Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0767 ATGGAAGGTTTTCGTCGCTGGTTTCACCGCCTCTCTGCTACTTCTTCTACTGATTTCGCGGTTAATGACATCGATACTGTTACTGCTACTACCACTACCACTACCACTACTGGCAGCAGTGACGTTCGAAACGGGAGTCCTTCGAACGCCGTCAGATCAGACGAGCTGGAGATCAATGTTGATTTCGATATTTCAGGATTGAAGCCTATCGTGGTCCCTAAAAGGAACGATCATAGTAAGATCGCATCCATGGGTCCTCCTCAAAAGAACATGCTTGACAAAGAATTTTTCACAGAATATGGCGAGGCAAGCCAATACGAAATCTACCAAGTAATAGGGAAAGGCAGCTATGGAGTTGTTGCATCAGCCATAGACACTCATTCAGGCGAGAAAGTAGCTATTAAGAAAATAAATGATGTCTTTGAGCATGTTTCTGATGCGACAAGAATCCTCAGAGAAATCAAGCTCCTTAGGCTGCTACATCACCCTGACATTGTTCAAATCAGACACATAATGCTTCCTCCATCTAGAAGAGAATTTGAAGATATCTATGTTGTGTTTGAGTTGATGGAATCTGATCTTCACCAAGTCATTAAGGCAAATCATGACCTCACTCCTGGACATTTTCAGTTCTTCTTGTATCAGCTTCTTCGTGCTTTGAAATATATACATGCAGCAAATGTATTCCACAGAGATTTAAAGCCGAAAAACATACTGGCTAATTCCGACTGCAAATTGAAGATATGTGATTTTGGGCTTGCTCGTGCAGCATTTGATGATGCTCCGTCTACCGTTTTCTGGACTGATTATGTGGCAACTAGATGGTACCGTGCTCCTGAACTCTGTGGTTCCTTCTTCTCCAAGTACACACCTGCTATTGACATTTGGAGCATAGGATGTATATTTGCAGAAATGCTGACCGGAAAACCCCTGTTTCCCGGAAAAACAGTTGTCCATCAACTTGACCTGATCACAGATTTTCTTGGCACCCCTTCTCCTGAATCCATTGCTAAGATTCGGAATGAAAAGGCTAAGAGGTATTTGAATAGTATGAGGCAAAAGAAACCTATTCCTCTCTCGGAAAAGTTCCCCAATGCAGAGCCATTGGCTCTTCGTTTACTTGAACGCCTGCTTGCATTTGACCCGAAAGACCGTCCATCAGCGGAAGAGGCATTAGCTGATCCATATTTCCGTGGATTGGCGAATGTGGACCATGAACCATCCACACAACCGATATCAAAAATGGAGTTCGAGTTTGAGAGAAGGCAGTTGAAAAAAGATGACGTCCGAGAGCTTATCTATAGAGAGATTCTAGAGTATCATCCTCAGATGCTAGAAGAGTACCTTGAGGGATCAGAGTGCTCATTCATGTATCCAAGTGGGGTTGATCGGTTTAAGCGTCAATTTGCTCATCTTGTGGAAAACAATCATGTGAAAGGGGAAAGAAGCGCTCTACTTCAGAGAAAGCATGCCTCCTTGCCCAGGGAGCGAGTTTGTGTGCCAAAAGAAGAGGAAGCGGAACAAAGCAGTCACTGTGAAGAGTGCTAG 1548 43.73 MEGFRRWFHRLSATSSTDFAVNDIDTVTATTTTTTTTGSSDVRNGSPSNAVRSDELEINVDFDISGLKPIVVPKRNDHSKIASMGPPQKNMLDKEFFTEYGEASQYEIYQVIGKGSYGVVASAIDTHSGEKVAIKKINDVFEHVSDATRILREIKLLRLLHHPDIVQIRHIMLPPSRREFEDIYVVFELMESDLHQVIKANHDLTPGHFQFFLYQLLRALKYIHAANVFHRDLKPKNILANSDCKLKICDFGLARAAFDDAPSTVFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKTVVHQLDLITDFLGTPSPESIAKIRNEKAKRYLNSMRQKKPIPLSEKFPNAEPLALRLLERLLAFDPKDRPSAEEALADPYFRGLANVDHEPSTQPISKMEFEFERRQLKKDDVRELIYREILEYHPQMLEEYLEGSECSFMYPSGVDRFKRQFAHLVENNHVKGERSALLQRKHASLPRERVCVPKEEEAEQSSHCEEC 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6232714 6235849 + Conep19aG0078900.1 Cone19ag0767 459204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0767 515 Pfam Protein kinase domain 106 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0767 515 FunFam Mitogen-activated protein kinase 93 199 - -
Cone19ag0767 515 ProSitePatterns MAP kinase signature. 141 244 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0767 515 SUPERFAMILY Protein kinase-like (PK-like) 102 402 IPR011009 -
Cone19ag0767 515 Gene3D Phosphorylase Kinase; domain 1 122 443 - -
Cone19ag0767 515 FunFam Mitogen-activated protein kinase 192 420 - -
Cone19ag0767 515 SMART serkin_6 106 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0767 515 ProSiteProfiles Protein kinase domain profile. 106 397 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0767 515 CDD STKc_TDY_MAPK 105 442 - -
Cone19ag0767 515 Gene3D Transferase(Phosphotransferase) domain 1 192 420 - -
Cone19ag0767 515 ProSitePatterns Protein kinases ATP-binding region signature. 112 136 IPR017441 GO:0005524(InterPro)
Cone19ag0767 515 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 103 438 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0323 Cone-Chr13:2685649 Cone19ag0767 Cone-Chr19:6232714 3.34E-261 dispersed
Cone19ag0767 Cone-Chr19:6232714 Cone2ag0757 Cone-Chr2:33377398 8.70E-251 dispersed
Cone13ag0763 Cone-Chr13:7194257 Cone19ag0767 Cone-Chr19:6232714 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82391 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0767 - - - 0.0