Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0665 ATGGAGGGAGGAGTGATCCCTAAGAAAACTGCATGCAAAGACACAAAAGGCCAAATGCATGATCATTTGTTCTCTTTGAGTCTTGATGATATACTTGATGAACACTTCTACGAGCACAAGGAATCGGATCCAAATCCAGAGGATTGGGCTCTTAATGGGTCAACCCGATTTATTGACTGGCGATTGAATCATGTAGAGAACATTCCGGAATCATTCGAATCGTTGCAGCAATATTTTGGTTCATATATCTTTCCTCTGTTAGAAGAGATACGGGCTGAGTTGTCTTCAAATTTAAAGAGTATAGCCAGAGCACCTTTTTCAGAAGTGATCTCAGTTGAGGAGTCAAAGCCATATGGAACATTCTCATTCAAAGTTAATATTGGTTCCTTTAGAAACGGATTATACAATCCTGGAAAGGAGCCTTATAGAACAGTACCAGAAGATCTGTTTCTGGTCATGGAATCAAAGCCAGAAAGTGTTATTAATTCAAAATCTTCGATAAAAAATTGGGCTCTTGCTTTGGTTGAAAACGTTCCATACAATGGAGGCTCATCGCCCTTAAGTCTTAAACTCCAAGCCTCAAAGGACATTCGGCCTAAGGACGGCAAAGGAGAAACACTGTTTGTTGTTTTTCTGATGAACTTAACAACCCACTTGAGAATATGGAGATCTTTGCACTTACATGGAAATACAAAGATTATCGAGCAAGTATTGAGCTCAAACTCCATTGGTAATGAAATATGTGGAGAATGCTCTTTAGCTAGCAATGCAGTCTTTGCGGAAATACTGGAAAGAAGATTATCTTCTTTGCTGAATGATTCACAAAAAGAAGCAGTACTAAGTTGTGTCTACAAAACATTCTGCTATCACAAGTCCTCAGTTGATCTGATATGGGGTCCACCTGGAACAGGAAAAACTAAAACTGTTAGTATTTTGCTATGGACCATTTTAGGGATGAACTGCAGGGTTCTTGCTTGCGCGCCTACAAATATTGCAATTACAGAACTGGCTGCTCGGGTTGTGAAGTTGTTAAAGGAATCATATGAAATGAATGATCTCTTTTGTTCATTGGGTGATGTTCTCTTATATGGAAATAAAGATCGACTAAATTTTGGCTCTGAACTTGAAGAAGTACACTTGGATTATCGTGTAGATGTTCTCAGCAAGTGTTTTGGAGCCCAGACTGGATGGAAGCATTGCCTCACTCTGATGATTAAGCTTCTAGATGATTCTATTCTGATGTATAATGCTTTCTTGCAATCTAAGTTAAAGGAGGAGAGTGGTGAAAATGAGGACAAATCATTTCTCGGATTTATGAGGGAACAGTTTAAAAGCAATGCATTAGAGCTCAAAAGATGTCTTACAAATATGTCTACTCATGTTCCTAAACGATTTCTTTTAGATCGGAATTTGCAAAACATGGAGATCCTTGTCAAATTGATTGATGATTTTGAAATCTTTTTATATAAAGATGATCTGGTTTCTGAGGAGCTGCAGCTTCTATTTTCATATCCAGAATCAGTTCCCATCTTTCTGAATTCTTCTTTATATACAGCAGAACTTCCTTATCTGAGAAGGGGATGTCTCTCTGTTATGAAAACCCTTCTGATTTCTCTCGATCAACTTAAGCTTCCTACTACATCAAGCCAAAAATCATTGAAAAATTTCTGTCTCCAGAGAGCCTCCCTTATTCTTTGCACTGTATCTACTTCATATAAACTCTATTCAATCAAAATGGAACCTGTTGATTTGTTACTTATTGATGAAGCAGCACAGTTGAGGGAATGTGAATCAACTATACCCTTACAAATTCCAGGTGTTAGGCATGCTATTCTCATTGGTGATGAGTTCCAGTTACCAGCATATGTTGCCAGTGAGGTTTCTAGTAGAGCTGGCTTTGGTAGAAGCCTTTTTGAGAGGCTGAGTTCATTAGGCCATTCAAAGCACCTTCTCAATACACAGTATAGGATGCACCCATCCATAAGTTGCTTCCCAAATTCCAATTTCTATAACAATCAAATTTTCGATGCACCAACTGTTAAGAGTGAAACACGCTATCTTTCTGGCAAAATGTTTGGTCCGTATTCTTTCATAAATGTTCATGGAGGAAAAGAGGGAAGGGATGATGGTGGAAGCCTGAAAAACATGGTTGAAGTAGCTGTTGTGATCAAAATAATCAAAAAGCTTTATGCAGCATGGAGGAGTTCTTCAAGGAGGAAGCTTAGCATTGGTGTAATATCACCTTATGCTGCACAAGTCATGGCTATTCAAGACAAACTGGGAAGAAGTTACGAGAAGTTTGATGATTTTTCAGTGAAGGTGAAGTCTGTAGATGGTTTCCAAGGTAGCGAGGAGGACGTTATAATAATATCTACTGTCCGCTCCAACAGCAAAGGAAATATCGGATTTCTTTCCAATCCACAGAGAATTAACGTCGCTTTGACAAGAGCTAGGCATAGTCTATGGATTCTAGGAGATGAAAGAACCTTAGGAAGCAGTAACTCTGATTGGAAGGCTGTTGTTCGTAATGCGAAGGCTCGTAAATGTTTCTTTAATGCTGAAGAAGATACTAATTTGGCCAATGCCATAATGGATTCCAAGAAAGAGCTCCTTGAGCTTGATGACTTGCTCAGTAAGGACAGTATACTCTTCAGAAAAGCTCGGTGGAAGGTTCTTTTGAGTGATAACTTTAGGGCATCATTCCAGATCTTGAAATCAATCCAAAAGAAGAAGTCGATCATTATCCTTTTACTAAGGCTTTCCACTGGGTGGCGCCCGAAGAATGACGAAATCTCATTTGTTGAGAGTTCCGATCTCTTGAAACATGTAAAGGTTGAAGGTCTATATGTAGTTTACTCAATTGATATTGAGAAAGATTCAAAGTATATCCAGGTCTTGAAGATATGGGATATTATGCCACTGGATGATGTACAAATGCTGGTTAAATCCCTCTTTGACATATATGGACTTTACACGAAGGAGTTTCTCGATCATTGTGAAGAAAAAAGTCTAGAAGGGGATCTTCAAGTTCCAATTACCTGGAGTGCTTCTAATGAAACTCTCCGTTATAAGGATGAATATGAAAGCATTGCAAGTTCAGAATCTACTGATAGCAGTATTGCTGAGAAGAATCTAAACATGAAAGAGATTCTGCTAAGAATGAAGTTTCAGGCATTATCATATCAAAATGTAAAACAATTGCTTGATGGATGTGATGGCAGACAATTAAACCTTCCTTATGAAATTCCTGACCAACAATTGGAAATAATTTTTCATCCGACGAGCCTCTTTGTAATAGGAAGGCCAGGTACTGAAAAAACCGCTTCTTTGGCTACTAAGCTGTTTCAAAGAGAACAGGATCACCTTCGCCTCCAAGGCAGGCTTGATGAGGTAAGCAACAACAAGATTCAAGGGGCTGTTTTGCGACAACTCTTTGTGACGGTCACTCCTAAACAGTGTGTTGCTGTGAAACAGCATTTTTATTTCTTGAAAAGGATTACATGTGGTGAACGTGTTTCAGAAGGCGAAGTTGTTGATCAATTTGACATGCATGATATTATTGATGGTCCTGCATGGCTCATGGATATTCCGAACAGCTTTGTTAACTTTCCATCAAATTTATATCCGCTTTTCATTACATTTCGGAAGTTTCTTATGATGCTTGATGGAAGTGTTGGGCCTTCTTACTTTGACAAATTCCATAAACTGTGGGAACTTTCTCGAGGAAAATCTAGACTCTCAATGTCAAGTGCCTTGGAAAGTTTTATAAGAACGAAGGAAGTAAACTATGAGAGATTTATTTCATCTTATTGGCCCTATTTCAATAGTCGGCTAACCAAGAATCTTGACGGTTATGTAGTTTTTAATGAGATTACTTCCCAGATTAAAGGTGGCTTACAAGCAGGGGAGTCCCGTGATGGTAAAATCAGTCGGCATGACTATGTTCTACTTTCGAAAGGCCATTCTTCCGTATTGAGCAAGAAGAAGAGAGAGAAGATTTACGAAATATTTCTTGATTACGAGAAGACCAAGATGGAAAAAGGTGAATATGATTTGGCTGATATGGTGATTGATCTTCACCGTAGGTTGAGAGATGATAAGTACACGGGGGAGAAAATGGATTTTGTATATGTGGATGAGGTGCAAGGTCTAACCATGAGACAAATTGCTCTTTTCAAGCGTATATGTGATAATGTTGATTCAGGTTTTGTTTTCTCAAGCAACACAGCTCAAACTATTGCAAGGGGAATTGATTACAGGGTTCGAGACCTGCGGCTTCTGTTCTACAAAGAATTCATTGTAAAAAGGAGAAGTGATCCACATGAAAATGGAACGAGTTTTCAAAATATTAATGCTAATTCCAGAATTCTCCAATTAGCTCAAAGTGTCGTTGAACTCCTCTTTCGGTTCTTTCCTTTTTGTATTGATATATTGTACCCCGAAACAAGTGAGACGAGTGCCGTAAAGGGTGAAACTCCAGTTTTTCTTGAATGTGAGAAATGTGAAACTGCAGTCACAGCTATGTTTGAAAAGAATGTGAAAAATATTGGACTGAGTACTTTTGGATTTGGAGCAGAGCAGATCATTTTAGTTCGAGATGAATGTGAAAGGAAGAAAACTTCTGATCTTATAGGAAACCAAGGTATTGTTCTTACGATCATGGAGTGCCAATGCTTGGAGTTTCAGGATGTCTTATTGTACAACTTCTTCACTTCCTCCCCTTTGGAAAATCATTGGCAAGTGATATATCAATACATGGAAGAGCAAGACATGCTCAAAAGTGCTCCTTCTAGATCCTCTCCAAGCTTCATTCAAGGAAAATTTAATGACTTGTGCTGGGAACTGAAGCTGCTCTATGTGGCAACTACACGTTCGAGGAATAGATTATGGGTTTACGAAGATAATCGGGGGATCTCTAATCCTATCCTTGACTATTGGAAAAAATTGCACCTTATCCAAGCGAGAAGATTGAATTTCTCATATGCACAGGAACTTCAAGTAGCAAATACTAAAGAAGCGTGGAGCTCCCAAGGACTCAAGCTCTTTTCTGAGGGTATTTATGATATGGCATCTAAGTGCTTTCATAGAGCAGAAGACACACAGAAGGAAAAATGGGCTAGGGCTGCTGCTCTTCGCTCTGCTGCTTCCAATTTGCTTGCTTCGAATCTTGAAATGGGTCATTATATCCATCGGGATGCTGCTGAAATATTTAATACTCTCGGTAGGGCCGACCTTGCCGCTAAATGCTTGATTCAGTCGAAGGACTATGAGAAAGCAGGATTTGATATCATCATTCTTAAATGA 5304 38.88 MEGGVIPKKTACKDTKGQMHDHLFSLSLDDILDEHFYEHKESDPNPEDWALNGSTRFIDWRLNHVENIPESFESLQQYFGSYIFPLLEEIRAELSSNLKSIARAPFSEVISVEESKPYGTFSFKVNIGSFRNGLYNPGKEPYRTVPEDLFLVMESKPESVINSKSSIKNWALALVENVPYNGGSSPLSLKLQASKDIRPKDGKGETLFVVFLMNLTTHLRIWRSLHLHGNTKIIEQVLSSNSIGNEICGECSLASNAVFAEILERRLSSLLNDSQKEAVLSCVYKTFCYHKSSVDLIWGPPGTGKTKTVSILLWTILGMNCRVLACAPTNIAITELAARVVKLLKESYEMNDLFCSLGDVLLYGNKDRLNFGSELEEVHLDYRVDVLSKCFGAQTGWKHCLTLMIKLLDDSILMYNAFLQSKLKEESGENEDKSFLGFMREQFKSNALELKRCLTNMSTHVPKRFLLDRNLQNMEILVKLIDDFEIFLYKDDLVSEELQLLFSYPESVPIFLNSSLYTAELPYLRRGCLSVMKTLLISLDQLKLPTTSSQKSLKNFCLQRASLILCTVSTSYKLYSIKMEPVDLLLIDEAAQLRECESTIPLQIPGVRHAILIGDEFQLPAYVASEVSSRAGFGRSLFERLSSLGHSKHLLNTQYRMHPSISCFPNSNFYNNQIFDAPTVKSETRYLSGKMFGPYSFINVHGGKEGRDDGGSLKNMVEVAVVIKIIKKLYAAWRSSSRRKLSIGVISPYAAQVMAIQDKLGRSYEKFDDFSVKVKSVDGFQGSEEDVIIISTVRSNSKGNIGFLSNPQRINVALTRARHSLWILGDERTLGSSNSDWKAVVRNAKARKCFFNAEEDTNLANAIMDSKKELLELDDLLSKDSILFRKARWKVLLSDNFRASFQILKSIQKKKSIIILLLRLSTGWRPKNDEISFVESSDLLKHVKVEGLYVVYSIDIEKDSKYIQVLKIWDIMPLDDVQMLVKSLFDIYGLYTKEFLDHCEEKSLEGDLQVPITWSASNETLRYKDEYESIASSESTDSSIAEKNLNMKEILLRMKFQALSYQNVKQLLDGCDGRQLNLPYEIPDQQLEIIFHPTSLFVIGRPGTEKTASLATKLFQREQDHLRLQGRLDEVSNNKIQGAVLRQLFVTVTPKQCVAVKQHFYFLKRITCGERVSEGEVVDQFDMHDIIDGPAWLMDIPNSFVNFPSNLYPLFITFRKFLMMLDGSVGPSYFDKFHKLWELSRGKSRLSMSSALESFIRTKEVNYERFISSYWPYFNSRLTKNLDGYVVFNEITSQIKGGLQAGESRDGKISRHDYVLLSKGHSSVLSKKKREKIYEIFLDYEKTKMEKGEYDLADMVIDLHRRLRDDKYTGEKMDFVYVDEVQGLTMRQIALFKRICDNVDSGFVFSSNTAQTIARGIDYRVRDLRLLFYKEFIVKRRSDPHENGTSFQNINANSRILQLAQSVVELLFRFFPFCIDILYPETSETSAVKGETPVFLECEKCETAVTAMFEKNVKNIGLSTFGFGAEQIILVRDECERKKTSDLIGNQGIVLTIMECQCLEFQDVLLYNFFTSSPLENHWQVIYQYMEEQDMLKSAPSRSSPSFIQGKFNDLCWELKLLYVATTRSRNRLWVYEDNRGISNPILDYWKKLHLIQARRLNFSYAQELQVANTKEAWSSQGLKLFSEGIYDMASKCFHRAEDTQKEKWARAAALRSAASNLLASNLEMGHYIHRDAAEIFNTLGRADLAAKCLIQSKDYEKAGFDIIILK 