Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0747 ATGAAAAGAGAGCATTATCATCTCGATCCTTATCCACCTGCCGACGGCAGCGGAAGCGGTGGAATCAGCAAGGAGAAGCTGTGGGAGATGGATGCAGCAGCGCGGCGAGACGGCGGGATGGACGAGCTACTCGCCGTGTTGGGTTACAAAGTGAAGGCATCGGACATGGCGGAAGTAGCTCAGAAACTAGAGCAGCTTGAAGAATTCATGGGGCATGTGCAAGATGGATTGACTCAGCTCGCTACGGATACTGTTCATTACAATCCGTCTGATCTATCGACCTGGCTCGAAAGTATGCTCTCTGAGCTCAACGCGCCGCCTGATCTCAACCCACTCGTCGCCACCCCTCCACCCCAATCTACCGCCTCGTCCTCCACTATTACCTCCATAGACTACTCCGACCAATCCGGCCTTGAACTAATCCCTGGAAACGCCATTTACAACAACCACAATTATAACAATAAGGGCTTGAAATTACTTGATGATTCTGACAGCTTGTTCTCCCCTCTTCCGGATTCTTCCGCTTCTCGTCCGGTAGTTCTCGTCGATTCGCAGGAGAACGGGATTCAGTTAGTCCACTCTCTGTTAGCTTGCGCTGAGGCGGTGCAGCAGAACAATCTCCACCTCGCAGAAGCGCTAGTGAAGCGGATCGGATTCTTAGCGGTTACTCAGGCCGGAGCTATGGGTAAGGTCGCGACCTTCTTTGCGGAAGCGTTGGCTAGGAGGATATACGGATTATTTCCCCAGAATCCGTTGGTCGATAATTTCTCGATTCTTCAAATGCATTTCTACGAGAGCTGTCCGTATCTGAAATTCGCTCATTTCACGGCGAATCAAGCGATTCTCGAAGCGTTTGAAGGTAAGAATCGCGTTCATGTTATTGATTTCTCTATGAATCAAGGTATGCAGTGGCCGGCTTTGATGCAAGCGTTAGCCCTACGTCCTGGCGGTCCGCCGGCTTTTCGGTTAACCGGAATCGGACCGCCGGCTCCGGATAACTCGGACCATTTGCAGGAAGTCGGGTGGAAGCTGGCTCAGTTAGCGGAGACGATTCACGTCGAGTTCGAGTACCGAGGCTTCGTGGCTAACAGCTTGGCCGATCTTGATGCTTTCATGCTTAAACTCCGGCCAAGTGAGATCGAGTCGGTGGCGGTTAACTCGGTTTTCGAGCTGCATAAGCTGTTGGCTCGTCCGGGAGCGGTTGAGAAGGTTTTGTCCGTGGTGAAGAAGATGAAGCCGGATATCATGACGGTTGTTGAGCAAGAAGCGAACCATAACGGTCCCGTTTTTCTCGACCGGTTTACCGAGTCGCTTCACTACTACTCGACTCTGTTCGACTCGTTGGAGAGTTCGGTGAATAATCAGGACAAGGTTATGTCGGAAATATATTTGGGGAAGCAGATTTGCAACGTGGTGGCGTGTGAGGGCGTGGACCGGGTCGAGCGGCACGAGACGCTGACTCAGTGGCGGACTCGGCTTGACTCTTCCGGATTCGCCCTGGTTCACCTCGGGTCCAACGCGTTTAAGCAGGCCAGTATGCTGTTGGCTTTGTTTGGGAGTGGGGATGGGTATAGAGTGGAGGAAAACGACGGGTGTTTGATGCTGGGTTGGCACACTCGGCCACTCATCGCCACATCGGCCTGGCAACTCGGTGACCGACCGGCGGTTGCTTACTGA 1677 53.01 MKREHYHLDPYPPADGSGSGGISKEKLWEMDAAARRDGGMDELLAVLGYKVKASDMAEVAQKLEQLEEFMGHVQDGLTQLATDTVHYNPSDLSTWLESMLSELNAPPDLNPLVATPPPQSTASSSTITSIDYSDQSGLELIPGNAIYNNHNYNNKGLKLLDDSDSLFSPLPDSSASRPVVLVDSQENGIQLVHSLLACAEAVQQNNLHLAEALVKRIGFLAVTQAGAMGKVATFFAEALARRIYGLFPQNPLVDNFSILQMHFYESCPYLKFAHFTANQAILEAFEGKNRVHVIDFSMNQGMQWPALMQALALRPGGPPAFRLTGIGPPAPDNSDHLQEVGWKLAQLAETIHVEFEYRGFVANSLADLDAFMLKLRPSEIESVAVNSVFELHKLLARPGAVEKVLSVVKKMKPDIMTVVEQEANHNGPVFLDRFTESLHYYSTLFDSLESSVNNQDKVMSEIYLGKQICNVVACEGVDRVERHETLTQWRTRLDSSGFALVHLGSNAFKQASMLLALFGSGDGYRVEENDGCLMLGWHTRPLIATSAWQLGDRPAVAY 558
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6093751 6096303 - Conep19aG0076800.1 Cone19ag0747 459184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0747 558 Pfam GRAS domain family 191 549 IPR005202 -
Cone19ag0747 558 ProSiteProfiles GRAS family profile. 182 549 IPR005202 -
Cone19ag0747 558 FunFam DELLA protein GAI 39 103 - -
Cone19ag0747 558 Pfam Transcriptional regulator DELLA protein N terminal 41 107 IPR021914 -
Cone19ag0747 558 SMART DELLA_2 41 113 - -
Cone19ag0747 558 MobiDBLite consensus disorder prediction 1 23 - -
Cone19ag0747 558 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 168 548 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009723(PANTHER)|GO:0009737(PANTHER)|GO:0009863(PANTHER)|GO:0009867(PANTHER)|GO:0009938(PANTHER)|GO:0010187(PANTHER)|GO:0042538(PANTHER)|GO:0043565(PANTHER)|GO:2000033(PANTHER)|GO:2000377(PANTHER)
Cone19ag0747 558 Gene3D - 39 103 IPR038088 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone16ag0528 Cone-Chr16:7324283 Cone19ag0747 Cone-Chr19:6093751 2.14E-212 dispersed
Cone16ag1013 Cone-Chr16:9837920 Cone19ag0747 Cone-Chr19:6093751 6.67E-92 dispersed
Cone19ag0747 Cone-Chr19:6093751 Cone6ag0390 Cone-Chr6:1896382 5.69E-267 dispersed
Cone13ag0741 Cone-Chr13:7068584 Cone19ag0747 Cone-Chr19:6093751 0 wgd
Cone19ag0747 Cone-Chr19:6093751 Cone9ag0417 Cone-Chr9:1924848 4.81E-266 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45327 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0747 K14494 - csv:101204164 796.578