Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0681 ATGCCATTGAAAATTTTGCCCTATGAAATTGTTTTAAGAAAACCCAGTGGGTGGGTAAAAGTCGAATTTTTTTTGATGGGGTGTATATACTCGAAAGGGTCCACAGATGAGGACCATGGAAAAGAGAAGCAATTAAAATCAAATAAATCTTCGAGGCAGTTAGGTGCTTCCTTGAGGAGAGAAGAAGTCATAGTGGATGGAGATGGAGGTGGAAATGAAGCGACTGTTAGGTTAATAGAGAATAGAGTGTCTACTCAAACATCGGATGATGATAATGAAGAGAAAGGCTCAAAGTTACAGATTGAGAAATCGAAGTCTACTATTGAAAGGCCTTCTCTATCTAGGATTTCTAATTTCAGCAATGGAGAAAAAGGGGCACAGGTTGTTGCTGGATGGCCTTCTTGGCTGACCTCTGTAGCTGGAGAAGCCATTAATGGATGGTTGCCTAGAAAGGCAGAGTCTTTTGAGAAGTTGGACAAGATTGGGCAAGGAACATACAGCAGTGTGTATAGAGCACGGGATCTAGAAACAAACAAGATGGTTGCATTGAAGAAGGTCCGATTTGCAAACATGGATCCAGAAAGTGTTCGGTTTATGGCTAGAGAAATAATGATTTTGCGTAGGCTTGACCACCCCAATGTTATGAAGCTTGAAGGCCTAATTACTTCAAGAGTATCTGGCAGCTTATACCTCATTTTCGAGTATATGGAGCATGATCTTTCCGGGCTTGCAGCAAATCCTGCAATCAAACTCACAGAAGCCCAAATTAAGTGCTATATGCGGCAACTACTTCTAGGCCTTGAACATTGTCATACTCAGGGTGTTTTGCATAGAGACATAAAGGGTTCGAATCTTCTGATTGATAATAATGGGAATTTAAAGATTGGGGATTTCGGGCTTGCGACTTCCTTACGGCTTCATCAGAAGCAGCCCCTTACAAGCCGAGTTGTTACTTTGTGGTATAGGCCACCCGAGCTTTTGCTTGGTTCTACAGATTATGGAGTTTCTGTGGATTTGTGGAGTAGCGGTTGCATTCTTGCAGAGTTGCTTGCTGGGAAGTCCATCATGCCAGGAAGAACAGAGGTGGAGCAATTGCACAAGATTTTCAAACTTTGTGGGTCCCCTTCCGAGGAGTACTGGAAAAGATCAAGATTACCTCATGCAACCATGTTTAAACCTCAACATCCTTATAAGCGTTGTGTTTCTGAAACATTTAAGGACTTTCCTTCATCTGCCCTCGCCCTTTTAGACGTTCTTCTTGCTATAGAACCCGACAGTCGTGGAACAGCTTCTTCTTCTCTCCAAAATGAGTTCTTCACTACAAATCCACTTCCATGTGACCCATCAAGTTTGCCAAAGTATCCTCCAAGCAAGGAGTTTGATGCCAAGATTAGAGACGACGAAAGCAGAAGACAAAGAGCAGGTCTGGGAGTAGGACGTGAACATGAAACAGCTAGAAAAGGATTCCGAGAGTCTAAAGCTGTTCCTGCACCAGATGCCAATGCTGAATTGCAAACATCTATACTGAAACGACAAGCCCAAGCTAACCCAAAAAGCGTGAGCGAGAAGTTCAACCCAGAAGATGACGGTGGGTCTGGATTCCCCATAGAACCTCCTAAAGGACTATCATTAAATGTGCACTCCCACTCCGGTCAATCAATGCACCTCTCTGTGTTCGGATCTTCACGAAACATGAACATGAACAAGGGTAAAGAATCCAAAACACAGAGATCTCTCATCCAACGTGGGGCTGCCCAGCTGTCCCGGTTTTCCAATTCGATCACGGCTCAATATGGGTCCCGCCGGTTCGGTATTGGTGGAGGAGGAGATGCTTCTAGTATGAACTCTAACTGGTCCGGTCAGCGTTATAAAAAGGGAAAATACAACCATTTGGATGGAGGCGAGTCAGCTGGAAAGCATGAGTGGTCCCAACATTTTCCGAACAGGGTCAAGTCTAGTAATGTTAAGAGGGATGAGTCCATAGCATCTGGAAAGGAGTCAACAATGAAGAATAGGATACATTACTCGGGCCCACTGATCCCACCTGGCGGAAACCTAGATGAAATGCTGAAGGAGCATGAGAGACAGATCCAGCAAGCTGTATGGAAAGCTCGTGGGGATAAAACAAAGGCTAAAACAGCCTGTAGTGATAACCCACAATACAAATGTTTACTTCACCATTGTAGGAGTGGAAGGTGA 2199 44.16 