Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0808 ATGGAGGCTTTCACTCTGCTTTTCCTTCTTCTCTTCTTCCTCTGCAACTCTTACAATCCGGCCGCTTCTTTAAACGGCGAAGGCCAAACGCTCTTACTTTTCAAGCAGTCAATCAAAGAAGACCCAAACGGGTGTCTAAGCAACTGGAACTCTTCCGATGAAACGCCATGTTTATGGAACGGAATCACATGCAGTAATCAAAGAGTTGTCTCTCTCAGCATTCCGAAGAAGAAACTAAACGGGTTTCTTCATCCTTCTCTTGGATCTCTCTCTGACCTCCGCCATGTAAATTTGAGGAGCAACAAGCTTTACGGGACCTTGCCATCAAAGCTGTTTGAAGCTCAGGGATTACAGAGCTTAGTCCTTTTCGGTAATTTCTTGTCTGGGTCCTTGCCTAATGAAATTGGGAAGCTTACTTATCTTCAAACCTTGGATTTATCGCAAAATTTCTTCAATGGGTCGTTACCCAGTTCGATTACTCAATGTAGAAGGCTCAAAGCTCTTGATCTTGGTGAAAATAATTTCACTGGTTTTCTGCCAAATGGGTTTGGTGGTAGCTTCAATCTTCTGACAAAACTTGATATTTCTTTTAATATGTTTGGTGGTTCAATTCCTATTGATATAGGGAACCTATCTAGTTTACGAGGTACTGTTGATTTGTCGCATAATCGATTTTCGGGTTCGATCCCGGCTAGTGTTGGAAACCTTCCTGAAAAGGTTTACATTGATCTTACGTACAATAATTTAAGTGGTCCCATACCTCAAAATGGCGCTCTTATGAACAGAGGGCCAACTGCATTTATAGGAAACCCTGGACTCTGTGGACCTCCATTGAAGAACCCATGTTCTTCGGAAAATCCCAGCGCAAGCTCACCTTCCTCCATTCCTTACCTACCCGATAACTCTCCACCTGATAATTCTAATGAGAATAGTCGAAAGGGTGATAAAGCAAGAGGGTTAAGTAAAAGTTCTGTCATTGCAATTGTTCTTAGCGATGTTATTGGTATATGCCTAATCGGGTTGTTATTCTCGTATTGTTACTCAATGGTGTGTACTGATAGCAAGAGTAAAGATGAAACTGGATATGGTTTTGAAAAGGGAGGAAGAAAGGGTAGGAAGGAGTGTTTGTGCTTTAGAAAAGATGAATCGGAGTCTCTTTCCGAAAATGTGGAGCAATATGATCTTGTGGCATTGGACAAGCAAGTGGCATTTGATCTTGATGAGCTTCTTAAGGCGTCAGCTTTTGTTTTAGGGAAAAGTGGGATTGGGATTGTTTACAAGGTTGTGCTTGAAGATGGACTTACCTTGGCGGTGAGAAGGTTAGGCGAAGGTGGTTCTCAAAGGTGTAAGGAATTTCAAACGGAAGTAGAGGCGATTGGAAAGCTTCAGCATCCGAATATTGTAACTCTTCGAGCTTATTATTGGTCGGTTGATGAGAAGCTTCTCATATATGATTATATCCCTAATGGAAACCTTGCCACTGCAATTCACGGAAAGCCCGGATTGGAATCATTTAGGCCATTACCATGGTCGGTTCGGTTAAAAGTCATGAAAGGCGTTGCAAAAGGATTGTCATATCTGCACGAATTTAGCCCCAAAAAATATGTTCATGGCGACTTGAAGCCTAGCAACATACTTCTTGGACCGAACATGGACCCCCACATTTCCGATTTTGGCCTTGGTCGACTTGCTAACATAGCAGGTGGGTCCCCCACCCTACAATCTGATCATGTTGAAAAACCACAAGAAAGACAGCAAAAGACTACATGCTCCGAACTTGATTCGAAGCTTACTTTGTTGGATGATGTAGGATCATGCTATCAGGCCCCGGAATCGATGAAAGTGGTGAAGCCATCTCAAAAGTGGGATGTTTATGCATTTGGTGTGATCTTATTAGAAATGATAACAGGAAGATTACCTGTCATCCAGGTAGGCTCGTCTGAAATGGATATTGTACATTGGATTCAGCTTTGTATTGAAGAGAAGAAGCCGCTTTCGGATGTTTTGGACCCATATTTGGCCCAAGATGCAGATGTGAACGTGGATGAGGAGATTATTTCAGTTTTAAGGATTGCTATGGCATGTGTTAGTACTAGTCCCGAAAGGAGATTACCTATGAGGCATGTATGTGATGCGTTGCACAGGATAGTCATTTGA 2157 42.23 MEAFTLLFLLLFFLCNSYNPAASLNGEGQTLLLFKQSIKEDPNGCLSNWNSSDETPCLWNGITCSNQRVVSLSIPKKKLNGFLHPSLGSLSDLRHVNLRSNKLYGTLPSKLFEAQGLQSLVLFGNFLSGSLPNEIGKLTYLQTLDLSQNFFNGSLPSSITQCRRLKALDLGENNFTGFLPNGFGGSFNLLTKLDISFNMFGGSIPIDIGNLSSLRGTVDLSHNRFSGSIPASVGNLPEKVYIDLTYNNLSGPIPQNGALMNRGPTAFIGNPGLCGPPLKNPCSSENPSASSPSSIPYLPDNSPPDNSNENSRKGDKARGLSKSSVIAIVLSDVIGICLIGLLFSYCYSMVCTDSKSKDETGYGFEKGGRKGRKECLCFRKDESESLSENVEQYDLVALDKQVAFDLDELLKASAFVLGKSGIGIVYKVVLEDGLTLAVRRLGEGGSQRCKEFQTEVEAIGKLQHPNIVTLRAYYWSVDEKLLIYDYIPNGNLATAIHGKPGLESFRPLPWSVRLKVMKGVAKGLSYLHEFSPKKYVHGDLKPSNILLGPNMDPHISDFGLGRLANIAGGSPTLQSDHVEKPQERQQKTTCSELDSKLTLLDDVGSCYQAPESMKVVKPSQKWDVYAFGVILLEMITGRLPVIQVGSSEMDIVHWIQLCIEEKKPLSDVLDPYLAQDADVNVDEEIISVLRIAMACVSTSPERRLPMRHVCDALHRIVI 718
