Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0818 ATGTCAAAACCTGTTCTTCTCATCTTCACAAATTTCGTTTTCGCTTTACTTTTCCTCCATTTCTGCCCCCTCCAAGCAGCTCCTTCTTCTTCTTCTTCTCATCCAGATTTCCAGCCATTAATGGCGTTCAGAGTATCTTCCGACGCAAACAAAAAGCTCACCGCCTGGAACTCAACCTCCGACCCATGCACCTGGACCGGAGTGACCTGTCTGAGAAACCGAGTCTCCAGACTCGTCCTCGAAAACCTCGGCTTAACCGGCTCAATCGAACCGCTTACATCTCTAACTCAGCTTCGGGCCTTAAGCCTCAAGAACAACAAACACTCTGGACCCATTCCGGATCTCTCCAACTTCACAGCCTTAAAGCTCTTGTTCCTCTCCCACAACGACTTTTCCGGCGATTTTCCGGCCACCGTCACTTCCTTCTTCCGTCTCTACCGTCTCGATCTATCCTACAACAACTTCTCCGGCGAGATTCCTGTCACGGTCAACCGTTTGACTCACCTCCTCACCCTTCGGCTCGAATCGAACCGGTTCACTGGTCCAATATCAAACCTCAACTTCCCGAACCTTCAAGACCTCAATGTGACCGGAAACCGCCTCTCCGGTCAAATCCCTAAGTCCCTATCTGGTTTTTCCGACTCATCTTTCGGGCAAAATCCGGACCTCTGCGGGTCCCCCTTACCCGCCTGCAAAAGCCTAGGAATTGACCCGACTAAGCCCGGATCCGACGGAGTAGCTATAGCTTCACCTGTCGTAGCATCTTCTCCAAGCTCACTCCCTTCCATCACATCACCAAAAAAACCGTCGAGTCCACGTCAGCATAATACGTCCGCAAAGATCACCCCTCTAGCCCTGATCGCCATAATCCTCGGCGATATATTAGTCCTCGTGGTCGTCTCTCTTCTTCTCTACTGCTACTTTTGGAAAAACTCCACCACCAAGAGTGGGCCCCACGACAAGGGCCCCACGTTGAAGCCACTCTCCCAGAGCGAGAAGATCGTCTACTCGTCGAGCCCGTATGGCGGGACCCAGCCGGGGTTTGACCGGGGTCAGATGGTGTTCTTCGAGGGGGTGAAGAGGTTCGAGCTGGAGGACTTGCTTCGAGCCTCAGCTGAGATGCTCGGTAAAGGCGGGTTTGGGACGGCGTATAAGGCGGTGCTGGACGATGGGAATGTGGTGGCAGTTAAGAGATTGAAAGATGCCCAGATTGGTGGGAAGAGAGATTTTGAACAGCATATGGAGGTTTTAGGCAAATTGAACCATCAGAATATTGTTAGCTTTAGAGCTTATTATTTTGCCCGAGAAGAGAAGCTTTTGGTCTATGAGTTCATGCCTAATGGAAGCTTGTTCTGGCTTCTTCACGGTAACCGAGGCCCAGGAAGAACCCCACTGGATTGGACAACTCGGCTTAGAATCGCATCTGGAGCGGCTCAAGGCTTATCTTTTATCCACAACTCATGCAAGTCCCTTAAACTCACCCACGGTAACATCAAATCCACGAACATCCTCCTTGACCGAGTGGGCAATGCCCGAGTATCCGACTTCGGACTATCTACTTTTTCCCACCCAACCTCCTCCTCCCCACGATCCAGTGGCTACCGTGCTCCCGAGTCATCTGACGGTCGAAAGCTGACTCAGAAATCCGACGTGTACTCTTTTGGTGTTCTCCTGTTGGAGATACTGACGGGGAAGTGCCCTTCCGATGTGGATAATGGCGGGGCAGGGAACGGGTATGGTGGTGGGGTCGTGGACCTACCTAGGTGGGTACAGTCCGTGGTCAGAGAGGAATGGACGGCTGAGGTTTTCGATTTGGAGTTGATGAGGTATAGGGATATTGAGGAGGAGATGGTGAGGATGTTGCAAATAGCTATGACTTGTACTTCTGTTAGTCCTGATCAACGGCCAAGAATGAGCCAGGTGGTCAAGATGATCGAGGAGATTCGCGGTGTCGAGAGTCTCGAGACAGATGGGGTTGTCTCGATGTCTGATTCGCCGTCCATGTCAGATGACACGCGTCGTGCGGAGCCCGATAGTGATCAGTGA 2046 51.86 MSKPVLLIFTNFVFALLFLHFCPLQAAPSSSSSHPDFQPLMAFRVSSDANKKLTAWNSTSDPCTWTGVTCLRNRVSRLVLENLGLTGSIEPLTSLTQLRALSLKNNKHSGPIPDLSNFTALKLLFLSHNDFSGDFPATVTSFFRLYRLDLSYNNFSGEIPVTVNRLTHLLTLRLESNRFTGPISNLNFPNLQDLNVTGNRLSGQIPKSLSGFSDSSFGQNPDLCGSPLPACKSLGIDPTKPGSDGVAIASPVVASSPSSLPSITSPKKPSSPRQHNTSAKITPLALIAIILGDILVLVVVSLLLYCYFWKNSTTKSGPHDKGPTLKPLSQSEKIVYSSSPYGGTQPGFDRGQMVFFEGVKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDAQIGGKRDFEQHMEVLGKLNHQNIVSFRAYYFAREEKLLVYEFMPNGSLFWLLHGNRGPGRTPLDWTTRLRIASGAAQGLSFIHNSCKSLKLTHGNIKSTNILLDRVGNARVSDFGLSTFSHPTSSSPRSSGYRAPESSDGRKLTQKSDVYSFGVLLLEILTGKCPSDVDNGGAGNGYGGGVVDLPRWVQSVVREEWTAEVFDLELMRYRDIEEEMVRMLQIAMTCTSVSPDQRPRMSQVVKMIEEIRGVESLETDGVVSMSDSPSMSDDTRRAEPDSDQ 