Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0762 ATGAGTCCGCGGACTACATCAAACTCGAGCAAACCCCTTGAAGGCATCCACGGGGTGCACGTCATTCCCCATCCAAAATTTGGATTGAAGGACAATACTACTCGATATGGCGACTTGTCTCAGTCAGATGTTAGGACTTCTGTTGGACCAAATCACCGGCTTATAATGCAATGGGTGTGGGAGCAAAGACCGGCCTGCTTGAAGCCCATAGGAGGTTGTATGCAAGGTGATCAGAATCTGGCTGTAACAGTTGTAAACGTGCTTACTTCACTTCCATTTATTGCTCTTGGAATCCAAACTCCAAGGAAAAACCTGCCTACTAGGCTATATGCAGATTCATTGATTGGAGTAGGAGTTGCCTCGACTTTATATCATTCTTCTAGAGGAAAATTAAGAAAATACTTGAGATGGGCCGACTATACAATGATAGCCACTTCCACTGTAAAAGCTTTTAATGGCGGCATCGGCATTCCTTCTACCTCTCCAGCCTCTAATGGTTTCTGCTGTTCACACTGGGATGATGGAGGTAGTGTTTGCCAAAAGAGCGATGAAAAATCCAGACCTAAGGACGGCCCACAACGTGCATAA 588 45.41 MSPRTTSNSSKPLEGIHGVHVIPHPKFGLKDNTTRYGDLSQSDVRTSVGPNHRLIMQWVWEQRPACLKPIGGCMQGDQNLAVTVVNVLTSLPFIALGIQTPRKNLPTRLYADSLIGVGVASTLYHSSRGKLRKYLRWADYTMIATSTVKAFNGGIGIPSTSPASNGFCCSHWDDGGSVCQKSDEKSRPKDGPQRA 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6205811 6207874 + Conep19aG0078300.1 Cone19ag0762 459199

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0762 195 PANTHER FOLD PROTEIN 1 148 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0762 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0758 Cone-Chr13:7164452 Cone19ag0762 Cone-Chr19:6205811 1.14E-28 wgd
Cone19ag0762 Cone-Chr19:6205811 Cone6ag0393 Cone-Chr6:1907214 2.37E-62 wgd
Cone19ag0762 Cone-Chr19:6205811 Cone9ag0419 Cone-Chr9:1932780 1.80E-17 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g436 Blo01g00756 . . . . . . . . . . . . . . . Cpe01g01847 . . . . . . . . . . . . . . Cone13ag0758 Cone19ag0762 Cone6ag0393 Cone9ag0419 . Csa05g02021 . . . . . . . . . . . . Cmo15g00997 . Cma15g00958 . Car15g00902 Cpe13g00367 . Bhi12g00907 . . . . . . Cla01g00611 Cam01g0639 Cec01g0631 Cco01g0658 Clacu01g0629 Cmu01g0602 Cre09g1900 Lsi09g00662 . Chy09g00515 Cme09g01382
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006606 1 2 1 1 1 1 2 1 1 1 1 1 2 1 1 2 1 4 2 1 1 1 1 1 1 1 1 1 1 1 38