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6465061 6467906 - Conep19aG0083100.1 Cone19ag0808 459245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0808 718 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Cone19ag0808 718 PANTHER OS05G0588300 PROTEIN 162 716 IPR050994 -
Cone19ag0808 718 MobiDBLite consensus disorder prediction 281 308 - -
Cone19ag0808 718 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0808 718 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515(InterPro)
Cone19ag0808 718 Pfam Leucine Rich Repeat 218 236 IPR001611 GO:0005515(InterPro)
Cone19ag0808 718 Pfam Leucine Rich Repeat 141 162 IPR001611 GO:0005515(InterPro)
Cone19ag0808 718 Pfam Leucine Rich Repeat 117 138 IPR001611 GO:0005515(InterPro)
Cone19ag0808 718 Pfam Leucine Rich Repeat 165 185 IPR001611 GO:0005515(InterPro)
Cone19ag0808 718 SUPERFAMILY L domain-like 27 279 - -
Cone19ag0808 718 Gene3D Phosphorylase Kinase; domain 1 379 486 - -
Cone19ag0808 718 MobiDBLite consensus disorder prediction 279 316 - -
Cone19ag0808 718 SUPERFAMILY Protein kinase-like (PK-like) 416 713 IPR011009 -
Cone19ag0808 718 Gene3D Transferase(Phosphotransferase) domain 1 487 718 - -
Cone19ag0808 718 Pfam Protein kinase domain 417 710 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0808 718 FunFam Leucine-rich repeat receptor-like protein kinase 394 486 - -
Cone19ag0808 718 ProSiteProfiles Protein kinase domain profile. 411 717 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0808 718 SMART serkin_6 416 717 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0808 718 Pfam Leucine rich repeat N-terminal domain 24 65 IPR013210 -
Cone19ag0808 718 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 24 184 - -
Cone19ag0808 718 Gene3D Ribonuclease Inhibitor 24 183 IPR032675 -
Cone19ag0808 718 Gene3D Ribonuclease Inhibitor 184 284 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag1137 Cone-Chr13:9007123 Cone19ag0808 Cone-Chr19:6465061 4.89E-122 dispersed
Cone19ag0808 Cone-Chr19:6465061 Cone19ag1118 Cone-Chr19:8033697 1.53E-120 dispersed
Cone13ag0803 Cone-Chr13:7406610 Cone19ag0808 Cone-Chr19:6465061 0 wgd
Cone16ag0554 Cone-Chr16:7466643 Cone19ag0808 Cone-Chr19:6465061 1.12E-113 wgd
Cone19ag0808 Cone-Chr19:6465061 Cone2ag0444 Cone-Chr2:2392127 2.45E-84 wgd
Cone19ag0808 Cone-Chr19:6465061 Cone6ag0425 Cone-Chr6:2063811 1.25E-237 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82392 None None None None Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0808 - - - 0.0