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6511086 6514421 + Conep19aG0084100.1 Cone19ag0818 459255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0818 681 Gene3D Transferase(Phosphotransferase) domain 1 445 663 - -
Cone19ag0818 681 SUPERFAMILY Protein kinase-like (PK-like) 373 646 IPR011009 -
Cone19ag0818 681 Pfam Leucine Rich Repeat 145 164 IPR001611 GO:0005515(InterPro)
Cone19ag0818 681 Pfam Leucine Rich Repeat 190 211 IPR001611 GO:0005515(InterPro)
Cone19ag0818 681 Pfam Protein tyrosine and serine/threonine kinase 373 644 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone19ag0818 681 CDD STKc_IRAK 375 648 - -
Cone19ag0818 681 MobiDBLite consensus disorder prediction 655 681 - -
Cone19ag0818 681 MobiDBLite consensus disorder prediction 521 544 - -
Cone19ag0818 681 Gene3D Ribonuclease Inhibitor 190 231 IPR032675 -
Cone19ag0818 681 FunFam Nuclear pore complex protein NUP107 34 185 - -
Cone19ag0818 681 PANTHER OS05G0588300 PROTEIN 14 656 IPR050994 -
Cone19ag0818 681 Pfam Leucine rich repeat N-terminal domain 35 70 IPR013210 -
Cone19ag0818 681 MobiDBLite consensus disorder prediction 253 276 - -
Cone19ag0818 681 SUPERFAMILY L domain-like 54 212 - -
Cone19ag0818 681 ProSitePatterns Protein kinases ATP-binding region signature. 375 397 IPR017441 GO:0005524(InterPro)
Cone19ag0818 681 Gene3D Ribonuclease Inhibitor 38 184 IPR032675 -
Cone19ag0818 681 Gene3D Phosphorylase Kinase; domain 1 349 444 - -
Cone19ag0818 681 FunFam pollen receptor-like kinase 1 342 444 - -
Cone19ag0818 681 MobiDBLite consensus disorder prediction 521 535 - -
Cone19ag0818 681 ProSiteProfiles Protein kinase domain profile. 369 648 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone19ag0818 681 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 445 657 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0818 Cone-Chr19:6511086 Cone19ag1206 Cone-Chr19:8418148 3.37E-124 dispersed
Cone2ag0891 Cone-Chr2:34789555 Cone19ag0818 Cone-Chr19:6511086 5.94E-58 dispersed
Cone13ag0812 Cone-Chr13:7457178 Cone19ag0818 Cone-Chr19:6511086 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82395 PF00400 WD40 5.20E-06 CL0186 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0818 - - - 0.0