAAGCATTCGGATTAATGGAACTAGAAGAGTAGTCGACAACATTGGGGAACAAGACGAGTTTAGTGCTATGAATGGTACTAATGGATCATCTGTGTCCCATTCTTCTACTGCATTTGAGAACATCAATATTCAGAACCGAAAGCGATTCGCCGCGCAATTGCTGCATGACTTTGTGGCTTGA | 2118 | 46.88 | MATYFHGNTEIQAPDGLQTLLLMNPTAYVQYSDTPPPPPPPTSANHFVFLNSAANSLSTHNHLPHHHAPISSHTQQFVGIPLPTSAAPNHHDLPNITSMHGFINPAHLQYNLWNPNINNEPSTVARDSPRSQQGLSLSLSSSQHPLPPLGYGSIRDQRKGSLTQSAQQAISNDHDMRNISGGSSSSASGITNGVSGLQGVLLSTKYLKAAQDLLDEVVNVGNDHNGIKKGSNIGQQSKEVGEGSGRVAGDGSAGMLADGKNSSELSTAERQEIQMKKAKLIGMLDEVEQRYRQYHHQMHIIISSFEQAAGIGSAKTYTALALETISRQFRCLKDTITSQIKTANKTLGEEDNGLSNGGGKIEGSRLKYVDHQLRQQRALQQLGMIQHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKTMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKEQEQSNTNIGGVVKSNNEGSPSKSITSQGKSTSTPPTHDHQNQLSSFNSKQENPPEILTPPKNLQNQSGFSLIGSSELEGITQSSPKKQRNSDHVEATNEHNMSMKFNENHRQSSRDEFSFMGGQTNFIGGFGQYPIGEIDTRFNGDDQFAPRFTGNNGVSLTLGLPHCENLSLSEAHQGFLQNQSIRINGTRRVVDNIGEQDEFSAMNGTNGSSVSHSSTAFENINIQNRKRFAAQLLHDFVA | 705 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 3526526 | 3530915 | + | Conep19aG0044000.1 | Cone19ag0426 | 458863 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag0426 | 705 | FunFam | BEL1-like homeodomain protein 9 | 393 | 455 | - | - | |
Cone19ag0426 | 705 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 143 | 498 | IPR050224 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
Cone19ag0426 | 705 | MobiDBLite | consensus disorder prediction | 224 | 265 | - | - | |
Cone19ag0426 | 705 | Coils | Coil | 270 | 290 | - | - | |
Cone19ag0426 | 705 | SMART | HOX_1 | 390 | 454 | IPR001356 | GO:0003677(InterPro) | |
Cone19ag0426 | 705 | MobiDBLite | consensus disorder prediction | 463 | 567 | - | - | |
Cone19ag0426 | 705 | SUPERFAMILY | Homeodomain-like | 391 | 456 | IPR009057 | - | |
Cone19ag0426 | 705 | MobiDBLite | consensus disorder prediction | 225 | 239 | - | - | |
Cone19ag0426 | 705 | ProSiteProfiles | 'Homeobox' domain profile. | 387 | 450 | IPR001356 | GO:0003677(InterPro) | |
Cone19ag0426 | 705 | MobiDBLite | consensus disorder prediction | 121 | 147 | - | - | |
Cone19ag0426 | 705 | SMART | prehox3 | 195 | 338 | IPR006563 | - | |
Cone19ag0426 | 705 | MobiDBLite | consensus disorder prediction | 157 | 190 | - | - | |
Cone19ag0426 | 705 | Gene3D | - | 393 | 470 | - | - | |
Cone19ag0426 | 705 | MobiDBLite | consensus disorder prediction | 550 | 567 | - | - | |
Cone19ag0426 | 705 | Pfam | Associated with HOX | 200 | 337 | IPR006563 | - | |
Cone19ag0426 | 705 | CDD | homeodomain | 390 | 451 | IPR001356 | GO:0003677(InterPro) | |
Cone19ag0426 | 705 | MobiDBLite | consensus disorder prediction | 463 | 549 | - | - | |
Cone19ag0426 | 705 | MobiDBLite | consensus disorder prediction | 121 | 190 | - | - | |
Cone19ag0426 | 705 | Pfam | Homeobox KN domain | 407 | 446 | IPR008422 | GO:0003677(InterPro)|GO:0006355(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag1171 | Cone-Chr12:9284332 | Cone19ag0426 | Cone-Chr19:3526526 | 1.30E-96 | dispersed | |
Cone13ag1363 | Cone-Chr13:9972758 | Cone19ag0426 | Cone-Chr19:3526526 | 1.06E-64 | dispersed | |
Cone19ag0426 | Cone-Chr19:3526526 | Cone8ag1218 | Cone-Chr8:10314758 | 8.97E-89 | dispersed | |
Cone10ag0125 | Cone-Chr10:633452 | Cone19ag0426 | Cone-Chr19:3526526 | 7.06E-204 | wgd | |
Cone13ag0468 | Cone-Chr13:5121282 | Cone19ag0426 | Cone-Chr19:3526526 | 0 | wgd | |
Cone19ag0426 | Cone-Chr19:3526526 | Cone3ag0138 | Cone-Chr3:763964 | 5.51E-217 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45297 | PF01556 | DnaJ_C | 8.70E-32 | No_clan | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag0426 | - | - | - | 0.0 |