Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0602 ATGGAGCTCAGGATTTGTCAGATTGTGATGCTGATGGTGGTGGTGTTGGCGGTGGGGCCGGCGGCGTCGAATGATTTTGATAGATCGAAGAGTGGAAATGCTACTACTGCTTCTCTTGAACTGATAGCAAGAGAGCAGCTGGAGGAAGCTTTGTTTTCGATTCTAGATAACGGAGCCTCCTCCCTCTCATCCTCACCCTCCCCCAATCCATTGATAGTTCCTCTCACTCTCATTCAGGGAGCTGCTTCTTCTGGAGCTGTCTGTCTGGATGGAACGCTGCCCGGTTACCACCTGCATCGTGGCTATGGATTGGGTGCTAACAGCTGGCTTATTCAGTTAGAGGGTGGAGGTTGGTGTAATACTATCAGAAGTTGTGTTTTCCGCAAAACCACTCGCCGTGGTTCTTCAAAATTTATGGAGAAGAATTTACCACTCACTGGAATACTGAGCAATAAACCTGAGGAAAACCCTGATTTCTTCAACTGGAACAGAGTGAAGCTGCGTTACTGTGACGGGGCGTCTTTCATGGGGGACAGCCAGAATGAGGCAGCACAACTTAATTTTCGAGGACAACGGATATGGTTAGCTGCTATGGACGAACTAATGTCACAGGGAATGAAGAACGCCAACCAGGCCCTTCTTTCAGGATGCTCAGCTGGAGGTCTTGCATCCATACTACACTGCGATGAATTTCGAGACTTATTTCCTTATACTACCAAAGTAAAATGTCTTAGCGATGCAGGACTCTTCCTTGATGCAGTTGATGTATCTGGCGGGCGCATACTGAGGAACATGTTTGGGGGCGTGGTTAGCTTACAGGGAGTGCAAAAGTCTCTTCCAAATACTTGTATCAACCACCTGGATCCAACATCGTGCTTCTTCCCTGAGCATGAGATTTCAAATGTTAAGACCCCTCTGTTTCTTCTCAACGCTGCATATGATGCATGGCAGCTTCAGGCTAGTTTAGCTCCACCATCAGCTGATCCACATGGCACTTGGAATCAATGCAAACAAAACCATGCACTCTGTAATTCATCTCAGATACAGTTTCTCCAAGACTTTAGAATTCAAATGCTTGATGCCGTCAAGGGTTTCCTATCATCCAACCAAAACGGTGCATTCATTAATTCATGTTTTGCTCATTGTCAGTCTGAGAGACAGGATACATGGTTTGCAGATGATTCTCCCCTTGTCGGAAAGAAGGCAATTGCATTGGCAGTGGGAGATTGGTACTTTAATCGGGAAAGTGTAAAAGCCATTGACTGTGCATACCCATGTGACAATACCTGCCACAATCTGGTCTTCAAATGA 1311 46.3 MELRICQIVMLMVVVLAVGPAASNDFDRSKSGNATTASLELIAREQLEEALFSILDNGASSLSSSPSPNPLIVPLTLIQGAASSGAVCLDGTLPGYHLHRGYGLGANSWLIQLEGGGWCNTIRSCVFRKTTRRGSSKFMEKNLPLTGILSNKPEENPDFFNWNRVKLRYCDGASFMGDSQNEAAQLNFRGQRIWLAAMDELMSQGMKNANQALLSGCSAGGLASILHCDEFRDLFPYTTKVKCLSDAGLFLDAVDVSGGRILRNMFGGVVSLQGVQKSLPNTCINHLDPTSCFFPEHEISNVKTPLFLLNAAYDAWQLQASLAPPSADPHGTWNQCKQNHALCNSSQIQFLQDFRIQMLDAVKGFLSSNQNGAFINSCFAHCQSERQDTWFADDSPLVGKKAIALAVGDWYFNRESVKAIDCAYPCDNTCHNLVFK 436
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5311186 5314863 - Conep19aG0062200.1 Cone19ag0602 459039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0602 436 Pfam Pectinacetylesterase 69 415 IPR004963 GO:0016787(InterPro)
Cone19ag0602 436 SUPERFAMILY alpha/beta-Hydrolases 177 316 IPR029058 -
Cone19ag0602 436 PANTHER NOTUM-RELATED 44 433 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0844 Cone-Chr10:4294637 Cone19ag0602 Cone-Chr19:5311186 4.72E-192 dispersed
Cone19ag0602 Cone-Chr19:5311186 Cone5ag0108 Cone-Chr5:497092 2.72E-220 dispersed
Cone13ag0423 Cone-Chr13:3895824 Cone19ag0602 Cone-Chr19:5311186 2.15E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0602 K19882 - gmx:100785270 642.114