Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag0670 | ATGGCGACATCTTCATCAGCAGGGTTTATGGGAATTATAGAAGAAGATGAAGACAAGATGATGATGATGCAATTACAAAAACATTCCTCTGCATCAAATGCTTCTGCCGCCGCTCCAATTACAACTGCTCCTCCGCCGCCTAAGAAGAAGAGAAATCAACCTGGAACTCCAAATCCAGATGCGGAGGTCATAGCGCTATCGCCCAAAACACTGATGGCAACAAACAGGTTCATATGTGAAGTATGCAGCAAAGGGTTCCAGAGGGAGCAAAACCTACAGCTCCACAGAAGAGGACACAACCTCCCTTGGAAGCTTAAGCAGAAGACAAACAAAGAGCCCAAGCGCAAAGTCTATCTCTGCCCGGAGCCCACTTGTGTCCACCACGACCCCTCTCGGGCTCTCGGGGACCTCACCGGAATCAAAAAGCACTACTCTCGAAAGCACGGCGAGAAGAAATGGAAGTGCGAGAAATGTTCAAAGAGATATGCTGTTCAGTCTGATTGGAAGGCTCATTCTAAGACTTGCGGCACTAGAGAATACAGATGTGATTGTGGTACTCTCTTCTCTAGGCGTGACAGCTTCATCACCCATAGGGCCTTCTGTGATGCACTGGCTCAAGAAAGTGCAAGAAACCCTCCAATAGGAAGCCACCTTTTTGGAGGTAGCAATGTTGGTTTGGGCTTATCTCAAGTTGCTCCTCAAATATCCTCCATACAAGATCATCAAAGCACTCAATCCGGTACCGACGTTCTACGACTTGGCAGTACCGGCCAATTCCATCATCACCTTTTCCCTCCATCACTCGGCTCATCTATATTCCGTCCGCCTCAACCACCGCCCAATATGACTTCGTCGAATTTGTTCTTAAGCAAAACAAACCAAACCGATTACGATGATGATGAAACCGGTCAATCCTCCCACCCGGCTGGAAACAGTTTGTTGCCTAACAAGTCATTTCATGGTCTAATGCAACTCTCTCATGATCATCACATCCAAGCTGCCAACACATCTAGTTCTAATCCTCCATCTATGTTCAACCTAAGCTTCATGTCCAATGCAACAACTCATGATCACGACAATAATAGTAACAGCAGTGATCATAACCCGCCGTCTTCCGGTATGTTAGTTTCCAATCAATTCAACAGTGGAGTGAACGGAAATCGTGGTAATAACGACGGATCGAACATTTTCGGAGTCAACAACATGATGGTAGGGGATCAGATTAGCTCAGGCGCAGTTTCATCTCTCTATAGCACGTCTATCCAGAATAGCAATGCTAGCGCTCTCCCTCACATGTCTGCAACTGCACTACTCCAAAAGGCCGCTCAACTAGGGTCAACCACTTCAACGAACAACAATGCGCCATTTCTTCGTAATTTTGAAGGCTCGTCGGCTGCCGGCTCCAAATCTGACATGCTGTACCCTAATCCAGTGGCTAATAACTTCGAGAGCATTTACGGGGAAAATGATCAGAACCATCTTCAAGACCTAATGAATTACTCCTTGATCAACAGCGGAAACTCGAGTAGTAGTCTCTTCGGAAGTGGGTCCGGAGGGATCAATACATTCTTTAGTGGGCATGATGGGAATAGGTCAAGCATTGAACAGAACCTGGATCAGGAGCCAAAGGTGAGCCAAAACCTTCCAACTCGGAGCGGTAATAGTAGTATTGGAGGGTCAGATAGATTGACAAGGGACTTTCTAGGAGTTGGGGAGATAGTAAGAAGAATAAGTGGAGGGTTTTCTCAAAGGGACCAAAGTCAAACCCAACGTCGGCTACAACAACAACGACGACAACAACATGAGATTGATCAAATAGCCGGATCGTTGGATGAAGGTGGCAGTGCAACGGCAGCGCAGTCAAGCCAGTCATTTGGAGGTGGCGGTGGAAATTTCCATTTGGGAAATGTTTAA | 1914 | 46.71 | MATSSSAGFMGIIEEDEDKMMMMQLQKHSSASNASAAAPITTAPPPPKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCSKGFQREQNLQLHRRGHNLPWKLKQKTNKEPKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARNPPIGSHLFGGSNVGLGLSQVAPQISSIQDHQSTQSGTDVLRLGSTGQFHHHLFPPSLGSSIFRPPQPPPNMTSSNLFLSKTNQTDYDDDETGQSSHPAGNSLLPNKSFHGLMQLSHDHHIQAANTSSSNPPSMFNLSFMSNATTHDHDNNSNSSDHNPPSSGMLVSNQFNSGVNGNRGNNDGSNIFGVNNMMVGDQISSGAVSSLYSTSIQNSNASALPHMSATALLQKAAQLGSTTSTNNNAPFLRNFEGSSAAGSKSDMLYPNPVANNFESIYGENDQNHLQDLMNYSLINSGNSSSSLFGSGSGGINTFFSGHDGNRSSIEQNLDQEPKVSQNLPTRSGNSSIGGSDRLTRDFLGVGEIVRRISGGFSQRDQSQTQRRLQQQRRQQHEIDQIAGSLDEGGSATAAQSSQSFGGGGGNFHLGNV | 637 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 5703595 | 5707740 | - | Conep19aG0069100.1 | Cone19ag0670 | 459107 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag0670 | 637 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 29 | 586 | IPR031140 | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone19ag0670 | 637 | Gene3D | Classic Zinc Finger | 56 | 125 | - | - | |
