Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0659 ATGGATCTTCGTCTGGTTTCAGCGAGGCATCCAGCTATGTATATCTTCTCATTCTTCTTCTTCTTCGTGTTGATTTCTAAGAAGATTCAGCTGGTTGGAGCAGGAGACGCAGAGACGCTTCTAACAATGAAAGCCACAATCGACCGTGGAAACTCGCTTCCATGGAGATTAGGAACCTCCGTTTGCGAATGGAAAGGTGTGAAAGAATGTACGAATGGTAGAGTTACGAAGCTCGTTTTAGAGTATTTGAATCTCACCGGAATTCTCGACCATAAGATCTTGAACCGATTAGATCAGCTTCGTGTTCTCAGCTTCAAATCCAATTCACTCTCCGGCCAAATCCCCGACCTCTCCGGCCTCGTCAATCTCAAATCTCTTTTCCTCAACGAAAACTTCTTCTCCGGTGAGTTCCCGACCTCACTCTCCGTCCTCCACCGCTTGAAAGTAGTGGTCCTGGCCAAAAACCAAATCTCCGGCCAAATTCCAGACTCGATGCTCAAACTCAAGCGACTCTACGTCTTCTACTTGCAGGACAACCAGCTCACCGGAACTATCCCGCCATTTAACCAGACAAGTCTCAGATTCTTCAACGTCTGTAACAACTTCCTCTCCGGCGAGATCCCGATAACTCCCGCCTTAGTCCGATTCAACACGTCGTCGTTCTCAGGTAACATCGACCTCTGCGGAGATCAAATCAACAACCCCTGCAAATCCACAATATTCACACCACCAGCATTGAGTCCAAGCTATCCAAAACAACCGTCAAAACGCTCCAAACTAATCAAAATCATAGCCGGAAGCGTAGGCGGATTCATCGGACTCCTACTCTGCCTGGCTGCGCTCTGTTTAGTCTGTTCAAAACGCGAGGGAAGAAGAAAGGAATCGAAAGAGATAGTCATGAGTAAGAAAGAAGTCGAAGCGTTGGAGGGTGGAGGAGGAAGGGAAGGAGCAGGTGGCGGTGGCAGAGGAGGTAATAACGGAGGAAAGCAAGGGGGATTCCAATGGGAAGGAGAGGGAGGTCTAGGGAGCTTAGTGTTCTGCGGAGCAGAGGATCAGAAAATGAGCTACAGCTTAGAGGATTTATTAAAAGCGTCGGCCGAAACGTTAGGGAGAGGGACGATAGGGAGCACGTATAAAGCGGTGATGGAGTCTGGGTTCATAGTGACAGTGAAGAGGCTGAAAGACGCTAAGTACCCGAGCGTTGACCAGTTCTCGAGACAGATGGAGGTTCTTGGTAGGTTGACTCATCCTCATCTGGTGCCTCTCAGGGCCTATTTCCAGGCTAAGGAGGAACGCCTGCTCGTATACGATTACTTCCCCAACGGCAGCCTATTCTCTCTCATCCATGGATCAAGAAGTTCAGGTGGTGGAAAGCCACTCCACTGGACATCATGCCTGAAAATAGCCGAAGACCTAGCAACCGCTTTGCTCTACATCCATCAAAACCCAGCCGGCTTGACTCACGGAAACTTAAAATCCTCAAACATCCTCTTAGGCTCCGATTTTGAGTCCTGCCTAACTGATTACGGTCTCACCTCATTCCGAGACCCTGACTCTCTAGAAGAACCAAGTGCAGCATCTCTCTTCTACAGAGCCCCTGAATGCCGTGACATTAGAAAGCCCGTAACTCAACAAGCCGATGTATACAGCTTTGGTGTCCTCCTTTTGGAGCTTCTAACCGGAAAGACACCTTTCCAAGACCTTGTCCAAGAACATGGCTCGGATATTCCTAGATGGGTTAGGTCTGTTCGAGAGGAAGAGACCGAGTCAGGGGATGACCCTGCCTCGGCTTCCGAGGAGAAACTTCAGGTGCTTTTAAACATAGCAATGGCTTGTGTCTCTGTGGCGCCCGAGAACCGGCCTACTATGATAGAGGTTTTGAAGATGATTAGAGATACAAGGGCCGAGGCTCAAGTGTCGTCTAATAGTAGTGACCACTCGCCTGGGAGATGGTCGGATACAGTTCAGAGTTTGCCCAGGGAGGAACATTTGAGTATCTGA 2001 49.18 MDLRLVSARHPAMYIFSFFFFFVLISKKIQLVGAGDAETLLTMKATIDRGNSLPWRLGTSVCEWKGVKECTNGRVTKLVLEYLNLTGILDHKILNRLDQLRVLSFKSNSLSGQIPDLSGLVNLKSLFLNENFFSGEFPTSLSVLHRLKVVVLAKNQISGQIPDSMLKLKRLYVFYLQDNQLTGTIPPFNQTSLRFFNVCNNFLSGEIPITPALVRFNTSSFSGNIDLCGDQINNPCKSTIFTPPALSPSYPKQPSKRSKLIKIIAGSVGGFIGLLLCLAALCLVCSKREGRRKESKEIVMSKKEVEALEGGGGREGAGGGGRGGNNGGKQGGFQWEGEGGLGSLVFCGAEDQKMSYSLEDLLKASAETLGRGTIGSTYKAVMESGFIVTVKRLKDAKYPSVDQFSRQMEVLGRLTHPHLVPLRAYFQAKEERLLVYDYFPNGSLFSLIHGSRSSGGGKPLHWTSCLKIAEDLATALLYIHQNPAGLTHGNLKSSNILLGSDFESCLTDYGLTSFRDPDSLEEPSAASLFYRAPECRDIRKPVTQQADVYSFGVLLLELLTGKTPFQDLVQEHGSDIPRWVRSVREEETESGDDPASASEEKLQVLLNIAMACVSVAPENRPTMIEVLKMIRDTRAEAQVSSNSSDHSPGRWSDTVQSLPREEHLSI 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5611580 5615598 - Conep19aG0068000.1 Cone19ag0659 459096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0659 666 ProSiteProfiles Protein kinase domain profile. 363 635 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0659 666 MobiDBLite consensus disorder prediction 637 666 - -
Cone19ag0659 666 FunFam Nuclear pore complex protein NUP107 33 187 - -
Cone19ag0659 666 Gene3D Ribonuclease Inhibitor 34 189 IPR032675 -
Cone19ag0659 666 Pfam Protein kinase domain 366 628 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0659 666 Gene3D Phosphorylase Kinase; domain 1 345 438 - -
Cone19ag0659 666 MobiDBLite consensus disorder prediction 309 331 - -
Cone19ag0659 666 SUPERFAMILY Protein kinase-like (PK-like) 367 630 IPR011009 -
Cone19ag0659 666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 35 636 IPR046959 -
Cone19ag0659 666 Pfam Leucine rich repeat N-terminal domain 35 67 IPR013210 -
Cone19ag0659 666 Gene3D Transferase(Phosphotransferase) domain 1 439 654 - -
Cone19ag0659 666 SUPERFAMILY L domain-like 55 228 - -
Cone19ag0659 666 Gene3D Ribonuclease Inhibitor 190 239 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0659 Cone-Chr19:5611580 Cone9ag1338 Cone-Chr9:10055351 4.12E-131 dispersed
Cone13ag0662 Cone-Chr13:6608801 Cone19ag0659 Cone-Chr19:5611580 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82386 PF03372 Exo_endo_phos 1.10E-30 CL0530 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0659 - - - 0.0