Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0587 ATGGAAAATGAGCCTTTTCTCGCCTCCCAAACAAGGGCCCAACCACCTCAACGACAATCCCATGATTACCCATTTCCAAATCCCCATTTCCGACAAGACCCACAGCTCTCTTCTTCTCAAATCGGCAAGAAAAAACCTGGCAGTCTTCACCGCTGCAAAACAGCTCCGGCCATGTCCGCCATGCGAGACCTCAAACCCAAACCACCCCAGATTCCGAAACCGCAATCCGAATCCAGCTCCATGATCAGGCAAGCTCTTTTCCTTCTATTGATCTATCTCCTTCTAGGAGTTTTTCTCTACTCTTTCAACAGGGACAACTTCTCTGGTTTAGAGACCCACCCAGTTGTGGACGCCCTTTACTTCTGTATAGTCACCATGTGCACAATCGGCTATGGCGATATCACCCCCTTAACCCCCATCACTAAAATATTATCTTGCTTCTTTGTATTGGTTGGATTTGGATTCATAGATATTTTACTTAGTGGGGTTGTGAATTATGTACTGGACTTGCAAGAAAACATGATCTTGACAGGGATTCTAATGGGTAGAAGCGAAAATGGGTTCAATTCGGCTAAGAATTATATAGTGGATGTAGAGAAGGGGAGGATGAGGATAAGATTGAAAGTTGGTTTAGCACTTGGAGTGGTGGTATTGTGTATTGGAATTGGAGCATTGTTTTTGTATTATGTAGAGGGTTTGGATTGGATTGATTCAGTATATTTAGCGGTTATGTCGGTTACTACGGTTGGTTATGGTGATCGGGCCTTTAAGACACTTACTGGCCGGTTGTTTGCTGCAATTTGGCTTCTGTTTTCGACATTGGCCGTGGCTCGGGCATTTCTGTATCTTGTTGAGGCGAGGATTGATAAGAGACATAGAAGGATTAGTAACTGGGTTTTGCATAGGGATATCACTGTGGAGGATTTGCTTGCTGCTGATACTAACAATCATGGTTTCATCAATAAATCGGAGTACGTGATATACAAACTTAAAGAGATGGGGAAGATCGGGGAGAAGGATTTGTTGCAAATCTGCAATCAGTTCAGCAAGATTGACCGCAACGATTCCGGAAAGATAACGCTCCCTGATCTGTTCAAGTATCACTCGTGA 1110 43.87 MENEPFLASQTRAQPPQRQSHDYPFPNPHFRQDPQLSSSQIGKKKPGSLHRCKTAPAMSAMRDLKPKPPQIPKPQSESSSMIRQALFLLLIYLLLGVFLYSFNRDNFSGLETHPVVDALYFCIVTMCTIGYGDITPLTPITKILSCFFVLVGFGFIDILLSGVVNYVLDLQENMILTGILMGRSENGFNSAKNYIVDVEKGRMRIRLKVGLALGVVVLCIGIGALFLYYVEGLDWIDSVYLAVMSVTTVGYGDRAFKTLTGRLFAAIWLLFSTLAVARAFLYLVEARIDKRHRRISNWVLHRDITVEDLLAADTNNHGFINKSEYVIYKLKEMGKIGEKDLLQICNQFSKIDRNDSGKITLPDLFKYHS 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5180283 5182410 - Conep19aG0060700.1 Cone19ag0587 459024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0587 369 Pfam Ion channel 216 285 IPR013099 -
Cone19ag0587 369 Pfam Ion channel 88 167 IPR013099 -
Cone19ag0587 369 MobiDBLite consensus disorder prediction 1 20 - -
Cone19ag0587 369 FunFam Two-pore potassium channel 3 192 306 - -
Cone19ag0587 369 SUPERFAMILY EF-hand 309 367 IPR011992 -
Cone19ag0587 369 Gene3D - 191 305 - -
Cone19ag0587 369 Gene3D - 73 177 - -
Cone19ag0587 369 SUPERFAMILY Voltage-gated potassium channels 200 309 - -
Cone19ag0587 369 PRINTS Two pore domain K+ channel signature 247 256 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone19ag0587 369 PRINTS Two pore domain K+ channel signature 124 152 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cone19ag0587 369 ProSitePatterns EF-hand calcium-binding domain. 352 364 IPR018247 -
Cone19ag0587 369 MobiDBLite consensus disorder prediction 1 50 - -
Cone19ag0587 369 SUPERFAMILY Voltage-gated potassium channels 78 167 - -
Cone19ag0587 369 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 116 297 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(InterPro)|GO:0071805(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag1423 Cone-Chr10:11013242 Cone19ag0587 Cone-Chr19:5180283 1.18E-101 dispersed
Cone19ag0587 Cone-Chr19:5180283 Cone9ag0915 Cone-Chr9:4502453 1.20E-122 dispersed
Cone19ag0587 Cone-Chr19:5180283 Cone5ag1609 Cone-Chr5:11296569 1.23E-131 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0587 K05389 - rcu:8265882 527.324