Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0456 ATGGCTTCACGATTCTGGACCCAGAGTGGTAGTGATACTGAGGATGAGGGGAGTGAGTATGATGAGGAAATTGAGAATGGAGAACAAGATGATACCACGGCCCAAGGCGAAGCTGCTGGAAGTAGATACCTTCTTGGAATTGATGCTGATAGTGATGATTCTGATGGCCAAAGGCGTGTTGTTAGATCGGCCAAAGACAAGCGCTTTGAGGAGATGTCTGCAACTGTTGACCAGATGAAAAATGCAATGAAGATTAATGACTGGGTCAGCTTGCAAGAGAGCTTTGATAAGATGAATAAGCAACTTGAGAAAGTCATGCGTGTGACTGAGTCTGAAAAGGTCCCTACTCTATATATCAAAGCACTGGTGATGTTGGAGGACTTCTTAAACCAGGCCTTGGCGAATAAGGAGGCAAAGAAGAAGATGAGTAGTAGTAATGCCAAGGCCTTGAATTCGATGAAACAGAAGCTCAAGAAGAACAATAAACAATATGAAGAGGCGATTAACAAGTTCCGGGAGAATCCCGAGAGTGAAGAGGAGAAGGAGGAGGATGAAGAATCGGAGGAGGAAGATGAGTCCGGTTCAGAAATTGAGGAGGATCCTTCGAAAATTGCAATGTCTGAGGATGAGGGAGAAGAAGAGGATGATCAAGATGATCGGGCTGGGGGTTGGGAGAAGATGATGAGCAAAAAAGATAAACTCATGGATAAGCAGTTTATGAAGGACCCAAGTGAGATCACATGGGATACTGTTAACAAGAAATTTAAAGAGGTTGTGGCTGCTCGAGGTAGGAAGGGAACAGGAAGGTTTGAGCAGGTTGAGCAGCTCACCTTCTTGACAAAAGTTGCCAAGACCCCTGCACAAAAGCTTGAGATCCTTTTTAGTGTCATTTCTTCTCAGTTTGATGTTAACCCAGGTCTTACTGGACACATGCCTATAAACGTATGGAAAAAGTGTGTGCAAAATATGCTTGTTGTACTTGACATTCTTGTGCAGCATTCCAACATAGTGGTGGATGATATGATTGAACCTGATGAGAATGAAAGCCAAAAGGGAGCTGACTATGATGGAAAAATTCGTGTGTGGGGAAATCTGGTTGCTTTCTTGGAAAGAATAGATACAGAGTTTTTTAAAAGCTTACAATGCATAGATCCACACACTCGTGAATATGTTGAAAGACTTAGGGATGAGCCAATGCTTTCAGTTCTTGCCCAAGATATCCAAGAATATTTTGAACGGGTTGGGGATTTCAAAGCAGCTTCCAAGGTTGCCTTGAGGCGGGTCGAACTTATCTACTACAAACCACAGGAGGTTTATGATGCAATGAGAAAGTTGGCTGAACAGACAGAAGATGGAGATCATGGAGAATCAGGGGAGGATATTAAAGTGGTTGAGGAAAGTAGGGGTCCATCTGCTTTTATTGTCATTCCAGAGATTGTGCCTCGAAAACCCACCTTCCCAGAGAGTAGTAGAGCCTTGATGGATATTCTGGTGACTCTCATATATGGGCATGGAGATGAGCGAACGAAGGCCCGAGCAATGCTCTGTGATATTTACCACCATGCCCTGTTGGATGAGTTTTCTACTTCTCGTGATTTGCTGCTGATGAGCCACTTGCAAGACAGTATTCAACATATGGACATTTCAACCCAGATTCTATTCAACCGGGCTATGTCTCAGCTTGGTCTTTGTGCATTCCGTGCTGGACTGGTTAATGAAGGACATGGCTGCCTTTCTGAATTGTATTCAGGTGGACGAATAAAGGAATTAGTTGCGCAAGGTGTCTCACAAAGCCGTTATCATGAGAAGACTCCAGAACAGGAAAGGCTCGAAAGAAGACGGCAAATGCCATACCATATGCACATAAATCTTGAGCTTCTTGAGGCTGTTCACTTGATCTGTGCTATGTTGCTTGAAGTTCCCAACATGGCAGCTAACATCCATGATGCGAGGCGAAAGGTCATCAGCAAGACATTTAGGCGACTGCTCGAGGTGAGTGAGAGGCAGACATACACAGGCCCACCTGAAAGTGTCCGGGACCACATAATGGCTGCCACCCGAGCACTCAATAAAGGAGATTTCCAAAAGGCTTATGATGTTATCACATCCCTTGATGTATGGAAGCTCCTTAGAAACCGTGATCATGTCCTTGAGATGCTAAAGGGTAAGATCAAGGAAGAGGCTTTGAGAACCTACCTGTTTACCTACTCCTCATCTTACGAGTCTCTCAGCTTGGACCAGCTTACCAAACTGTTTGACCTCTCTGAGACTCAGATCCATAGCATTGTTAGCAAGATGATGATCAATGAAGAGCTTCATGCGAGCTGGGATCAGCCAAGCAGGTGCATTGTTTTTCATGATGTTGAGTACACCAGATTGCAGGCTCTGGCATTCCAGTTGACCGAGAAGTTGACTGTTCTAGCTGAGAGTAATGAAAGAGCCGTAGAGGCAAGGTTAGGTGGGGGAGGACTGGATCTGCCTATGAGGCGAAGAGACAACAACCAAGACTACATGGGAACAGGTGCCCCAAATAGATGGCAAGACAACAACTTGTCTTTTACTCAAGGAGGAAGACAGGGTGGTGGAAGTAGAGGGAGGTTATCAGGCTTGGGACAAGGTTTAGGAGGTGGTGGATATTCAAGGGACCGAACAAGCCAGTCTAGAGGGGGCGGATCGGGCTACCAGAGTAATCGTAATCAGACAGGTTTGTCTGGAAGGGGGGCCCAAATGGATGGGTCTGGCCGGATGGTCAGTCTCAATAGAGGGGTTCGAGCTTAG 2778 45.5 