Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone19ag0647 | ATGGAAGCACCCTCCTTCAATACATGTTCAGAACACGAGGCTCGAATCAAAATTTCGAGACTACATGACAATGAAATCGGAAAACAAGGCCTGAGAAAACAGATTATTAGAGAAGGAACTTCATGGCAGACACCATTACCAGGAGATGAAGTCCACGTTCTTTTCAGCGGACGAGTTTTGGGCGGGGCAAGTCTAGATTCGAACCGGGATAAAGGAGTTCCTTTCACCTTCAAACTAGGCCAATGTGAGGTTATTAAGGGATGGGATGAAGGGATTAGAAGTATGAAGAAGGGTGAAAGAGCAATCTTTGCAATTCCACCAGATTTGGCCTATGGAGAAACCGGTTATCCACCATTGGTCTTGCCCGATTCAATACTCATTTATGAGATTGAGCTTCTGTCGTGGAGCTCCATCCGGGATATTTCTGGGCACGGAGAAATATTGAAGAAGATTACACAGGAAGGTGTGGGGTGGGCTACCCCTAAACATGCCGATGAAATTTATGTTAAGTATGAAGCAAGGCATGAAGATGGAACACTTATCTTAAAATCTGAGGATCCAATCGAGCTTTCTCTAGTGGATGATCATAGTTTCCCTGCAATAAGCAAAGCAGTAAAGACAATGAGAAGGGGAGAAAAAGCAGAGCTAGTTGTCAACTTCTCTTATGGTTTGAACCGGTTAGAAGTCCCGATCGGTTCTAAGTTAACTATCCAGCTTGAGCTTGTATCATGGAAAAGTGTAGTAGACATTGCTGGAGATAAGAAAGTCCTCAAAAAGATAATCGAAAACGGTCAAGGCTTTGACCGTCCGAATAAAGGGTCCCTAGTGAAAGTGAGATATACTGGTAGGCTTGAAGATGGATCGGTTTTTCAGCAGAAGGGATCATTTGAAAAACCGTTTGAGTTCATCGCAGCAGAAGATCAAGTACATGAAGGATTGGAAAAGGCAATATTGACGATGAAGAAGGGAGAAAGGGCCATTGTTACAATCAGTGCAGACTATCCAAGTAACGGTCATTATGTTACGGTCCCTAAAAATTCGGTTCTACGTTATGATGTCAATTTGATCGAATTCACAAAGGAAAAACCTTTTTGGAAGATGGAAACATGTGAGAAAATAGAAGCTTGCGAGATGATCAAACATGACGGAAATGTGCTTTTCAAATCCGGCAAGTTTCAACGCGCGTCTGAGAAGTACGATAAGGAAAGTTTACTATAA | 1218 | 41.95 | MEAPSFNTCSEHEARIKISRLHDNEIGKQGLRKQIIREGTSWQTPLPGDEVHVLFSGRVLGGASLDSNRDKGVPFTFKLGQCEVIKGWDEGIRSMKKGERAIFAIPPDLAYGETGYPPLVLPDSILIYEIELLSWSSIRDISGHGEILKKITQEGVGWATPKHADEIYVKYEARHEDGTLILKSEDPIELSLVDDHSFPAISKAVKTMRRGEKAELVVNFSYGLNRLEVPIGSKLTIQLELVSWKSVVDIAGDKKVLKKIIENGQGFDRPNKGSLVKVRYTGRLEDGSVFQQKGSFEKPFEFIAAEDQVHEGLEKAILTMKKGERAIVTISADYPSNGHYVTVPKNSVLRYDVNLIEFTKEKPFWKMETCEKIEACEMIKHDGNVLFKSGKFQRASEKYDKESLL | 405 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 19 | 5542991 | 5546003 | + | Conep19aG0066800.1 | Cone19ag0647 | 459084 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone19ag0647 | 405 | SUPERFAMILY | FKBP-like | 142 | 245 | - | - | |
| Cone19ag0647 | 405 | Gene3D | - | 140 | 245 | IPR046357 | GO:0003755(InterPro) | |
| Cone19ag0647 | 405 | Gene3D | - | 20 | 139 | IPR046357 | GO:0003755(InterPro) | |
| Cone19ag0647 | 405 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 159 | 240 | IPR001179 | GO:0003755(InterPro) | |
| Cone19ag0647 | 405 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 43 | 133 | IPR001179 | GO:0003755(InterPro) | |
| Cone19ag0647 | 405 | Pfam | FKBP-type peptidyl-prolyl cis-trans isomerase | 269 | 356 | IPR001179 | GO:0003755(InterPro) | |
| Cone19ag0647 | 405 | SUPERFAMILY | FKBP-like | 17 | 137 | - | - | |
| Cone19ag0647 | 405 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 164 | 245 | IPR001179 | GO:0003755(InterPro) | |
| Cone19ag0647 | 405 | Gene3D | - | 246 | 361 | IPR046357 | GO:0003755(InterPro) | |
| Cone19ag0647 | 405 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 273 | 359 | IPR001179 | GO:0003755(InterPro) | |
| Cone19ag0647 | 405 | ProSiteProfiles | FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. | 48 | 136 | IPR001179 | GO:0003755(InterPro) | |
| Cone19ag0647 | 405 | Gene3D | Tetratricopeptide repeat domain | 362 | 405 | IPR011990 | GO:0005515(InterPro) | |
| Cone19ag0647 | 405 | SUPERFAMILY | FKBP-like | 251 | 376 | - | - | |
| Cone19ag0647 | 405 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 142 | 244 | IPR050689 | GO:0000413(PANTHER)|GO:0003755(PANTHER)|GO:0005737(PANTHER)|GO:0061077(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone10ag0348 | Cone-Chr10:1656372 | Cone19ag0647 | Cone-Chr19:5542991 | 6.11E-45 | dispersed | |
| Cone12ag0992 | Cone-Chr12:8462308 | Cone19ag0647 | Cone-Chr19:5542991 | 6.38E-19 | dispersed | |
| Cone15ag0569 | Cone-Chr15:2863758 | Cone19ag0647 | Cone-Chr19:5542991 | 3.40E-120 | dispersed | |
| Cone17ag0894 | Cone-Chr17:7037509 | Cone19ag0647 | Cone-Chr19:5542991 | 2.25E-89 | dispersed | |
| Cone19ag0647 | Cone-Chr19:5542991 | Cone8ag1018 | Cone-Chr8:9448572 | 1.68E-18 | dispersed | |
| Cone19ag0647 | Cone-Chr19:5542991 | Cone14ag0548 | Cone-Chr14:2729130 | 1.19E-127 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone19ag0647 | - | - | - | 0.0 |