Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone19ag0731 | ATGTCGTCGCAATCCTCTCCTACTTCCACGGCGGCGTCTGACCAGCACGCGCCGCTCCTCCGCTCACGCCAATCCTCTTCCTCCTCTGATGGTCCAAGCTCCTCAGCTCCTCCCGCCACCCTTGCACTCCTCCTGGGCCGGGCCTCAGGACGCCGCGGCCCATCCATCTTGGTCCGAGAAACAGCGGCACGGCAGCTGGAGGAGAGGCGAGCGGACTGGGCCTATTCTAAGCCGGTGGTGGCTCTCGACATGATGTGGAACACAGCTTTCGTAGTCGTTTCGATCGGTATGCTTATTTCCACTGTTAATGAGCAGCCTGACACACCGATTCGGCTCTGGATCTGTGGCTATGCGTTACAGTGTTTGGTCCACGTGGTACTCGTCTGGATTGAGTACAGGAGGAGGAGCGTGAGAAGGACTCGGGATTTGGAGGGCCCGCAGCAAGGTGGAGATGATAATGGCGGTGCTGTTGCTGCTCCTTCTAATGACAGTGAGGATGATGATATGAACTCAAGGGTTTTGTCTAGTTCGAGCCAGTCCAGCATTACTAAACGATGCGAGTCCATAAACACAATGGCATCGTTTCTCTGGTGGATAGTCGGCTTTTACTGGGTACTCTCAGGTGGAGATAGCCTTATGATAAACGCTCCTCATTTATACTGGTTGGCTGTAATCTTTCTAGCATTTGATGTATTCTTCGCCTTATTCTGTGTCGTTTTGGCATGTCTAATCGGGATCGCTCTCTGTTGCTGCTTGCCTTGCATCATTGCCATTCTATATGCTGTTGCTGGTCAGGAAGGTGCATCGGAAGCGGATCTAAGTGCCCTTCCTAAATATAGATTCAAGACATCTAACAACGAAGAGAAGCCCAGTGTGGGGGCTGGGACTATGATTCCTGTTGAAACGAGCAGTGGGTACTTGGCAACCGAACAAGTACTTCTAAACGAGGATGCAGAGTGCTGTATCTGCCTGAGCTCATATGAAGATGGAGCAGAGCTCCATGCTCTTCCCTGCAACCATCACTTCCATTCTTCCTGTATTGTTAAATGGCTCAAGATGAATGCCACGTGTCCTCTCTGCAAGTATAACATTCTCAAGGGATTCGAGCAGGTATAG | 1116 | 51.43 | MSSQSSPTSTAASDQHAPLLRSRQSSSSSDGPSSSAPPATLALLLGRASGRRGPSILVRETAARQLEERRADWAYSKPVVALDMMWNTAFVVVSIGMLISTVNEQPDTPIRLWICGYALQCLVHVVLVWIEYRRRSVRRTRDLEGPQQGGDDNGGAVAAPSNDSEDDDMNSRVLSSSSQSSITKRCESINTMASFLWWIVGFYWVLSGGDSLMINAPHLYWLAVIFLAFDVFFALFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSALPKYRFKTSNNEEKPSVGAGTMIPVETSSGYLATEQVLLNEDAECCICLSSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKYNILKGFEQV | 371 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
19 | 6018946 | 6020992 | - | Conep19aG0075200.1 | Cone19ag0731 | 459168 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone19ag0731 | 371 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Cone19ag0731 | 371 | SUPERFAMILY | RING/U-box | 307 | 366 | - | - | |
Cone19ag0731 | 371 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Cone19ag0731 | 371 | ProSiteProfiles | Zinc finger RING-type profile. | 320 | 361 | IPR001841 | - | |
Cone19ag0731 | 371 | SMART | ring_2 | 320 | 360 | IPR001841 | - | |
Cone19ag0731 | 371 | Pfam | Ring finger domain | 319 | 361 | IPR001841 | - | |
Cone19ag0731 | 371 | MobiDBLite | consensus disorder prediction | 141 | 176 | - | - | |
Cone19ag0731 | 371 | CDD | RING-H2_PA-TM-RING | 319 | 361 | - | - | |
Cone19ag0731 | 371 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 298 | 367 | IPR013083 | - | |
Cone19ag0731 | 371 | PANTHER | TARGET OF ERK KINASE MPK-1 | 44 | 364 | - | GO:0000325(PANTHER)|GO:0006511(PANTHER)|GO:0016567(PANTHER)|GO:0061630(PANTHER) | |
Cone19ag0731 | 371 | FunFam | E3 ubiquitin protein ligase RIE1 | 300 | 368 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone18ag1101 | Cone-Chr18:8039895 | Cone19ag0731 | Cone-Chr19:6018946 | 7.14E-100 | dispersed | |
Cone19ag0604 | Cone-Chr19:5329125 | Cone19ag0731 | Cone-Chr19:6018946 | 2.28E-90 | dispersed | |
Cone19ag0731 | Cone-Chr19:6018946 | Cone9ag0760 | Cone-Chr9:3637166 | 9.46E-118 | dispersed | |
Cone13ag0728 | Cone-Chr13:7016575 | Cone19ag0731 | Cone-Chr19:6018946 | 1.93E-211 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone19ag0731 | - | - | - | 0.0 |