MASRFWTQSGSDTEDEGSEYDEEIENGEQDDTTAQGEAAGSRYLLGIDADSDDSDGQRRVVRSAKDKRFEEMSATVDQMKNAMKINDWVSLQESFDKMNKQLEKVMRVTESEKVPTLYIKALVMLEDFLNQALANKEAKKKMSSSNAKALNSMKQKLKKNNKQYEEAINKFRENPESEEEKEEDEESEEEDESGSEIEEDPSKIAMSEDEGEEEDDQDDRAGGWEKMMSKKDKLMDKQFMKDPSEITWDTVNKKFKEVVAARGRKGTGRFEQVEQLTFLTKVAKTPAQKLEILFSVISSQFDVNPGLTGHMPINVWKKCVQNMLVVLDILVQHSNIVVDDMIEPDENESQKGADYDGKIRVWGNLVAFLERIDTEFFKSLQCIDPHTREYVERLRDEPMLSVLAQDIQEYFERVGDFKAASKVALRRVELIYYKPQEVYDAMRKLAEQTEDGDHGESGEDIKVVEESRGPSAFIVIPEIVPRKPTFPESSRALMDILVTLIYGHGDERTKARAMLCDIYHHALLDEFSTSRDLLLMSHLQDSIQHMDISTQILFNRAMSQLGLCAFRAGLVNEGHGCLSELYSGGRIKELVAQGVSQSRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAANIHDARRKVISKTFRRLLEVSERQTYTGPPESVRDHIMAATRALNKGDFQKAYDVITSLDVWKLLRNRDHVLEMLKGKIKEEALRTYLFTYSSSYESLSLDQLTKLFDLSETQIHSIVSKMMINEELHASWDQPSRCIVFHDVEYTRLQALAFQLTEKLTVLAESNERAVEARLGGGGLDLPMRRRDNNQDYMGTGAPNRWQDNNLSFTQGGRQGGGSRGRLSGLGQGLGGGGYSRDRTSQSRGGGSGYQSNRNQTGLSGRGAQMDGSGRMVSLNRGVRA 925
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3770923 3774666 + Conep19aG0047300.1 Cone19ag0456 458893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0456 925 MobiDBLite consensus disorder prediction 140 159 - -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 879 907 - -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 48 65 - -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 837 861 - -
Cone19ag0456 925 Pfam PCI domain 715 787 IPR000717 -
Cone19ag0456 925 Gene3D - 729 792 IPR036388 -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 14 30 - -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 1 41 - -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 205 219 - -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 46 65 - -
Cone19ag0456 925 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 50 650 IPR008905 GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro)
Cone19ag0456 925 ProSiteProfiles PCI domain profile. 618 790 IPR000717 -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 178 197 - -
Cone19ag0456 925 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 893 IPR027516 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER)|GO:0006413(InterPro)|GO:0031369(InterPro)|GO:0031369(PANTHER)
Cone19ag0456 925 MobiDBLite consensus disorder prediction 170 223 - -
Cone19ag0456 925 Hamap Eukaryotic translation initiation factor 3 subunit C [EIF3C]. 2 865 IPR027516 GO:0003723(InterPro)|GO:0003743(InterPro)|GO:0005852(InterPro)|GO:0006413(InterPro)|GO:0031369(InterPro)
Cone19ag0456 925 Coils Coil 147 174 - -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 140 157 - -
Cone19ag0456 925 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 719 807 IPR000717 -
Cone19ag0456 925 MobiDBLite consensus disorder prediction 820 925 - -
Cone19ag0456 925 SUPERFAMILY Winged helix DNA-binding domain 714 789 IPR036390 -
Cone19ag0456 925 FunFam Eukaryotic translation initiation factor 3 subunit C 716 794 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0504 Cone-Chr13:5417701 Cone19ag0456 Cone-Chr19:3770923 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0456 K03252 - rcu:8258412 1372.07