Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0646 ATGGAGTCCAATGGATGTTTCGGCAGCTTTCTTCAAACGGCCAAGCCGTACATCGCAATGATCTCTCTCCAGTTTGGCTATGCCGGCATGAACATCATCACTAAAGTCTCCCTCAACCGGGGGATGAGTCATTACGTGCTTGTTGTCTATAGACACGCCTTTGCCACCGCCGCTATGGCCCCCTTTGCTCTCGTTCTCGAGAGGAAAGTCCGGCCTAAGATCACATTCTCAATTTTCATGCAACTCTTCGTTCTTGGCCTTCTCGGTCCTGTCATCGACCAAAATTTCTACTACGCTGGACTCAAATTCACATCCCCAACTTTCTCTTGCGCAATGAGTAACATGCTCCCCGCAATGACATTCGTCTTGGCCGTTCTCTGCAGGATGGAGAAGTTGAACATGAAGAAAGTTATGTGTCAAGCGAAGGTGGCCGGAACGATAGTGACAGTGGTAGGAGCGATGTTAATGACACTATACAAAGGAAATGTTGTTAACTTCTTTTGGACATCGCATCTTCATCATATCGAACCCTCTTCCCCGGAAGATTCAGCAGCAGTAGGCAACAGTGACAAGGACTGGTTCAAAGGTTCCATCATGCTTATCATTGCAACATTGGCTTGGGCTTTCTTCTTCATCCTTCAAGCAGTGACAATGAAGAAATACACGGCTCATCTTTCTCTTACAACACTTGTATGCTTCTTGGGAACCCTACAATCCATCGCCGTCACCTTTGTCATGGAGCGAAAGCCCTCCGCCTGGACCATTGGATGGGACATGAACCTTCTCGCTGCAGCTTATGCCGGAATAGTTTCATCAGGGATTGCATACTATGTGCAAGGGATAGTGATGCAGAAAAGAGGGCCGGTTTTCGTCACGGCTTTTAGCCCCTTGATGATGATCATTGTTGCCATTATGGGCTCATTCATCCTTGCAGAGAAGATGTACGTTGGAGGTTTGCTTGGAGCTGGACTTATTATAATAGGACTATACTCGGTTCTATGGGGCAAATACAAGGAGTACAAGGAGAAGGAAGCAGAAGAAATTCCTGAAGTCATAAAGGGTGCTTCGACTGGGGGAGATCAAAACCTGATCAAGATGGAAACTGTTGAAGATACTAATGAACCGATCAATGACATAGAAATGCAGAAGAACCAAGCCGGTACCATGGTAGCCATGAGATCGGAACCGGTTTAA 1194 46.65 MESNGCFGSFLQTAKPYIAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATAAMAPFALVLERKVRPKITFSIFMQLFVLGLLGPVIDQNFYYAGLKFTSPTFSCAMSNMLPAMTFVLAVLCRMEKLNMKKVMCQAKVAGTIVTVVGAMLMTLYKGNVVNFFWTSHLHHIEPSSPEDSAAVGNSDKDWFKGSIMLIIATLAWAFFFILQAVTMKKYTAHLSLTTLVCFLGTLQSIAVTFVMERKPSAWTIGWDMNLLAAAYAGIVSSGIAYYVQGIVMQKRGPVFVTAFSPLMMIIVAIMGSFILAEKMYVGGLLGAGLIIIGLYSVLWGKYKEYKEKEAEEIPEVIKGASTGGDQNLIKMETVEDTNEPINDIEMQKNQAGTMVAMRSEPV 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5539031 5540556 + Conep19aG0066700.1 Cone19ag0646 459083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0646 397 PANTHER WAT1-RELATED PROTEIN 18 344 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone19ag0646 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 159 - -
Cone19ag0646 397 SUPERFAMILY Multidrug resistance efflux transporter EmrE 233 337 - -
Cone19ag0646 397 Pfam EamA-like transporter family 17 156 IPR000620 GO:0016020(InterPro)
Cone19ag0646 397 Pfam EamA-like transporter family 195 333 IPR000620 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag0785 Cone-Chr17:6051298 Cone19ag0646 Cone-Chr19:5539031 1.06E-78 dispersed
Cone19ag0646 Cone-Chr19:5539031 Cone1ag1474 Cone-Chr1:57038676 9.77E-172 dispersed
Cone3ag0503 Cone-Chr3:2497111 Cone19ag0646 Cone-Chr19:5539031 2.05E-211 transposed
Cone13ag0643 Cone-Chr13:6466531 Cone19ag0646 Cone-Chr19:5539031 7.83E-264 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0646 - - - 0.0