MPLKILPYEIVLRKPSGWVKVEFFLMGCIYSKGSTDEDHGKEKQLKSNKSSRQLGASLRREEVIVDGDGGGNEATVRLIENRVSTQTSDDDNEEKGSKLQIEKSKSTIERPSLSRISNFSNGEKGAQVVAGWPSWLTSVAGEAINGWLPRKAESFEKLDKIGQGTYSSVYRARDLETNKMVALKKVRFANMDPESVRFMAREIMILRRLDHPNVMKLEGLITSRVSGSLYLIFEYMEHDLSGLAANPAIKLTEAQIKCYMRQLLLGLEHCHTQGVLHRDIKGSNLLIDNNGNLKIGDFGLATSLRLHQKQPLTSRVVTLWYRPPELLLGSTDYGVSVDLWSSGCILAELLAGKSIMPGRTEVEQLHKIFKLCGSPSEEYWKRSRLPHATMFKPQHPYKRCVSETFKDFPSSALALLDVLLAIEPDSRGTASSSLQNEFFTTNPLPCDPSSLPKYPPSKEFDAKIRDDESRRQRAGLGVGREHETARKGFRESKAVPAPDANAELQTSILKRQAQANPKSVSEKFNPEDDGGSGFPIEPPKGLSLNVHSHSGQSMHLSVFGSSRNMNMNKGKESKTQRSLIQRGAAQLSRFSNSITAQYGSRRFGIGGGGDASSMNSNWSGQRYKKGKYNHLDGGESAGKHEWSQHFPNRVKSSNVKRDESIASGKESTMKNRIHYSGPLIPPGGNLDEMLKEHERQIQQAVWKARGDKTKAKTACSDNPQYKCLLHHCRSGR 732
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 5761303 5766108 - Conep19aG0070200.1 Cone19ag0681 459118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0681 732 MobiDBLite consensus disorder prediction 35 54 - -
Cone19ag0681 732 Gene3D Transferase(Phosphotransferase) domain 1 238 477 - -
Cone19ag0681 732 Gene3D Phosphorylase Kinase; domain 1 142 237 - -
Cone19ag0681 732 MobiDBLite consensus disorder prediction 82 106 - -
Cone19ag0681 732 PANTHER CELL DIVISION PROTEIN KINASE 154 439 IPR050108 GO:0000307(PANTHER)|GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0006468(PANTHER)|GO:0008353(PANTHER)|GO:0032968(PANTHER)|GO:0070816(PANTHER)
Cone19ag0681 732 ProSiteProfiles Protein kinase domain profile. 155 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0681 732 MobiDBLite consensus disorder prediction 84 106 - -
Cone19ag0681 732 MobiDBLite consensus disorder prediction 458 493 - -
Cone19ag0681 732 MobiDBLite consensus disorder prediction 445 541 - -
Cone19ag0681 732 FunFam probable serine/threonine-protein kinase At1g54610 238 478 - -
Cone19ag0681 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 275 287 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0681 732 ProSitePatterns Protein kinases ATP-binding region signature. 161 184 IPR017441 GO:0005524(InterPro)
Cone19ag0681 732 SMART serkin_6 155 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0681 732 MobiDBLite consensus disorder prediction 505 521 - -
Cone19ag0681 732 SUPERFAMILY Protein kinase-like (PK-like) 150 447 IPR011009 -
Cone19ag0681 732 CDD STKc_CDK9_like 155 439 - -
Cone19ag0681 732 FunFam probable serine/threonine-protein kinase At1g54610 142 237 - -
Cone19ag0681 732 Pfam Protein kinase domain 155 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1063 Cone-Chr14:8962512 Cone19ag0681 Cone-Chr19:5761303 1.90E-222 dispersed
Cone19ag0681 Cone-Chr19:5761303 Cone9ag0171 Cone-Chr9:760275 1.75E-230 dispersed
Cone13ag0687 Cone-Chr13:6806189 Cone19ag0681 Cone-Chr19:5761303 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82387 PF00226 DnaJ 3.70E-12 CL0392 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0681 - - - 0.0