Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone19ag0644 | ATGTCTTCATCATCTATGGACCTCCTTTTTCCATCCTCCTCCTTCTACCTCTTCTTCTTCGCCCTTATTTCTCTGTACCTCTACCATCTCTTCTCCACCACTGCCTCAAAAGAACATGTAAGAACAACCCATGGCTTTAAGATCTACCCCATAGTCGGAACCTTGCCCGACTTCCTCCGAAACCGGCACCGTTTTCTCGACTGGACCACAGATGTCCTTCGCAACTGCCCGACAAACACTTCCATGTTTTGTAGACCGGGGAAAGTCCAAGGAATCATCACGGCGAACGCGTTGAACGTGGAGCACTTCCTCAAGACCAACTTCGAAAACTACCCGAAAGGCGACCGCTTCATATCTCTCCTCCAAGACTTTCTCGGTCGAGGAATATTCAACTCCGACAGCGAAATCTGGAAGGTGCAGAGAAAAACCGCCAGCTACGAGTTCAACACGAAATCGATGAGAAATTTTGTTATCGAAAACGTCACAGTTGAGAACCGGACCAGGTTGATCCCTGTTCTGGAGAAAGCTTCCGAAACTGAGCGCGTTCTGGATCTCCAGGACGTTTTGGAGCGTTTTGCCTTTGACAATATCTGCAAACTGGCGTTCAACATCGACCCGGGTTGTCTTGGCTGCGACGGAACCGCCGGTTCAGGGTTCATGAGGGATTTCGAAAATGCAGCCACGCTTAGCTCCGGCAGGTTCATGTACGCTATTCCATTCGTGTTCAAGATCAAGAAGTTCTTCAACTTGGGTTCGGAGAAAGAGCTGAAAGAAGCAATAGCGACGGTTCATAAATTCGCCGACGATATCATAATTCAAAGGATGGAAGAGAAGATGGCCAAAAAACAAGACGAGGATATCCTCTCTCGCTTTATCGGCAAAGGAGACGATATCTCGGCAGAGTTTCTCCGAGATATTATTATAAGCTTCATTCTGGCAGGCCGAGACACGACATCGTCGGGTTTAAGCTGGTTCTTCTGGATATTATCATCAAGACCTGACGTGGAGGAAAAAATACTGAACGAGCTCGAAACGGTTCGTTTCAGAAACGGGAAAAAACCGGGCGATTCCTACACTTTCGACGAAATCCGCGACATGCAGTACCTCCACGCCGCTATTTCCGAAACGATGAGGCTGTACCCGCCTGTACCGGTCGACACGAGGGCTTGTTTGAGAGACAACGTGTTGCCCGACGGAACGTTTGTTGGGAAAGATTGGTTTGTGACGTATCACACGTACGCGATGGGGAGGATGGAGAGTTTGTGGGGGAAGAACTGCTGCGAGTTTGTTCCGGACAGGTGGTTGGAAAACGGAGTTTGCAAGGTTGAAAGTCCGTTTCGTTTCCCGGTTTTTCATGCGGGGCCCAGGATGTGCTTGGGGAAAGAAATGGCGTATATTCAGATGAAGTCGATTGCAGCGGCGGTAATAGAGCGGTTCAGGGTTGAGGTTGTTGGTAAGAATAAGGAGAAAGTGCCTGATCACTTGTTGTCTCTGACTCTGAGGATGAAAGATGGGTTACGTGTACGCATCAGGACTAGATGA | 1542 | 48.9 | MSSSSMDLLFPSSSFYLFFFALISLYLYHLFSTTASKEHVRTTHGFKIYPIVGTLPDFLRNRHRFLDWTTDVLRNCPTNTSMFCRPGKVQGIITANALNVEHFLKTNFENYPKGDRFISLLQDFLGRGIFNSDSEIWKVQRKTASYEFNTKSMRNFVIENVTVENRTRLIPVLEKASETERVLDLQDVLERFAFDNICKLAFNIDPGCLGCDGTAGSGFMRDFENAATLSSGRFMYAIPFVFKIKKFFNLGSEKELKEAIATVHKFADDIIIQRMEEKMAKKQDEDILSRFIGKGDDISAEFLRDIIISFILAGRDTTSSGLSWFFWILSSRPDVEEKILNELETVRFRNGKKPGDSYTFDEIRDMQYLHAAISETMRLYPPVPVDTRACLRDNVLPDGTFVGKDWFVTYHTYAMGRMESLWGKNCCEFVPDRWLENGVCKVESPFRFPVFHAGPRMCLGKEMAYIQMKSIAAAVIERFRVEVVGKNKEKVPDHLLSLTLRMKDGLRVRIRTR | 513 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 5523495 | 5525036 | - | Conep19aG0066500.1 | Cone19ag0644 | 459081 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone19ag0644 | 513 | PRINTS | P450 superfamily signature | 449 | 458 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | PRINTS | P450 superfamily signature | 313 | 330 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | PRINTS | P450 superfamily signature | 371 | 382 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | PRINTS | P450 superfamily signature | 458 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | Pfam | Cytochrome P450 | 49 | 499 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | CDD | CYP86A | 86 | 506 | - | - | |
| Cone19ag0644 | 513 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 451 | 460 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone19ag0644 | 513 | PRINTS | E-class P450 group I signature | 370 | 388 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | PRINTS | E-class P450 group I signature | 448 | 458 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | PRINTS | E-class P450 group I signature | 302 | 319 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | PRINTS | E-class P450 group I signature | 322 | 348 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | PRINTS | E-class P450 group I signature | 458 | 481 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | SUPERFAMILY | Cytochrome P450 | 43 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | Gene3D | Cytochrome P450 | 26 | 513 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone19ag0644 | 513 | PANTHER | CYTOCHROME P450 | 28 | 506 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone19ag0644 | Cone-Chr19:5523495 | Cone2ag0970 | Cone-Chr2:35224812 | 7.55E-140 | dispersed | |
| Cone13ag0642 | Cone-Chr13:6450339 | Cone19ag0644 | Cone-Chr19:5523495 | 0 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone19ag0644 | - | - | - | 0.0 |