1767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5674795 5682038 + Conep19aG0068600.1 Cone19ag0665 459102

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0665 1767 Gene3D - 214 654 IPR027417 -
Cone19ag0665 1767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1081 1636 IPR027417 -
Cone19ag0665 1767 Pfam AAA domain 634 827 IPR041679 -
Cone19ag0665 1767 CDD SF1_C_Upf1 657 845 IPR047187 -
Cone19ag0665 1767 Gene3D - 1317 1352 IPR013986 -
Cone19ag0665 1767 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 269 844 IPR027417 -
Cone19ag0665 1767 Pfam AAA domain 271 392 IPR041677 GO:0004386(InterPro)
Cone19ag0665 1767 Pfam AAA domain 545 626 IPR041677 GO:0004386(InterPro)
Cone19ag0665 1767 PANTHER MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2 620 1760 IPR039904 -
Cone19ag0665 1767 Pfam Domain of unknown function (DUF6469) 105 230 IPR045529 -
Cone19ag0665 1767 Gene3D - 655 865 IPR027417 -
Cone19ag0665 1767 FunFam P-loop containing nucleoside triphosphate hydrolase 655 860 - -
Cone19ag0665 1767 Gene3D - 1353 1403 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0665 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0674 Cone-Chr13:6708834 Cone19ag0665 Cone-Chr19:5674795 0 dispersed
Cone13ag0675 Cone-Chr13:6720059 Cone19ag0665 Cone-Chr19:5674795 0 dispersed
Cone19ag0665 Cone-Chr19:5674795 Cone7ag1580 Cone-Chr7:10823551 7.37E-45 dispersed
Cone13ag0671 Cone-Chr13:6673418 Cone19ag0665 Cone-Chr19:5674795 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1083 . . . . . . . . . . . . . . . . . Bhi07g00157 . . Lac13g1696 . . . . . . . . . . Cone13ag0671 Cone19ag0665 . . . . Chy10g00088 Cme10g01138 . . Bda07g01445 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa05g00953 . .
Vvi8g407 . . . . Bpe04g01311 Bpe03g00975 . Bma10g00360 . . . . . . . . . . . . . . . . . . . . . . . . . . Cone19ag0665 . . . . Blo07g01100 Blo09g00308 Bda03g01448 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008330 1 0 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 2 1 1 2 2 1 2 2 2 1 1 1 0 35