Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone19ag0834 ATGAGGATGAGTTGCAATGGCTGCAGAATTCTCCGCAAAGGCTGCACCGATGACTGTGTCATCCGACCCTGCCTCCAGTGGCTCCCGTCCTCTGATTCTCAAGCCAACGCCACCCTTTTCCTCGCCAAGTTCTATGGCCGTGCTGGCCTCCTCAACCTCCTCACCGCGGGCCCTGAGCACCGTCGTCCCGAGATTTTCAAGTCACTGCTACATGAGGCTTGTGGGCGGATCGTGAATCCGGTAAACGGTGCTTTGGGTTTGCTCTCGGCTGGAAAATGGGACCGATGTCAAGCGGCGGTTGATGCGGTTATCATGGGATTGACAGTCACGACCGACGACGACGTCGACGGCGATGCACCTTCACCGCAAGCTGACTTTGCTCTCAGAAACGGCGACGTTCGCCATGCGATGAAGGAGGTCGGATTGGCTAATATGACTCCTAACAAGAAGGCGAGACGGTCTCGAGCTACGTCGGGTGATGATGTGGCTGGTTCCGGCAATACCAGGTGGGCCAGGCTTTCCCCGGAGGATTTCATTCGGGGATTGACAGTGGGGATGGACCGAAATCAAGAAGAGACCGGGCTTTTTTCTGAAACTAAGGGGGCTGCATTGGCCAACCAGTACAAGCCGGACCGTGTCCTAAAGTTATTTGATGATGGGTTGGACTTGACTCTCGGATAG 681 55.65 MRMSCNGCRILRKGCTDDCVIRPCLQWLPSSDSQANATLFLAKFYGRAGLLNLLTAGPEHRRPEIFKSLLHEACGRIVNPVNGALGLLSAGKWDRCQAAVDAVIMGLTVTTDDDVDGDAPSPQADFALRNGDVRHAMKEVGLANMTPNKKARRSRATSGDDVAGSGNTRWARLSPEDFIRGLTVGMDRNQEETGLFSETKGAALANQYKPDRVLKLFDDGLDLTLG 226
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
19 6592100 6592872 + Conep19aG0085700.1 Cone19ag0834 459271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone19ag0834 226 MobiDBLite consensus disorder prediction 147 167 - -
Cone19ag0834 226 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Cone19ag0834 226 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Cone19ag0834 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 224 - GO:0010468(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone13ag0286 Cone-Chr13:2136062 Cone19ag0834 Cone-Chr19:6592100 1.33E-53 dispersed
Cone19ag0280 Cone-Chr19:2004222 Cone19ag0834 Cone-Chr19:6592100 4.33E-52 dispersed
Cone19ag0834 Cone-Chr19:6592100 Cone6ag1448 Cone-Chr6:11584182 2.47E-45 dispersed
Cone11ag0317 Cone-Chr11:1550023 Cone19ag0834 Cone-Chr19:6592100 4.39E-53 wgd
Cone13ag0829 Cone-Chr13:7525201 Cone19ag0834 Cone-Chr19:6592100 7.08E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
45333 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone19ag0834 - - - 0.0