Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0817 ATGGGGTCGAGAGAAGGAGGGCGGCGTCATCATAATCTGGTACCTCTTGCTGCTTTGATTAGTAAAGAGATGAAGTCTGAGAGGATGGAGAAGCCCACTGTAAGATATGGTAGTGCTGCTCAGTCTAAGAAAGGCGAGGATTATTTCCTCGTTAAAACTGATTGTCTAAGGGTTCCTGGAAATTCTTCATCCAGCTTTTGCATATTTGCGATATTTGATGGGCATAATGGGAAAGCTGCGGCTGCTTTTACCCGGGAAAATTTGTTGAGTCATGTACTCGGAGCTACTCCTCGTGACCTTGGAAGGGAGGAGTGGCTGCAAGCCTTACCTCGAGCATTGGTTGCCGGATTTGTGAAAACTGACAAGGAATTTCAGAGCAGAGGAGAAACTTCTGGAACCACAGCAACATTTGTAATAGTTGATGGATGGACTGTTACAGTAGCATCAGTTGGAGATTCTCGTTGTATCTTAGATATTCAAGGTGGTGCTGTTTCCACTTTAACAGTTGATCATAGACTTGAAGAAAATGCTGAGGAGAGGGAACGGGTTACTGCAAGCGGAGGGGAAGTTGGAAGGCTTAGCATTGTGGGCGGTGCAGAGATCGGTCCTCTACGATGTTGGCCAGGGGGTTTATGCCTTTCTAGATCCATAGGGGATATGGATGTTGGAGAGTTCATCGTTCCAATACCCTATGTTAAACAAGTCAAGCTATCAAACAATGGAGGAAGGCTTATAATCGCTTCTGATGGCATTTGGGACGCACTACCCTCGGAAATGGCCGCAAAATCCTGCCGTGGTTTACCAGCAGAACTTGCTGCTAGACAAGTTGTCAAGGAAGCACTAAGGTCAAGAGGATTAAAGGACGACACAACCTGCATAGTTGTTGACATAATCCCGCCTGAAATTCCACCTCAGCAGCCTCCTTCGCCCCCTCCAAAAAAGCCCAACAGACTTAAAGCCCTGTTTTCCCGCAAAAAATCTTGTGATTCTGCTAATAAGCTTTCAGCTGTAGGGATAGTAGAGGAGTTATTCGAAGAAGGCTCGGCAATGCTTGCGGAAAGGCTTGGAAGTGATGAATTTACCGGGCAGTCAACTTCTGGACTGTTTGTTTGTGCTGTGTGCCAAGTAGACCTTGCTCCGAGCGAGGGCATCTCGGTCCATGCGGGTTCCATCTTCTCAATGAGTTCAAAGCCGTGGCAAGGACCGTTCCTTTGTACGGATTGCAGGAACAAGAAGGATGCCATGGAAGGAAAACGCCCAAGCGGGGTCAAAGTGGTTTAA 1281 47.23 MGSREGGRRHHNLVPLAALISKEMKSERMEKPTVRYGSAAQSKKGEDYFLVKTDCLRVPGNSSSSFCIFAIFDGHNGKAAAAFTRENLLSHVLGATPRDLGREEWLQALPRALVAGFVKTDKEFQSRGETSGTTATFVIVDGWTVTVASVGDSRCILDIQGGAVSTLTVDHRLEENAEERERVTASGGEVGRLSIVGGAEIGPLRCWPGGLCLSRSIGDMDVGEFIVPIPYVKQVKLSNNGGRLIIASDGIWDALPSEMAAKSCRGLPAELAARQVVKEALRSRGLKDDTTCIVVDIIPPEIPPQQPPSPPPKKPNRLKALFSRKKSCDSANKLSAVGIVEELFEEGSAMLAERLGSDEFTGQSTSGLFVCAVCQVDLAPSEGISVHAGSIFSMSSKPWQGPFLCTDCRNKKDAMEGKRPSGVKVV 426
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6502440 6505713 + Conep19aG0084000.1 Cone19ag0817 459254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0817 426 FunFam probable protein phosphatase 2C 5 35 302 - -
Cone19ag0817 426 CDD PP2Cc 43 296 IPR001932 -
Cone19ag0817 426 SMART PP2C_4 25 295 IPR001932 -
Cone19ag0817 426 SMART PP2C_SIG_2 51 297 IPR001932 -
Cone19ag0817 426 SUPERFAMILY PP2C-like 34 297 IPR036457 -
Cone19ag0817 426 PANTHER PROTEIN PHOSPHATASE 27 296 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone19ag0817 426 ProSiteProfiles PPM-type phosphatase domain profile. 28 297 IPR001932 -
Cone19ag0817 426 Gene3D - 33 301 IPR036457 -
Cone19ag0817 426 Pfam Protein phosphatase 2C 61 282 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0817 Cone-Chr19:6502440 Cone1ag1537 Cone-Chr1:57335055 2.55E-210 dispersed
Cone13ag0811 Cone-Chr13:7450088 Cone19ag0817 Cone-Chr19:6502440 2.80E-291 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0817 - - - 0.0