Cone19ag0670 | 637 | FunFam | protein indeterminate-domain 5, chloroplastic-like | 131 | 210 | - | - | |
Cone19ag0670 | 637 | MobiDBLite | consensus disorder prediction | 579 | 637 | - | - | |
Cone19ag0670 | 637 | Pfam | Zinc finger, C2H2 type | 77 | 99 | IPR013087 | - | |
Cone19ag0670 | 637 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 77 | 99 | IPR013087 | - | |
Cone19ag0670 | 637 | Pfam | BIRD-IDD transcription factor, third C2HC zinc finger | 152 | 176 | - | - | |
Cone19ag0670 | 637 | MobiDBLite | consensus disorder prediction | 333 | 389 | - | - | |
Cone19ag0670 | 637 | FunFam | protein indeterminate-domain 12-like | 56 | 124 | - | - | |
Cone19ag0670 | 637 | Pfam | BIRD-IDD transcription factor, second C2H2 zinc finger | 114 | 148 | - | - | |
Cone19ag0670 | 637 | Pfam | BIRD-IDD transcription factor, fourth C2HC zinc finger | 179 | 212 | - | - | |
Cone19ag0670 | 637 | MobiDBLite | consensus disorder prediction | 614 | 629 | - | - | |
Cone19ag0670 | 637 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 79 | 99 | IPR013087 | - | |
Cone19ag0670 | 637 | MobiDBLite | consensus disorder prediction | 580 | 594 | - | - | |
Cone19ag0670 | 637 | MobiDBLite | consensus disorder prediction | 25 | 39 | - | - | |
Cone19ag0670 | 637 | MobiDBLite | consensus disorder prediction | 540 | 561 | - | - | |
Cone19ag0670 | 637 | MobiDBLite | consensus disorder prediction | 266 | 317 | - | - | |
Cone19ag0670 | 637 | MobiDBLite | consensus disorder prediction | 18 | 62 | - | - | |
Cone19ag0670 | 637 | SMART | c2h2final6 | 153 | 173 | IPR013087 | - | |
Cone19ag0670 | 637 | SMART | c2h2final6 | 118 | 148 | IPR013087 | - | |
Cone19ag0670 | 637 | SMART | c2h2final6 | 77 | 99 | IPR013087 | - | |
Cone19ag0670 | 637 | Gene3D | Classic Zinc Finger | 131 | 210 | - | - | |
Cone19ag0670 | 637 | SUPERFAMILY | beta-beta-alpha zinc fingers | 76 | 173 | IPR036236 | - | |
Cone19ag0670 | 637 | MobiDBLite | consensus disorder prediction | 540 | 563 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone13ag0679 | Cone-Chr13:6757015 | Cone19ag0670 | Cone-Chr19:5703595 | 2.01E-123 | dispersed | |
Cone13ag0680 | Cone-Chr13:6762851 | Cone19ag0670 | Cone-Chr19:5703595 | 0 | dispersed | |
Cone19ag0670 | Cone-Chr19:5703595 | Cone3ag0282 | Cone-Chr3:1468105 | 6.98E-98 | dispersed | |
Cone19ag0669 | Cone-Chr19:5696424 | Cone19ag0670 | Cone-Chr19:5703595 | 1.33E-124 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
45320 | PF13839 | PC-Esterase | 8.80E-101 | CL0264 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag0670 | K25870 | - | vvi:100251079 | 617.461 |