Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0750 ATGACCAAGTCCAACTCATTTCTTCAGAATCTAATGAAACCCTTCAAAATCGGCTCAACCAGAGGAGAGGGCCAAAATGATGAAGATTTGGAGAGGATTGCTGCGCAGGAACAGAAAGTCTTTGCTTATGAAACCCTAGTTGCAGCTACTAAAGATTTTCATCCCAATCACAAGCTTGGAGAAGGTGGGTTCGGACCCGTTTTCAAGGGTAAGTTATTAGATGGAAGAGAGATTGCGGTAAAGAAGTTATCACAATTTTCAAGGCAAGGGAAGAAAGAGTTTATGAACGAGGCGAAGTTATTGTGTCGAGTGCAGCACCGGAATATCGTGAATCTCTTGGGATATTGTGTCCATGGAGTCGAGAAGCTACTCGTCTATGAATATGTCACTAATGAAAGCGTTGACAAGTTCCTCTTTAAACAAAATAGGCGACAGGAGCTTGACTGGAAACGTAGATACGACATAATATGCGGAGTTGCAAGGGGCTTGCTTTATCTTCATGAAGACTCGCACAATCCCATCATCCACCGTGACATCAAGGCTAGCAACATTTTGCTAGATAACAAGTGGGCCCCGAAAATCGCTGATTTTGGCTTGGCCCGCCTCTTCCCTGAAGATGAGACGCATGTCAACACCCGAGTGGCTGGTACCAATGGCTATATGGCTCCCGAATATATCATGCATGGATACTTATCAGTCAAAGCTGATGTTTTTAGCTTTGGAGTCGTGGTTCTGGAACTGATAAGCGGTCAGAGAAACTCTTCCTTCAGTTCACACGAAGATGAACAGAATCTGCTTGATTGGGCATACAAGCTGTACAAGAAAGGCAAAAGCTTGGAGATTATGGACACGAAATTGGCACAATCGGCTCAGACTGAACAGGTAGCATCGTGCATACAGATAGGACTGCTTTGTGCACAGGGCAACCCGCATCAACGGCCCACCATGGGACGAGTTGTTGTTATGTTGTCGAAGAAACCTAGCCATTTAGATGAACCGGGTAGGCCGGGGATACCTGGCTCGAGATATAGAAGGGCTCGGAGAGCGCCAACTCAGAGCTCTAGTGCTGGAAGCTCGGGTGAGTCTTATTACAATACCACGTCTGATTTTAGCAGCACCAATACTAACACCGCAACTGCAACCGCAACCGCAACCGCAACAGGGACAAGCTCGACTGGCCGTGGGATAGATACTCGTGGGAAGCAGCCCGTAGAAAGTTAG 1221 46.76 MTKSNSFLQNLMKPFKIGSTRGEGQNDEDLERIAAQEQKVFAYETLVAATKDFHPNHKLGEGGFGPVFKGKLLDGREIAVKKLSQFSRQGKKEFMNEAKLLCRVQHRNIVNLLGYCVHGVEKLLVYEYVTNESVDKFLFKQNRRQELDWKRRYDIICGVARGLLYLHEDSHNPIIHRDIKASNILLDNKWAPKIADFGLARLFPEDETHVNTRVAGTNGYMAPEYIMHGYLSVKADVFSFGVVVLELISGQRNSSFSSHEDEQNLLDWAYKLYKKGKSLEIMDTKLAQSAQTEQVASCIQIGLLCAQGNPHQRPTMGRVVVMLSKKPSHLDEPGRPGIPGSRYRRARRAPTQSSSAGSSGESYYNTTSDFSSTNTNTATATATATATGTSSTGRGIDTRGKQPVES 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6126358 6128895 + Conep19aG0077100.1 Cone19ag0750 459187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0750 406 Pfam Protein tyrosine and serine/threonine kinase 56 321 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0750 406 SUPERFAMILY Protein kinase-like (PK-like) 38 337 IPR011009 -
Cone19ag0750 406 CDD STKc_IRAK 59 325 - -
Cone19ag0750 406 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0750 406 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 34 357 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Cone19ag0750 406 MobiDBLite consensus disorder prediction 325 406 - -
Cone19ag0750 406 FunFam Cysteine-rich receptor-like protein kinase 10 130 335 - -
Cone19ag0750 406 ProSiteProfiles Protein kinase domain profile. 53 330 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0750 406 Gene3D Transferase(Phosphotransferase) domain 1 129 332 - -
Cone19ag0750 406 Gene3D Phosphorylase Kinase; domain 1 18 128 - -
Cone19ag0750 406 MobiDBLite consensus disorder prediction 347 397 - -
Cone19ag0750 406 FunFam Cysteine-rich receptor-like protein kinase 10 17 128 - -
Cone19ag0750 406 SMART serkin_6 53 323 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0750 Cone-Chr19:6126358 Cone6ag0386 Cone-Chr6:1878713 1.90E-148 dispersed
Cone13ag0744 Cone-Chr13:7090410 Cone19ag0750 Cone-Chr19:6126358 5.11E-233 wgd
Cone19ag0750 Cone-Chr19:6126358 Cone9ag0413 Cone-Chr9:1912445 4.34E-153 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82390 PF16187 Peptidase_M16_M 3.30E-101 CL0094 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0750 - - - 0.0