Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0477 ATGTTTTCTTCATCTTCATCTTCATCTTTATCTTCAGCTTCATCTTCGGCTTCATCTTCATCTTATCGATCGGTGCTAGTAGTCCCTGTGATCACCATTTTCGCGTTCCTGGTTTATCAAGCAAACGCTCAGCTGAACACTACATTTTACAGTACAACATGCCCTAATGTGTCTAGCATTGTGCGTGGGGCCATCCAGCAAGCTCTTCAATCCGACCCAAGAATCGGCGCCAGCCTCATTCGACTTCATTTCCACGATTGCTTTGTCGATGGATGTGATGGTTCGATATTGCTGGATAATAGTGGAAGCATACAGAGTGAGAAAGACGCGGCTCCCAACACTAACTCGACACGTGGTTTTAATGTGGTCGACAACATAAAGACGGCTGTTGAAAACTCTTGTGCTGGTGTTGTTTCATGTGCTGATATTCTTGCCTTGGCTGCTGAATCCTCTGTCTCCTTGGGTGGAGGTCCATCTTGGAATGTTCCATTAGGAAGAAGAGACAGTTTAACTGCTAATCAAGCCGGTGCCAACGCTTCCATACCGTCCCCATTCGAAGGCCTTAACAATATCACTTCCAAATTCTCTGCAGTCGGATTAAACACCAATGACCTTGTCGCATTATCAGGCGCACATACATTTGGACGAGCTCAATGTCGACTATTCAGCAACCGGCTCTACAATTTCAGTAACACGGGCAATCCCGACCCGACTCTAAGCTCGTCGCTCTTAGCCACTCTGCAACAAACATGTCCCCAAAACGGCAGCGGATTTGCGATAGCCAACCTCGATCCTAGTACTCCGGATAGTTTCGACAACAATTACTTTACAAACCTTCAAAACAATCAAGGCCTTCTTCAATCAGACCAAGAGCTATTTTCCACTAGCGGCGCGCCTACGGTAGCTATTGTGAATAGCTTTGCAGCAAATCAAAGTGCTTTCTTTGCAAGCTTTGTTCAGTCGATGATTAACATGGGAAATATTAGTCCTTTGACTGGAAACAGTGGTGAAATTAGATTGGATTGTAAGAAGGTTAATGGAAGTTGA 1047 45.08 MFSSSSSSSLSSASSSASSSSYRSVLVVPVITIFAFLVYQANAQLNTTFYSTTCPNVSSIVRGAIQQALQSDPRIGASLIRLHFHDCFVDGCDGSILLDNSGSIQSEKDAAPNTNSTRGFNVVDNIKTAVENSCAGVVSCADILALAAESSVSLGGGPSWNVPLGRRDSLTANQAGANASIPSPFEGLNNITSKFSAVGLNTNDLVALSGAHTFGRAQCRLFSNRLYNFSNTGNPDPTLSSSLLATLQQTCPQNGSGFAIANLDPSTPDSFDNNYFTNLQNNQGLLQSDQELFSTSGAPTVAIVNSFAANQSAFFASFVQSMINMGNISPLTGNSGEIRLDCKKVNGS 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 3919418 3920888 - Conep19aG0049500.1 Cone19ag0477 458914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0477 348 FunFam Peroxidase 182 325 - -
Cone19ag0477 348 Gene3D - 49 346 - -
Cone19ag0477 348 Gene3D Peroxidase, domain 2 182 325 - -
Cone19ag0477 348 CDD secretory_peroxidase 44 345 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cone19ag0477 348 PRINTS Plant peroxidase signature 78 98 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Plant peroxidase signature 54 73 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PANTHER PEROXIDASE 72-RELATED 35 345 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Cone19ag0477 348 SUPERFAMILY Heme-dependent peroxidases 44 346 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 FunFam Peroxidase 48 192 - -
Cone19ag0477 348 Pfam Peroxidase 61 310 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 ProSitePatterns Peroxidases active site signature. 76 87 IPR019794 GO:0004601(InterPro)
Cone19ag0477 348 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Haem peroxidase superfamily signature 156 168 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Haem peroxidase superfamily signature 76 90 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cone19ag0477 348 ProSiteProfiles Plant heme peroxidase family profile. 44 346 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0477 Cone-Chr19:3919418 Cone1ag0415 Cone-Chr1:3631426 8.63E-108 dispersed
Cone8ag1448 Cone-Chr8:11200470 Cone19ag0477 Cone-Chr19:3919418 1.46E-74 dispersed
Cone13ag0525 Cone-Chr13:5541151 Cone19ag0477 Cone-Chr19:3919418 3.20E-127 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0477 K00430 - mdm:139190132 519.235